The MazF-regulon: a toolbox for the post-transcriptional stress response inEscherichia coli

Escherichia coli Quorum-Sensing EDF, A Peptide Generated by Novel Multiple Distinct Mechanisms and Regulated by trans -Translation

(2016) Sathish Kumar et al.   mBio

HTSeq--a Python framework to work with high-throughput sequencing data

(2014) S. Anders et al.   BIOINFORMATICS

A new system for naming ribosomal proteins

(2014) Nenad Ban et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

A multi-split mapping algorithm for circular RNA, splicing, trans-splicing and fusion detection

(2014) Steve Hoffmann et al.   GENOME BIOLOGY

The significance of translation regulation in the stress response

(2013) Flora Picard et al.   BMC GENOMICS

Terminator still moving forward: expanding roles for Rho factor

(2013) Marc Boudvillain et al.   CURRENT OPINION IN MICROBIOLOGY

MazF-induced Growth Inhibition and Persister Generation inEscherichia coli

(2013) Arti Tripathi et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

EcoGene 3.0

(2012) Jindan Zhou et al.   NUCLEIC ACIDS RESEARCH

Ribosomal protein S1 unwinds double-stranded RNA in multiple steps

(2012) X. Qu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Selective translation during stress in Escherichia coli

(2012) Isabella Moll et al.   TRENDS IN BIOCHEMICAL SCIENCES

Toxin-Antitoxin Systems Influence Biofilm and Persister Cell Formation and the General Stress Response

(2011) Xiaoxue Wang et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Selective Translation of Leaderless mRNAs by Specialized Ribosomes Generated by MazF in Escherichia coli

(2011) Oliver Vesper et al.   CELL

Bacterial Transcription Terminators: The RNA 3′-End Chronicles

(2011) Jason M. Peters et al.   JOURNAL OF MOLECULAR BIOLOGY

The Escherichia coli Extracellular Death Factor EDF Induces the Endoribonucleolytic Activities of the Toxins MazF and ChpBK

(2011) Maria Belitsky et al.   MOLECULAR CELL

Regulation of growth and death in Escherichia coli by toxin–antitoxin systems

(2011) Yoshihiro Yamaguchi et al.   NATURE REVIEWS MICROBIOLOGY

Persister Cells

(2010) Kim Lewis   Annual Review of Microbiology

The Ribosomal Protein L2 Interacts with the RNA Polymerase   Subunit and Acts as a Transcription Modulator in Escherichia coli

(2010) V. Rippa et al.   JOURNAL OF BACTERIOLOGY

A NusE:NusG Complex Links Transcription and Translation

(2010) B. M. Burmann et al.   SCIENCE

Cooperation Between Translating Ribosomes and RNA Polymerase in Transcription Elongation

(2010) S. Proshkin et al.   SCIENCE

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

Correlation of mRNA and protein in complex biological samples

(2009) Tobias Maier et al.   FEBS LETTERS

Genome-Wide Analysis in Vivo of Translation with Nucleotide Resolution Using Ribosome Profiling

(2009) N. T. Ingolia et al.   SCIENCE

Fast Mapping of Short Sequences with Mismatches, Insertions and Deletions Using Index Structures

(2009) Steve Hoffmann et al.   PLoS Computational Biology

Comprehensive Functional Analysis of Mycobacterium tuberculosis Toxin-Antitoxin Systems: Implications for Pathogenesis, Stress Responses, and Evolution

(2009) Holly R. Ramage et al.   PLoS Genetics

Escherichia coli MazF Leads to the Simultaneous Selective Synthesis of Both “Death Proteins” and “Survival Proteins”

(2009) Shahar Amitai et al.   PLoS Genetics

(p)ppGpp: Still Magical?

(2008) Katarzyna Potrykus et al.   Annual Review of Microbiology

The Extracellular Death Factor: Physiological and Genetic Factors Influencing Its Production and Response in Escherichia coli

(2008) I. Kolodkin-Gal et al.   JOURNAL OF BACTERIOLOGY