MicroRNA-mediated regulation of gene expression in the response of rice plants to fungal elicitors

Small RNA profiling reveals regulation of Arabidopsis miR168 and heterochromatic siRNA415 in response to fungal elicitors

(2014) Patricia Baldrich et al.   BMC GENOMICS

miRNAs in the crosstalk between phytohormone signalling pathways

(2014) J. Curaba et al.   JOURNAL OF EXPERIMENTAL BOTANY

Growth–Defense Tradeoffs in Plants: A Balancing Act to Optimize Fitness

(2014) Bethany Huot et al.   Molecular Plant

Emerging evidence for functional peptides encoded by short open reading frames

(2014) Shea J. Andrews et al.   NATURE REVIEWS GENETICS

Identification and characterization of microRNAs in oilseed rape (Brassica napus) responsive to infection with the pathogenic fungusVerticillium longisporumusingBrassicaAA (Brassica rapa) and CC (Brassica oleracea) as reference genomes

(2014) Dan Shen et al.   NEW PHYTOLOGIST

MicroRNA400-Guided Cleavage of Pentatricopeptide Repeat Protein mRNAs Renders Arabidopsis thaliana More Susceptible to Pathogenic Bacteria and Fungi

(2014) Young Ju Park et al.   PLANT AND CELL PHYSIOLOGY

Sucrose and invertases, a part of the plant defense response to the biotic stresses

(2014) Alexandra S. Tauzin et al.   Frontiers in Plant Science

Classification and Comparison of Small RNAs from Plants

(2013) Michael J. Axtell   Annual Review of Plant Biology

Transgenic expression of plant chitinases to enhance disease resistance

(2013) Jean Cletus et al.   BIOTECHNOLOGY LETTERS

The role of rice microRNAs in abiotic stress responses

(2013) Dong-Hoon Jeong et al.   JOURNAL OF PLANT BIOLOGY

Recent Progress in Understanding PAMP- and Effector-Triggered Immunity against the Rice Blast Fungus Magnaporthe oryzae

(2013) Wende Liu et al.   Molecular Plant

Cloning and Characterization of miRNAs and Their Targets, Including a Novel miRNA-Targeted NBS–LRR Protein Class Gene in Apple (Golden Delicious)

(2013) Chao Ma et al.   Molecular Plant

Overexpression of microRNA OsmiR397 improves rice yield by increasing grain size and promoting panicle branching

(2013) Yu-Chan Zhang et al.   NATURE BIOTECHNOLOGY

Identification of a novel microRNA (miRNA) from rice that targets an alternatively spliced transcript of theNramp6(Natural resistance-associated macrophage protein 6) gene involved in pathogen resistance

(2013) Sonia Campo et al.   NEW PHYTOLOGIST

miRBase: annotating high confidence microRNAs using deep sequencing data

(2013) Ana Kozomara et al.   NUCLEIC ACIDS RESEARCH

Multiple Rice MicroRNAs Are Involved in Immunity against the Blast Fungus Magnaporthe oryzae

(2013) Y. Li et al.   PLANT PHYSIOLOGY

Dynamics and biological relevance of DNA demethylation in Arabidopsis antibacterial defense

(2013) A. Yu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Disease resistance or growth: the role of plant hormones in balancing immune responses and fitness costs

(2013) Nicolas Denancé et al.   Frontiers in Plant Science

Long-distance communication and signal amplification in systemic acquired resistance

(2013) Jyoti Shah et al.   Frontiers in Plant Science

Small RNAs in plant defense responses during viral and bacterial interactions: similarities and differences

(2013) Pablo Peláez et al.   Frontiers in Plant Science

Small RNAs in development – insights from plants

(2012) Xuemei Chen   CURRENT OPINION IN GENETICS & DEVELOPMENT

The Top 10 fungal pathogens in molecular plant pathology

(2012) RALPH DEAN et al.   MOLECULAR PLANT PATHOLOGY

Control of grain size, shape and quality by OsSPL16 in rice

(2012) Shaokui Wang et al.   NATURE GENETICS

Emerging role for RNA-based regulation in plant immunity

(2012) Dorothee Staiger et al.   NEW PHYTOLOGIST

PAREsnip: a tool for rapid genome-wide discovery of small RNA/target interactions evidenced through degradome sequencing

(2012) Leighton Folkes et al.   NUCLEIC ACIDS RESEARCH

A MicroRNA Superfamily Regulates Nucleotide Binding Site-Leucine-Rich Repeats and Other mRNAs

(2012) P. V. Shivaprasad et al.   PLANT CELL

Tissue-Specific Silencing of Arabidopsis SU(VAR)3-9 HOMOLOG8 by miR171a

(2012) P. A. Manavella et al.   PLANT PHYSIOLOGY

The Arabidopsis MicroRNA396-GRF1/GRF3 Regulatory Module Acts as a Developmental Regulator in the Reprogramming of Root Cells during Cyst Nematode Infection

(2012) T. Hewezi et al.   PLANT PHYSIOLOGY

Widespread dynamic DNA methylation in response to biotic stress

(2012) R. H. Dowen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Functions of microRNAs in plant stress responses

(2012) Ramanjulu Sunkar et al.   TRENDS IN PLANT SCIENCE

Conserved Peptide Upstream Open Reading Frames are Associated with Regulatory Genes in Angiosperms

(2012) Richard A. Jorgensen et al.   Frontiers in Plant Science

Hormonal Modulation of Plant Immunity

(2011) Corné M.J. Pieterse et al.   Annual Review of Cell and Developmental Biology

Identification of miRNAs and their target genes in developing soybean seeds by deep sequencing

(2011) Qing-Xin Song et al.   BMC PLANT BIOLOGY

MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs

(2011) J. Zhai et al.   GENES & DEVELOPMENT

Arabidopsis Argonaute 2 Regulates Innate Immunity via miRNA393∗-Mediated Silencing of a Golgi-Localized SNARE Gene, MEMB12

(2011) Xiaoming Zhang et al.   MOLECULAR CELL

Evolution and Functional Diversification ofMIRNAGenes

(2011) Josh T. Cuperus et al.   PLANT CELL

The RNA Silencing Enzyme RNA Polymerase V Is Required for Plant Immunity

(2011) Ana López et al.   PLoS Genetics

Role of Small RNAs in Host-Microbe Interactions

(2010) Surekha Katiyar-Agarwal et al.   Annual Review of Phytopathology

DNA Methylation Mediated by a MicroRNA Pathway

(2010) Liang Wu et al.   MOLECULAR CELL

Perspectives on Remorin Proteins, Membrane Rafts, and Their Role During Plant–Microbe Interactions

(2010) Iris K. Jarsch et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Transcriptome-wide identification of microRNA targets in rice

(2010) Yong-Fang Li et al.   PLANT JOURNAL

Identification of grapevine microRNAs and their targets using high-throughput sequencing and degradome analysis

(2010) Vitantonio Pantaleo et al.   PLANT JOURNAL

Identification of MicroRNAs Involved in Pathogen-Associated Molecular Pattern-Triggered Plant Innate Immunity

(2010) Y. Li et al.   PLANT PHYSIOLOGY

miRNAs in the biogenesis of trans-acting siRNAs in higher plants

(2010) Edwards Allen et al.   SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY

Roles of Plant Small RNAs in Biotic Stress Responses

(2009) Virginia Ruiz-Ferrer et al.   Annual Review of Plant Biology

Origin, Biogenesis, and Activity of Plant MicroRNAs

(2009) Olivier Voinnet   CELL

Diurnal oscillation in the accumulation ofArabidopsismicroRNAs, miR167, miR168, miR171 and miR398

(2009) Christelle Siré et al.   FEBS LETTERS

Constitutive Expression ofOsGH3.1Reduces Auxin Content and Enhances Defense Response and Resistance to a Fungal Pathogen in Rice

(2009) Concha Domingo et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Construction of Parallel Analysis of RNA Ends (PARE) libraries for the study of cleaved miRNA targets and the RNA degradome

(2009) Marcelo A German et al.   Nature Protocols

Under pressure: investigating the biology of plant infection by Magnaporthe oryzae

(2009) Richard A. Wilson et al.   NATURE REVIEWS MICROBIOLOGY

Cloning and characterization of small RNAs from Medicago truncatula reveals four novel legume-specific microRNA families

(2009) Guru Jagadeeswaran et al.   NEW PHYTOLOGIST

Endogenous siRNA and miRNA Targets Identified by Sequencing of the Arabidopsis Degradome

(2008) Charles Addo-Quaye et al.   CURRENT BIOLOGY

RNA silencing is required for Arabidopsis defence against Verticillium wilt disease

(2008) Ursula Ellendorff et al.   JOURNAL OF EXPERIMENTAL BOTANY

Viral Genome Methylation as an Epigenetic Defense against Geminiviruses

(2008) P. Raja et al.   JOURNAL OF VIROLOGY

Repression of the Auxin Response Pathway Increases Arabidopsis Susceptibility to Necrotrophic Fungi

(2008) Francisco Llorente et al.   Molecular Plant

Criteria for Annotation of Plant MicroRNAs

(2008) B. C. Meyers et al.   PLANT CELL

Widespread Translational Inhibition by Plant miRNAs and siRNAs

(2008) P. Brodersen et al.   SCIENCE

Suppression of the MicroRNA Pathway by Bacterial Effector Proteins

(2008) L. Navarro et al.   SCIENCE