RNA-binding proteins in eye development and disease: implication of conserved RNA granule components

Fragile X Mental Retardation Protein expression in the retina is regulated by light

(2016) E.M. Guimarães-Souza et al.   EXPERIMENTAL EYE RESEARCH

The impact of microRNA gene regulation on the survival and function of mature cell types in the eye

(2016) Thomas R. Sundermeier et al.   FASEB JOURNAL

Unfolded-protein response–associated stabilization of p27(Cdkn1b) interferes with lens fiber cell denucleation, leading to cataract

(2016) Lei Lyu et al.   FASEB JOURNAL

The Clothes Make the mRNA: Past and Present Trends in mRNP Fashion

(2015) Guramrit Singh et al.   Annual Review of Biochemistry

PIWI-Interacting RNA: Its Biogenesis and Functions

(2015) Yuka W. Iwasaki et al.   Annual Review of Biochemistry

Prox1 and fibroblast growth factor receptors form a novel regulatory loop controlling lens fiber differentiation and gene expression

(2015) Dylan S. Audette et al.   DEVELOPMENT

Deficiency of the RNA binding protein caprin2 causes lens defects and features of peters anomaly

(2015) Soma Dash et al.   DEVELOPMENTAL DYNAMICS

Molecular characterization of mouse lens epithelial cell lines and their suitability to study RNA granules and cataract associated genes

(2015) Anne M. Terrell et al.   EXPERIMENTAL EYE RESEARCH

Interaction and colocalization of HERMES/RBPMS with NonO, PSF, and G3BP1 in neuronal cytoplasmic RNP granules in mouse retinal line cells

(2015) Mari T. Furukawa et al.   GENES TO CELLS

Regulation of Notch Signaling by an Evolutionary Conserved DEAD Box RNA Helicase, Maheshvara in Drosophila melanogaster

(2015) S. Surabhi et al.   GENETICS

Compound mouse mutants of bZIP transcription factors Mafg and Mafk reveal a regulatory network of non-crystallin genes associated with cataract

(2015) Smriti A. Agrawal et al.   HUMAN GENETICS

RNA Toxicity and Missplicing in the Common Eye Disease Fuchs Endothelial Corneal Dystrophy

(2015) Jintang Du et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

The human RBPome: From genes and proteins to human disease

(2015) Yaseswini Neelamraju et al.   Journal of Proteomics

Musashi-1 maintains blood–testis barrier structure during spermatogenesis and regulates stress granule formation upon heat stress

(2015) Sun ErLin et al.   MOLECULAR BIOLOGY OF THE CELL

Identification ofin vivoDNA-binding mechanisms of Pax6 and reconstruction of Pax6-dependent gene regulatory networks during forebrain and lens development

(2015) Jian Sun et al.   NUCLEIC ACIDS RESEARCH

Micro-RNAs and Their Roles in Eye Disorders

(2015) Azhwar Raghunath et al.   OPHTHALMIC RESEARCH

Database of RNA binding protein expression and disease dynamics (READ DB)

(2015) Seyedsasan Hashemikhabir et al.   Database-The Journal of Biological Databases and Curation

The RNA Binding Protein Igf2bp1 Is Required for Zebrafish RGC Axon Outgrowth In Vivo

(2015) John A. Gaynes et al.   PLoS One

Remote Control of Gene Function by Local Translation

(2014) Hosung Jung et al.   CELL

The cellular and molecular mechanisms of vertebrate lens development

(2014) A. Cvekl et al.   DEVELOPMENT

RBM24 Is a Major Regulator of Muscle-Specific Alternative Splicing

(2014) Jiwen Yang et al.   DEVELOPMENTAL CELL

Genetic link between Cabeza, a Drosophila homologue of Fused in Sarcoma (FUS), and the EGFR signaling pathway

(2014) Mai Shimamura et al.   EXPERIMENTAL CELL RESEARCH

The RNA-binding protein Rumpelstiltskin antagonizes gypsy chromatin insulator function in a tissue-specific manner

(2014) M. R. King et al.   JOURNAL OF CELL SCIENCE

Newborn Mouse Lens Proteome and Its Alteration by Lysine 6 Mutant Ubiquitin

(2014) Fu Shang et al.   JOURNAL OF PROTEOME RESEARCH

The RNA-binding protein Rbm24 is transiently expressed in myoblasts and is required for myogenic differentiation during vertebrate development

(2014) Raphaëlle Grifone et al.   MECHANISMS OF DEVELOPMENT

Eye development

(2014) Nicholas E. Baker et al.   METHODS

Quantitative Proteomics Reveals Dynamic Interaction of c-Jun N-terminal Kinase (JNK) with RNA Transport Granule Proteins Splicing Factor Proline- and Glutamine-rich (Sfpq) and Non-POU Domain-containing Octamer-binding Protein (Nono) during Neuronal Differentiation

(2014) Matthias D. Sury et al.   MOLECULAR & CELLULAR PROTEOMICS

Principles and Properties of Eukaryotic mRNPs

(2014) Sarah F. Mitchell et al.   MOLECULAR CELL

A census of human RNA-binding proteins

(2014) Stefanie Gerstberger et al.   NATURE REVIEWS GENETICS

Regulation of microRNA biogenesis

(2014) Minju Ha et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Stress granules are dispensable for mRNA stabilization during cellular stress

(2014) Nadine Bley et al.   NUCLEIC ACIDS RESEARCH

CERKL, a Retinal Disease Gene, Encodes an mRNA-Binding Protein That Localizes in Compact and Untranslated mRNPs Associated with Microtubules

(2014) Alihamze Fathinajafabadi et al.   PLoS One

Rbm24a and Rbm24b Are Required for Normal Somitogenesis

(2014) Samantha Maragh et al.   PLoS One

mRNP granules

(2014) J Ross Buchan   RNA Biology

An atlas of chromatoid body components

(2014) O. Meikar et al.   RNA

Post-transcriptional RNA regulons affecting cell cycle and proliferation

(2014) Jeff G. Blackinton et al.   SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY

Ocular stem cells: a status update!

(2014) Kamesh Dhamodaran et al.   Stem Cell Research & Therapy

The splicing regulator PTBP2 controls a program of embryonic splicing required for neuronal maturation

(2014) Qin Li et al.   eLife

SCRIB and PUF60 Are Primary Drivers of the Multisystemic Phenotypes of the 8q24.3 Copy-Number Variant

(2013) Andrew Dauber et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Subcellular localization and RNP formation of IGF2BPs (IGF2 mRNA-binding proteins) is modulated by distinct RNA-binding domains

(2013) Kristin Wächter et al.   BIOLOGICAL CHEMISTRY

Whole-genome copy number variation analysis in anophthalmia and microphthalmia

(2013) KF Schilter et al.   CLINICAL GENETICS

Genetics of human cataract

(2013) A Shiels et al.   CLINICAL GENETICS

Mechanisms coordinating ELAV/Hu mRNA regulons

(2013) Laura E Simone et al.   CURRENT OPINION IN GENETICS & DEVELOPMENT

Diversity and conservation of CELF1 and CELF2 RNA and protein expression patterns during embryonic development

(2013) Y. Blech-Hermoni et al.   DEVELOPMENTAL DYNAMICS

RNA-binding protein Vg1RBP regulates terminal arbor formation but not long-range axon navigation in the developing visual system

(2013) Adrianna Kalous et al.   Developmental Neurobiology

The pathogenesis of keratoconus

(2013) A E Davidson et al.   EYE

Poly(ADP-ribose) glycohydrolase and poly(ADP-ribose)-interacting protein Hrp38 regulate pattern formation during Drosophila eye development

(2013) Yingbiao Ji et al.   GENE

RNA binding mediates neurotoxicity in the transgenic Drosophila model of TDP-43 proteinopathy

(2013) Ryoko Ihara et al.   HUMAN MOLECULAR GENETICS

mRNA cycles through hypoxia-induced stress granules in live Drosophila embryonic muscles

(2013) Annelies M.A. van der Laan et al.   INTERNATIONAL JOURNAL OF DEVELOPMENTAL BIOLOGY

The RNA binding protein RBPMS is a selective marker of ganglion cells in the mammalian retina

(2013) Allen R. Rodriguez et al.   JOURNAL OF COMPARATIVE NEUROLOGY

RNA-Binding Protein Hermes/RBPMS Inversely Affects Synapse Density and Axon Arbor Formation in Retinal Ganglion Cells In Vivo

(2013) H. Hornberg et al.   JOURNAL OF NEUROSCIENCE

Loss of Sip1 leads to migration defects and retention of ectodermal markers during lens development

(2013) Abby L. Manthey et al.   MECHANISMS OF DEVELOPMENT

Long non-coding RNAs: new players in cell differentiation and development

(2013) Alessandro Fatica et al.   NATURE REVIEWS GENETICS

Histone posttranslational modifications and cell fate determination: lens induction requires the lysine acetyltransferases CBP and p300

(2013) Louise Wolf et al.   NUCLEIC ACIDS RESEARCH

Pax6 Interactions with Chromatin and Identification of Its Novel Direct Target Genes in Lens and Forebrain

(2013) Qing Xie et al.   PLoS One

Expression Analysis of an Evolutionarily Conserved Alternative Splicing Factor, Sfrs10, in Age-Related Macular Degeneration

(2013) Devi Krishna Priya Karunakaran et al.   PLoS One

Translation initiation factor eIF3h targets specific transcripts to polysomes during embryogenesis

(2013) A. Choudhuri et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

RNA-binding proteins in Mendelian disease

(2013) Alfredo Castello et al.   TRENDS IN GENETICS

Deprivation Amblyopia and Congenital Hereditary Cataract

(2013) Behzad Mansouri et al.   Seminars in Ophthalmology

Interactome of Two Diverse RNA Granules Links mRNA Localization to Translational Repression in Neurons

(2013) Renate Fritzsche et al.   Cell Reports

Identification and Characterization of FGF2-Dependent mRNA: microRNA Networks During Lens Fiber Cell Differentiation

(2013) Louise Wolf et al.   G3-Genes Genomes Genetics

The RNA-binding Proteins FMR1, Rasputin and Caprin Act Together with the UBA Protein Lingerer to Restrict Tissue Growth in Drosophila melanogaster

(2013) Roland Baumgartner et al.   PLoS Genetics

Pax6 Regulates Gene Expression in the Vertebrate Lens through miR-204

(2013) Ohad Shaham et al.   PLoS Genetics

RNA-binding protein RBM24 is required for sarcomere assembly and heart contractility

(2012) Kar Lai Poon et al.   CARDIOVASCULAR RESEARCH

Insights into RNA Biology from an Atlas of Mammalian mRNA-Binding Proteins

(2012) Alfredo Castello et al.   CELL

An Asymmetrically Localized Staufen2-Dependent RNA Complex Regulates Maintenance of Mammalian Neural Stem Cells

(2012) John P. Vessey et al.   Cell Stem Cell

Parallels between neuron and lens fiber cell structure and molecular regulatory networks

(2012) Peter H. Frederikse et al.   DEVELOPMENTAL BIOLOGY

Muscleblind, BSF and TBPH are mislocalized in the muscle sarcomere of a Drosophila myotonic dystrophy model

(2012) B. Llamusi et al.   Disease Models & Mechanisms

Expression and localization of CERKL in the mammalian retina, its response to light-stress, and relationship with NeuroD1 gene

(2012) Nawajes A. Mandal et al.   EXPERIMENTAL EYE RESEARCH

Ptbp2 represses adult-specific splicing to regulate the generation of neuronal precursors in the embryonic brain

(2012) D. D. Licatalosi et al.   GENES & DEVELOPMENT

The RNA-binding protein Xp54nrb isolated from a Ca2+-dependent screen is expressed in neural structures during Xenopus laevis development

(2012) Isabelle Neant et al.   INTERNATIONAL JOURNAL OF DEVELOPMENTAL BIOLOGY

Heterogeneous Nuclear Ribonucleoprotein K, an RNA-Binding Protein, Is Required for Optic Axon Regeneration in Xenopus laevis

(2012) Y. Liu et al.   JOURNAL OF NEUROSCIENCE

The double-stranded RNA-binding protein Staufen 2 regulates eye size

(2012) Diane M. Cockburn et al.   MOLECULAR AND CELLULAR NEUROSCIENCE

Next generation organelles: Structure and role of germ granules in the germline

(2012) Ming Gao et al.   MOLECULAR REPRODUCTION AND DEVELOPMENT

Derivation of Human Differential Photoreceptor-like Cells from the Iris by Defined Combinations of CRX, RX and NEUROD

(2012) Yuko Seko et al.   PLoS One

Drosophila Rbp6 Is an Orthologue of Vertebrate Msi-1 and Msi-2, but Does Not Function Redundantly with dMsi to Regulate Germline Stem Cell Behaviour

(2012) Nicole A. Siddall et al.   PLoS One

Perspectives on the ARE as it turns 25 years old

(2012) Daniel Beisang et al.   Wiley Interdisciplinary Reviews-RNA

The evolution of vision

(2012) Walter J. Gehring   Wiley Interdisciplinary Reviews-Developmental Biology

Transdifferentiation from cornea to lens in Xenopus laevis depends on BMP signalling and involves upregulation of Wnt signalling

(2011) Robert C Day et al.   BMC DEVELOPMENTAL BIOLOGY

Changes in Musashi-1 subcellular localization correlate with cell cycle exit during postnatal retinal development

(2011) P.E.B. Nickerson et al.   EXPERIMENTAL EYE RESEARCH

The cell adhesion gene PVRL3 is associated with congenital ocular defects

(2011) Salil A. Lachke et al.   HUMAN GENETICS

PRPF mutations are associated with generalized defects in spliceosome formation and pre-mRNA splicing in patients with retinitis pigmentosa

(2011) Goranka Tanackovic et al.   HUMAN MOLECULAR GENETICS

Roles of the 15-kDa Selenoprotein (Sep15) in Redox Homeostasis and Cataract Development Revealed by the Analysis of Sep 15 Knockout Mice

(2011) Marina V. Kasaikina et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

miR-503 represses CUG-binding protein 1 translation by recruiting CUGBP1 mRNA to processing bodies

(2011) Yu-Hong Cui et al.   MOLECULAR BIOLOGY OF THE CELL

The lens in focus: a comparison of lens development in Drosophila and vertebrates

(2011) Mark Charlton-Perkins et al.   MOLECULAR GENETICS AND GENOMICS

Tudor domain containing 7 (Tdrd7) is essential for dynamic ribonucleoprotein (RNP) remodeling of chromatoid bodies during spermatogenesis

(2011) T. Tanaka et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mutation of the conserved polyadenosine RNA binding protein, ZC3H14/dNab2, impairs neural function in Drosophila and humans

(2011) C. Pak et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mutations in the RNA Granule Component TDRD7 Cause Cataract and Glaucoma

(2011) S. A. Lachke et al.   SCIENCE

LOTUS, a new domain associated with small RNA pathways in the germline

(2010) Isabelle Callebaut et al.   BIOINFORMATICS

OST-HTH: a novel predicted RNA-binding domain

(2010) Vivek Anantharaman et al.   Biology Direct

Evidence That ‘Brain-Specific’ Fox-1, Fox-2, and nPTB Alternatively Spliced Isoforms Are Produced in the Lens

(2010) Claudine L. Bitel et al.   CURRENT EYE RESEARCH

dFMRP and Caprin, translational regulators of synaptic plasticity, control the cell cycle at the Drosophila mid-blastula transition

(2010) O. Papoulas et al.   DEVELOPMENT

On the growth and internal structure of the human lens

(2010) Robert C. Augusteyn   EXPERIMENTAL EYE RESEARCH

Arginines of the RGG box regulate FMRP association with polyribosomes and mRNA

(2010) E. Blackwell et al.   HUMAN MOLECULAR GENETICS

RNA Granule Protein 140 (RNG140), a Paralog of RNG105 Localized to Distinct RNA Granules in Neuronal Dendrites in the Adult Vertebrate Brain

(2010) Nobuyuki Shiina et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

The RNA-binding protein Seb4/RBM24 is a direct target of MyoD and is required for myogenesis during Xenopus early development

(2010) Hong-Yan Li et al.   MECHANISMS OF DEVELOPMENT

Emerging properties of animal gene regulatory networks

(2010) Eric H. Davidson   NATURE

E2-2 Protein and Fuchs's Corneal Dystrophy

(2010) Keith H. Baratz et al.   NEW ENGLAND JOURNAL OF MEDICINE

NovelSOX2mutations and genotype–phenotype correlation in anophthalmia and microphthalmia

(2009) Adele Schneider et al.   AMERICAN JOURNAL OF MEDICAL GENETICS PART A

Ttk69-dependent repression of lozenge prevents the ectopic development of R7 cells in the Drosophila larval eye disc

(2009) Nicole A Siddall et al.   BMC DEVELOPMENTAL BIOLOGY

Pax6 is essential for lens fiber cell differentiation

(2009) O. Shaham et al.   DEVELOPMENT

Targeted deletion of Dicer disrupts lens morphogenesis, corneal epithelium stratification, and whole eye development

(2009) Yan Li et al.   DEVELOPMENTAL DYNAMICS

FGF signals induce Caprin2 expression in the vertebrate lens

(2009) Christina E. Lorén et al.   DIFFERENTIATION

Polypyrimidine tract-binding protein is essential for early mouse development and embryonic stem cell proliferation

(2009) Masaki Shibayama et al.   FEBS Journal

hnRNP K interacts with RNA binding motif protein 42 and functions in the maintenance of cellular ATP level during stress conditions

(2009) Toshiyuki Fukuda et al.   GENES TO CELLS

Protein Arginine Methylation in Mammals: Who, What, and Why

(2009) Mark T. Bedford et al.   MOLECULAR CELL

RNA granules: post-transcriptional and epigenetic modulators of gene expression

(2009) Paul Anderson et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Cytoplasmic polyadenylation and cytoplasmic polyadenylation element-dependent mRNA regulation are involved in Xenopus retinal axon development

(2009) Andrew C Lin et al.   Neural Development

Dynein motor contributes to stress granule dynamics in primary neurons

(2009) N.-P. Tsai et al.   NEUROSCIENCE

Mouse Piwi interactome identifies binding mechanism of Tdrkh Tudor domain to arginine methylated Miwi

(2009) C. Chen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Building the developmental oculome: systems biology in vertebrate eye development and disease

(2009) Salil A. Lachke et al.   Wiley Interdisciplinary Reviews-Systems Biology and Medicine

Risk Factors for Complications After Congenital Cataract Surgery without Intraocular Lens Implantation in the First 18 Months of Life

(2008) Claudia Kuhli-Hattenbach et al.   AMERICAN JOURNAL OF OPHTHALMOLOGY

Temporal requirement of the alternative-splicing factor Sfrs1 for the survival of retinal neurons

(2008) R. N. Kanadia et al.   DEVELOPMENT

A crucial role for hnRNP K in axon development in Xenopus laevis

(2008) Y. Liu et al.   DEVELOPMENT

Expression cloning inXenopusidentifies RNA‐binding proteins as regulators of embryogenesis and Rbmx as necessary for neural and muscle development

(2008) Darwin S. Dichmann et al.   DEVELOPMENTAL DYNAMICS

Musashi-1, an RNA-binding protein, is indispensable for survival of photoreceptors

(2008) Kanako Susaki et al.   EXPERIMENTAL EYE RESEARCH

Lacritin and other new proteins of the lacrimal functional unit

(2008) Robert L. McKown et al.   EXPERIMENTAL EYE RESEARCH

Persistent FoxE3 Expression Blocks Cytoskeletal Remodeling and Organelle Degradation during Lens Fiber Differentiation

(2008) H. Landgren et al.   INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE

P bodies promote stress granule assembly inSaccharomyces cerevisiae

(2008) J. Ross Buchan et al.   JOURNAL OF CELL BIOLOGY

The Drosophila FMRP and LARK RNA-Binding Proteins Function Together to Regulate Eye Development and Circadian Behavior

(2008) O. Sofola et al.   JOURNAL OF NEUROSCIENCE

MBNL1 associates with YB-1 in cytoplasmic stress granules

(2008) Hayato Onishi et al.   JOURNAL OF NEUROSCIENCE RESEARCH

Hedgehog and Dpp signaling induce cadherin Cad86C expression in the morphogenetic furrow during Drosophila eye development

(2008) Karin Schlichting et al.   MECHANISMS OF DEVELOPMENT

Immunohistochemical analysis of Musashi-1 expression during retinal regeneration of adult newt

(2008) Jun Kaneko et al.   NEUROSCIENCE LETTERS

Drosophila Muscleblind Is Involved in troponin T Alternative Splicing and Apoptosis

(2008) Marta Vicente-Crespo et al.   PLoS One

RNA-binding proteins in human genetic disease

(2008) Kiven E. Lukong et al.   TRENDS IN GENETICS

Dual localization of the RNA binding protein CUGBP-1 to stress granule and perinucleolar compartment

(2007) Ken Fujimura et al.   EXPERIMENTAL CELL RESEARCH