SorghumFDB: sorghum functional genomics database with multidimensional network analysis
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Title
SorghumFDB: sorghum functional genomics database with multidimensional network analysis
Authors
Keywords
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Journal
Database-The Journal of Biological Databases and Curation
Volume 2016, Issue -, Pages baw099
Publisher
Oxford University Press (OUP)
Online
2016-06-29
DOI
10.1093/database/baw099
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- (2014) Emma Mace et al. BMC PLANT BIOLOGY
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- (2014) J. Mullet et al. JOURNAL OF EXPERIMENTAL BOTANY
- Cellulosic ethanol fights for life
- (2014) Mark Peplow NATURE
- PLAZA 3.0: an access point for plant comparative genomics
- (2014) Sebastian Proost et al. NUCLEIC ACIDS RESEARCH
- InParanoid 8: orthology analysis between 273 proteomes, mostly eukaryotic
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- (2014) Yuko Makita et al. PLANT AND CELL PHYSIOLOGY
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- (2013) Jinpu Jin et al. NUCLEIC ACIDS RESEARCH
- PlantGSEA: a gene set enrichment analysis toolkit for plant community
- (2013) Xin Yi et al. NUCLEIC ACIDS RESEARCH
- Pfam: the protein families database
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- (2013) Lærke Münter Lassen et al. ACS Synthetic Biology
- Bioenergy grass feedstock: current options and prospects for trait improvement using emerging genetic, genomic, and systems biology toolkits
- (2012) Frank Feltus et al. Biotechnology for Biofuels
- Protein interaction data curation: the International Molecular Exchange (IMEx) consortium
- (2012) Sandra Orchard et al. NATURE METHODS
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- (2012) Cole Trapnell et al. Nature Protocols
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- (2012) Thomas Nussbaumer et al. NUCLEIC ACIDS RESEARCH
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- (2012) Tianshun Gao et al. NUCLEIC ACIDS RESEARCH
- PANTHER in 2013: modeling the evolution of gene function, and other gene attributes, in the context of phylogenetic trees
- (2012) Huaiyu Mi et al. NUCLEIC ACIDS RESEARCH
- Diversity, classification and function of the plant protein kinase superfamily
- (2012) M. D. Lehti-Shiu et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
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- (2011) R. F. Sage et al. JOURNAL OF EXPERIMENTAL BOTANY
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