MicroRNAs in Control of Plant Development

Regulation of plant root system architecture: implications for crop advancement

(2015) Eric D Rogers et al.   CURRENT OPINION IN BIOTECHNOLOGY

MicroRNA: a new target for improving plant tolerance to abiotic stress

(2015) Baohong Zhang   JOURNAL OF EXPERIMENTAL BOTANY

Primary transcripts of microRNAs encode regulatory peptides

(2015) Dominique Lauressergues et al.   NATURE

Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1) provides insights into genome evolution

(2015) Fuguang Li et al.   NATURE BIOTECHNOLOGY

Sequencing of allotetraploid cotton (Gossypium hirsutum L. acc. TM-1) provides a resource for fiber improvement

(2015) Tianzhen Zhang et al.   NATURE BIOTECHNOLOGY

microRNA evolution and expression analysis in polyploidized cotton genome

(2015) Fuliang Xie et al.   PLANT BIOTECHNOLOGY JOURNAL

Small RNA sequencing identifies miRNA roles in ovule and fibre development

(2015) Fuliang Xie et al.   PLANT BIOTECHNOLOGY JOURNAL

Role of microRNAs in plant drought tolerance

(2015) Jannatul Ferdous et al.   PLANT BIOTECHNOLOGY JOURNAL

Manipulating microRNAs for improved biomass and biofuels from plant feedstocks

(2015) Jennifer Lynn Trumbo et al.   PLANT BIOTECHNOLOGY JOURNAL

Cleavage ofINDOLE-3-ACETIC ACID INDUCIBLE28mRNA by MicroRNA847 Upregulates Auxin Signaling to Modulate Cell Proliferation and Lateral Organ Growth in Arabidopsis

(2015) Jing-Jing Wang et al.   PLANT CELL

Axillary Meristem Formation in Rice Requires theWUSCHELOrthologTILLERS ABSENT1

(2015) Wakana Tanaka et al.   PLANT CELL

The role of miR156/SPLs modules in Arabidopsis lateral root development

(2015) Niu Yu et al.   PLANT JOURNAL

The Micro-RNA172c-APETALA2-1 Node as a Key Regulator of the Common Bean-Rhizobium etliNitrogen Fixation Symbiosis

(2015) Bárbara Nova-Franco et al.   PLANT PHYSIOLOGY

Spatiotemporal Sequestration of miR165/166 by Arabidopsis Argonaute10 Promotes Shoot Apical Meristem Maintenance

(2015) Yuyi Zhou et al.   Cell Reports

miRNA regulation of nutrient homeostasis in plants

(2015) Soumitra Paul et al.   Frontiers in Plant Science

Small RNAs in plants: recent development and application for crop improvement

(2015) Ayushi Kamthan et al.   Frontiers in Plant Science

Adventitious Roots and Lateral Roots: Similarities and Differences

(2014) Catherine Bellini et al.   Annual Review of Plant Biology

The Diversity, Biogenesis, and Activities of Endogenous Silencing Small RNAs inArabidopsis

(2014) Nicolas G. Bologna et al.   Annual Review of Plant Biology

microRNA biogenesis, degradation and activity in plants

(2014) Meng Xie et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

MicroRNA-Based Biotechnology for Plant Improvement

(2014) Baohong Zhang et al.   JOURNAL OF CELLULAR PHYSIOLOGY

Regulation of flowering time by the miR156-mediated age pathway

(2014) Jia-Wei Wang   JOURNAL OF EXPERIMENTAL BOTANY

miRNAs in the crosstalk between phytohormone signalling pathways

(2014) J. Curaba et al.   JOURNAL OF EXPERIMENTAL BOTANY

Genome sequence of the cultivated cotton Gossypium arboreum

(2014) Fuguang Li et al.   NATURE GENETICS

Arabidopsis miR156 Regulates Tolerance to Recurring Environmental Stress through SPL Transcription Factors

(2014) A. Stief et al.   PLANT CELL

The bHLH Transcription Factor HBI1 Mediates the Trade-Off between Growth and Pathogen-Associated Molecular Pattern-Triggered Immunity in Arabidopsis

(2014) M. Fan et al.   PLANT CELL

ThemiR156-SPL9-DFRpathway coordinates the relationship between development and abiotic stress tolerance in plants

(2014) Long-Gang Cui et al.   PLANT JOURNAL

Small RNA and degradome profiling reveals a role for miRNAs and their targets in the developing fibers ofGossypium barbadense

(2014) Nian Liu et al.   PLANT JOURNAL

Cotton WRKY1 Mediates the Plant Defense-to-Development Transition during Infection of Cotton by Verticillium dahliae by Activating JASMONATE ZIM-DOMAIN1 Expression

(2014) C. Li et al.   PLANT PHYSIOLOGY

OsmiR396d-Regulated OsGRFs Function in Floral Organogenesis in Rice through Binding to Their Targets OsJMJ706 and OsCR4

(2014) H. Liu et al.   PLANT PHYSIOLOGY

Genome-Wide Transcriptome Profiling Revealed Cotton Fuzz Fiber Development Having a Similar Molecular Model as Arabidopsis Trichome

(2014) Qun Wan et al.   PLoS One

Polyploidy and small RNA regulation of cotton fiber development

(2014) Xueying Guan et al.   TRENDS IN PLANT SCIENCE

miR828 and miR858 regulate homoeologous MYB2 gene functions in Arabidopsis trichome and cotton fibre development

(2014) Xueying Guan et al.   Nature Communications

DWARF TILLER1, a WUSCHEL-Related Homeobox Transcription Factor, Is Required for Tiller Growth in Rice

(2014) Wenfei Wang et al.   PLoS Genetics

A Protodermal miR394 Signal Defines a Region of Stem Cell Competence in the Arabidopsis Shoot Meristem

(2013) Steffen Knauer et al.   DEVELOPMENTAL CELL

Overexpression of miR160 affects root growth and nitrogen-fixing nodule number in Medicago truncatula

(2013) Pilar Bustos-Sanmamed et al.   FUNCTIONAL PLANT BIOLOGY

MicroRNAs and Their Cross-Talks in Plant Development

(2013) Danfeng Jin et al.   Journal of Genetics and Genomics

Overexpression of microRNA OsmiR397 improves rice yield by increasing grain size and promoting panicle branching

(2013) Yu-Chan Zhang et al.   NATURE BIOTECHNOLOGY

Mobile miRNAs for stem cell maintenance

(2013) Kim Baumann   NATURE REVIEWS MOLECULAR CELL BIOLOGY

NOT2 Proteins Promote Polymerase II-Dependent Transcription and Interact with Multiple MicroRNA Biogenesis Factors in Arabidopsis

(2013) L. Wang et al.   PLANT CELL

Biogenesis, Turnover, and Mode of Action of Plant MicroRNAs

(2013) K. Rogers et al.   PLANT CELL

Overexpression of microRNA319 impacts leaf morphogenesis and leads to enhanced cold tolerance in rice (Oryza sativa L.)

(2013) CHUNHUA YANG et al.   PLANT CELL AND ENVIRONMENT

miR396 affects mycorrhization and root meristem activity in the legumeMedicago truncatula

(2013) Jérémie Bazin et al.   PLANT JOURNAL

AUXIN RESPONSE FACTOR17 Is Essential for Pollen Wall Pattern Formation in Arabidopsis

(2013) J. Yang et al.   PLANT PHYSIOLOGY

Rice WRKY13 Regulates Cross Talk between Abiotic and Biotic Stress Signaling Pathways by Selective Binding to Different cis-Elements

(2013) J. Xiao et al.   PLANT PHYSIOLOGY

Ectopic Expression of miR160 Results in Auxin Hypersensitivity, Cytokinin Hyposensitivity, and Inhibition of Symbiotic Nodule Development in Soybean

(2013) M. Turner et al.   PLANT PHYSIOLOGY

Constitutive Expression of a miR319 Gene Alters Plant Development and Enhances Salt and Drought Tolerance in Transgenic Creeping Bentgrass

(2013) M. Zhou et al.   PLANT PHYSIOLOGY

Molecular Basis of Age-Dependent Vernalization in Cardamine flexuosa

(2013) C.-M. Zhou et al.   SCIENCE

Mechanisms of Age-Dependent Response to Winter Temperature in Perennial Flowering of Arabis alpina

(2013) S. Bergonzi et al.   SCIENCE

Post-embryonic root organogenesis in cereals: branching out from model plants

(2013) Beata Orman-Ligeza et al.   TRENDS IN PLANT SCIENCE

The HSF-like Transcription Factor TBF1 Is a Major Molecular Switch for Plant Growth-to-Defense Transition

(2012) Karolina M. Pajerowska-Mukhtar et al.   CURRENT BIOLOGY

Argonautes compete for miR165/166 to regulate shoot apical meristem development

(2012) Zhonghui Zhang et al.   CURRENT OPINION IN PLANT BIOLOGY

A plant microRNA regulates the adaptation of roots to drought stress

(2012) Hao Chen et al.   FEBS LETTERS

Origins and Evolution of MicroRNA Genes in Plant Species

(2012) Masafumi Nozawa et al.   Genome Biology and Evolution

Genomewide analysis of intronic microRNAs in rice and Arabidopsis

(2012) G. D. YANG et al.   JOURNAL OF GENETICS

Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres

(2012) Andrew H. Paterson et al.   NATURE

Distinctive expression patterns and roles of the miRNA393/TIR1 homolog module in regulating flag leaf inclination and primary and crown root growth in rice (Oryza sativa)

(2012) Hongwu Bian et al.   NEW PHYTOLOGIST

Auxin ControlsArabidopsisAdventitious Root Initiation by Regulating Jasmonic Acid Homeostasis

(2012) Laurent Gutierrez et al.   PLANT CELL

Gibberellin Regulates the Arabidopsis Floral Transition through miR156-Targeted SQUAMOSA PROMOTER BINDING-LIKE Transcription Factors

(2012) S. Yu et al.   PLANT CELL

OsMYB2P-1, an R2R3 MYB Transcription Factor, Is Involved in the Regulation of Phosphate-Starvation Responses and Root Architecture in Rice

(2012) X. Dai et al.   PLANT PHYSIOLOGY

OsTIR1 and OsAFB2 Downregulation via OsmiR393 Overexpression Leads to More Tillers, Early Flowering and Less Tolerance to Salt and Drought in Rice

(2012) Kuaifei Xia et al.   PLoS One

Plant hormone jasmonate prioritizes defense over growth by interfering with gibberellin signaling cascade

(2012) D.-L. Yang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Functions of microRNAs in plant stress responses

(2012) Ramanjulu Sunkar et al.   TRENDS IN PLANT SCIENCE

Functional Specialization of the Plant miR396 Regulatory Network through Distinct MicroRNA–Target Interactions

(2012) Juan M. Debernardi et al.   PLoS Genetics

Arabidopsis Argonaute10 Specifically Sequesters miR166/165 to Regulate Shoot Apical Meristem Development

(2011) Hongliang Zhu et al.   CELL

The role of Mediator in small and long noncoding RNA production inArabidopsis thaliana

(2011) Yun Ju Kim et al.   EMBO JOURNAL

Genotypic variation for root traits of maize (Zea mays L.) from the Purhepecha Plateau under contrasting phosphorus availability

(2011) Jeannette S. Bayuelo-Jiménez et al.   FIELD CROPS RESEARCH

Reproductive competence from an annual and a perennial perspective

(2011) S. Bergonzi et al.   JOURNAL OF EXPERIMENTAL BOTANY

Auxin boost for cotton

(2011) Z Jeffrey Chen et al.   NATURE BIOTECHNOLOGY

AaTFL1Confers an Age-Dependent Response to Vernalization in PerennialArabis alpina

(2011) Renhou Wang et al.   PLANT CELL

CUP-SHAPED COTYLEDON1 transcription factor activates the expression of LSH4 and LSH3, two members of the ALOG gene family, in shoot organ boundary cells

(2011) Seiji Takeda et al.   PLANT JOURNAL

LEAF TIP NECROSIS1 Plays a Pivotal Role in the Regulation of Multiple Phosphate Starvation Responses in Rice

(2011) B. Hu et al.   PLANT PHYSIOLOGY

Genome-wide discovery and analysis of microRNAs and other small RNAs from rice embryogenic callus

(2011) Chong-Jian Chen et al.   RNA Biology

MicroRNA networks and developmental plasticity in plants

(2011) Ignacio Rubio-Somoza et al.   TRENDS IN PLANT SCIENCE

Auxin Biosynthesis and Its Role in Plant Development

(2010) Yunde Zhao   Annual Review of Plant Biology

MicroRNA-mediated signaling involved in plant root development

(2010) Yijun Meng et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

A Novel Aux/IAA28 Signaling Cascade Activates GATA23-Dependent Specification of Lateral Root Founder Cell Identity

(2010) Bert De Rybel et al.   CURRENT BIOLOGY

How cotton fibers elongate: a tale of linear cell-growth mode

(2010) Yong-Mei Qin et al.   CURRENT OPINION IN PLANT BIOLOGY

Over-expression of sly-miR156a in tomato results in multiple vegetative and reproductive trait alterations and partial phenocopy of thesftmutant

(2010) Xiaohui Zhang et al.   FEBS LETTERS

miR396-targeted AtGRF transcription factors are required for coordination of cell division and differentiation during leaf development in Arabidopsis

(2010) Li Wang et al.   JOURNAL OF EXPERIMENTAL BOTANY

Regulation of flowering time and floral patterning by miR172

(2010) Qian-Hao Zhu et al.   JOURNAL OF EXPERIMENTAL BOTANY

Systemic Signaling and Local Sensing of Phosphate in Common Bean: Cross-Talk between Photosynthate and MicroRNA399

(2010) Jun-Qi Liu et al.   Molecular Plant

Regulation of OsSPL14 by OsmiR156 defines ideal plant architecture in rice

(2010) Yongqing Jiao et al.   NATURE GENETICS

OsSPL14 promotes panicle branching and higher grain productivity in rice

(2010) Kotaro Miura et al.   NATURE GENETICS

miR156-Targeted and Nontargeted SBP-Box Transcription Factors Act in Concert to Secure Male Fertility inArabidopsis

(2010) Shuping Xing et al.   PLANT CELL

miR390,Arabidopsis TAS3tasiRNAs, and TheirAUXIN RESPONSE FACTORTargets Define an Autoregulatory Network Quantitatively Regulating Lateral Root Growth

(2010) Elena Marin et al.   PLANT CELL

Transcriptome-wide identification of microRNA targets in rice

(2010) Yong-Fang Li et al.   PLANT JOURNAL

GhMYB25-like: a key factor in early cotton fibre development

(2010) Sally-Ann Walford et al.   PLANT JOURNAL

Small RNA Duplexes Function as Mobile Silencing Signals Between Plant Cells

(2010) P. Dunoyer et al.   SCIENCE

WRKY transcription factors

(2010) Paul J. Rushton et al.   TRENDS IN PLANT SCIENCE

Small RNAs and Their Roles in Plant Development

(2009) Xuemei Chen   Annual Review of Cell and Developmental Biology

Over-expression of miR172 causes loss of spikelet determinacy and floral organ abnormalities in rice (Oryza sativa)

(2009) Qian-Hao Zhu et al.   BMC PLANT BIOLOGY

The Sequential Action of miR156 and miR172 Regulates Developmental Timing in Arabidopsis

(2009) Gang Wu et al.   CELL

Control of cell proliferation in Arabidopsis thaliana by microRNA miR396

(2009) R. E. Rodriguez et al.   DEVELOPMENT

Graft-transmissible induction of potato tuberization by the microRNA miR172

(2009) A. Martin et al.   DEVELOPMENT

Ectopic expression of miR396 suppressesGRFtarget gene expression and alters leaf growth inArabidopsis

(2009) Dongmei Liu et al.   PHYSIOLOGIA PLANTARUM

The Angiosperm Gibberellin-GID1-DELLA Growth Regulatory Mechanism: How an "Inhibitor of an Inhibitor" Enables Flexible Response to Fluctuating Environments

(2009) N. P. Harberd et al.   PLANT CELL

Phenotypic Plasticity of Adventitious Rooting in Arabidopsis Is Controlled by Complex Regulation of AUXIN RESPONSE FACTOR Transcripts and MicroRNA Abundance

(2009) L. Gutierrez et al.   PLANT CELL

Complex regulation of the TIR1/AFB family of auxin receptors

(2009) G. Parry et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genome-wide analysis reveals rapid and dynamic changes in miRNA and siRNA sequence and expression during ovule and fiber development in allotetraploid cotton (Gossypium hirsutum L.)

(2009) Mingxiong Pang et al.   GENOME BIOLOGY

Specificity of ARGONAUTE7-miR390 Interaction and Dual Functionality in TAS3 Trans-Acting siRNA Formation

(2008) Taiowa A. Montgomery et al.   CELL

Endogenous siRNA and miRNA Targets Identified by Sequencing of the Arabidopsis Degradome

(2008) Charles Addo-Quaye et al.   CURRENT BIOLOGY

Big impacts by small RNAs in plant development

(2008) George Chuck et al.   CURRENT OPINION IN PLANT BIOLOGY

Vascular signalling mediated by ZWILLE potentiates WUSCHEL function during shoot meristem stem cell development in the Arabidopsis embryo

(2008) M. R. Tucker et al.   DEVELOPMENT

Most mammalian mRNAs are conserved targets of microRNAs

(2008) R. C. Friedman et al.   GENOME RESEARCH

Global identification of microRNA–target RNA pairs by parallel analysis of RNA ends

(2008) Marcelo A German et al.   NATURE BIOTECHNOLOGY

A Protracted and Dynamic Maturation Schedule Underlies Arabidopsis Leaf Development

(2008) I. Efroni et al.   PLANT CELL

Interplay of miR164,CUP-SHAPED COTYLEDONgenes andLATERAL SUPPRESSORcontrols axillary meristem formation inArabidopsis thaliana

(2008) Smita Raman et al.   PLANT JOURNAL

The ARGONAUTE10 gene modulates shoot apical meristem maintenance and establishment of leaf polarity by repressing miR165/166 in Arabidopsis

(2008) Qili Liu et al.   PLANT JOURNAL

MicroRNA399 is a long-distance signal for the regulation of plant phosphate homeostasis

(2008) Bikram Datt Pant et al.   PLANT JOURNAL

Developmental Role and Auxin Responsiveness of Class III Homeodomain Leucine Zipper Gene Family Members in Rice

(2008) J.-I. Itoh et al.   PLANT PHYSIOLOGY

Regulatory Network of MicroRNA399 and PHO2 by Systemic Signaling

(2008) S.-I Lin et al.   PLANT PHYSIOLOGY

Dual coding of siRNAs and miRNAs by plant transposable elements

(2008) J. Piriyapongsa et al.   RNA

MicroRNA-directed regulation: to cleave or not to cleave

(2008) Allison C. Mallory et al.   TRENDS IN PLANT SCIENCE

Control of Jasmonate Biosynthesis and Senescence by miR319 Targets

(2008) Carla Schommer et al.   PLOS BIOLOGY