Toxins MazF and MqsR cleave Escherichia coli rRNA precursors at multiple sites

Substrate Recognition and Activity Regulation of theEscherichia colimRNA Endonuclease MazF

(2016) Valentina Zorzini et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Ribosome Shut-Down by 16S rRNA Fragmentation in Stationary-Phase Escherichia coli

(2016) Hannes Luidalepp et al.   JOURNAL OF MOLECULAR BIOLOGY

The toxin GraT inhibits ribosome biogenesis

(2016) Andres Ainelo et al.   MOLECULAR MICROBIOLOGY

VapCs of Mycobacterium tuberculosis cleave RNAs essential for translation

(2016) Kristoffer Winther et al.   NUCLEIC ACIDS RESEARCH

The MazF-regulon: a toolbox for the post-transcriptional stress response inEscherichia coli

(2016) Martina Sauert et al.   NUCLEIC ACIDS RESEARCH

tRNA is a new target for cleavage by a MazF toxin

(2016) Jason M. Schifano et al.   NUCLEIC ACIDS RESEARCH

Elucidation of pathways of ribosomal RNA degradation: an essential role for RNase E

(2016) Shaheen Sulthana et al.   RNA

Growth-regulating Mycobacterium tuberculosis VapC-mt4 toxin is an isoacceptor-specific tRNase

(2015) Jonathan W. Cruz et al.   Nature Communications

Synergy of Streptogramin Antibiotics Occurs Independently of Their Effects on Translation

(2014) Jonas Noeske et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

A comparison of key aspects of gene regulation inStreptomyces coelicolorandEscherichia coliusing nucleotide-resolution transcription maps produced in parallel by global and differential RNA sequencing

(2014) David A. Romero et al.   MOLECULAR MICROBIOLOGY

VapC from the Leptospiral VapBC Toxin-Antitoxin Module Displays Ribonuclease Activity on the Initiator tRNA

(2014) Alexandre P. Y. Lopes et al.   PLoS One

An RNA-seq method for defining endoribonuclease cleavage specificity identifies dual rRNA substrates for toxin MazF-mt3

(2014) Jason M. Schifano et al.   Nature Communications

Ribonucleases in bacterial toxin–antitoxin systems

(2013) Gregory M. Cook et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

When stable RNA becomes unstable: the degradation of ribosomes in bacteria and beyond

(2013) Ülo Maiväli et al.   BIOLOGICAL CHEMISTRY

Transcriptional cross-activation between toxin-antitoxin systems of Escherichia coli

(2013) Villu Kasari et al.   BMC MICROBIOLOGY

RETRACTED: (p)ppGpp Controls Bacterial Persistence by Stochastic Induction of Toxin-Antitoxin Activity

(2013) Etienne Maisonneuve et al.   CELL

Structural Basis of mRNA Recognition and Cleavage by Toxin MazF and Its Regulation by Antitoxin MazE in Bacillus subtilis

(2013) Dhirendra K. Simanshu et al.   MOLECULAR CELL

Mycobacterial toxin MazF-mt6 inhibits translation through cleavage of 23S rRNA at the ribosomal A site

(2013) J. M. Schifano et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Energetics of activation of GTP hydrolysis on the ribosome

(2013) Göran Wallin et al.   Nature Communications

VapC20 of Mycobacterium tuberculosis cleaves the Sarcin–Ricin loop of 23S rRNA

(2013) Kristoffer S. Winther et al.   Nature Communications

Functional Role of the Sarcin–Ricin Loop of the 23S rRNA in the Elongation Cycle of Protein Synthesis

(2012) Xinying Shi et al.   JOURNAL OF MOLECULAR BIOLOGY

Mechanism of RNA 2′,3′-cyclic phosphate end healing by T4 polynucleotide kinase–phosphatase

(2012) Ushati Das et al.   NUCLEIC ACIDS RESEARCH

Toxin-Antitoxin Systems in Bacteria and Archaea

(2011) Yoshihiro Yamaguchi et al.   Annual Review of Genetics

Selective Translation of Leaderless mRNAs by Specialized Ribosomes Generated by MazF in Escherichia coli

(2011) Oliver Vesper et al.   CELL

Persistence: mechanisms for triggering and enhancing phenotypic variability

(2011) NQ Balaban   CURRENT OPINION IN GENETICS & DEVELOPMENT

Ribosome degradation in growing bacteria

(2011) Kerli Piir et al.   EMBO REPORTS

Antibiotic-induced ribosomal assembly defects result from changes in the synthesis of ribosomal proteins

(2011) Triinu Siibak et al.   MOLECULAR MICROBIOLOGY

Enteric virulence associated protein VapC inhibits translation by cleavage of initiator tRNA

(2011) K. S. Winther et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Bacterial persistence by RNA endonucleases

(2011) Etienne Maisonneuve et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Intragenomic heterogeneity of the 16S rRNA gene in strain UFO1 caused by a 100-bp insertion in helix 6

(2010) Allison E. Ray et al.   FEMS MICROBIOLOGY ECOLOGY

The primary transcriptome of the major human pathogen Helicobacter pylori

(2010) Cynthia M. Sharma et al.   NATURE

Regulation of phenotypic variability by a threshold-based mechanism underlies bacterial persistence

(2010) Eitan Rotem et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Degradation of ribosomal RNA during starvation: Comparison to quality control during steady-state growth and a role for RNase PH

(2010) G. N. Basturea et al.   RNA

The Mechanism for Activation of GTP Hydrolysis on the Ribosome

(2010) R. M. Voorhees et al.   SCIENCE

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

MqsR, a Crucial Regulator for Quorum Sensing and Biofilm Formation, Is a GCU-specific mRNA Interferase inEscherichia coli

(2009) Yoshihiro Yamaguchi et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Three new RelE-homologous mRNA interferases ofEscherichia colidifferentially induced by environmental stresses

(2009) Mikkel Christensen-Dalsgaard et al.   MOLECULAR MICROBIOLOGY

Escherichia coli MazF Leads to the Simultaneous Selective Synthesis of Both “Death Proteins” and “Survival Proteins”

(2009) Shahar Amitai et al.   PLoS Genetics

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

Erythromycin- and Chloramphenicol-Induced Ribosomal Assembly Defects Are Secondary Effects of Protein Synthesis Inhibition

(2008) T. Siibak et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Colicin E3 cleavage of 16S rRNA impairs decoding and accelerates tRNA translocation onEscherichia coliribosomes

(2008) Lorna E. Lancaster et al.   MOLECULAR MICROBIOLOGY