Accelerated cloning of a potato late blight–resistance gene using RenSeq and SMRT sequencing

Rapid cloning of disease-resistance genes in plants using mutagenesis and sequence capture

(2016) Burkhard Steuernagel et al.   NATURE BIOTECHNOLOGY

NLR-parser: rapid annotation of plant NLR complements

(2015) Burkhard Steuernagel et al.   BIOINFORMATICS

PacBio-LITS: a large-insert targeted sequencing method for characterization of human disease-associated chromosomal structural variations

(2015) Min Wang et al.   BMC GENOMICS

A Plant Immune Receptor Detects Pathogen Effectors that Target WRKY Transcription Factors

(2015) Panagiotis F. Sarris et al.   CELL

EXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics

(2014) Ghanasyam Rallapalli et al.   BMC GENOMICS

Defining the full tomato NB-LRR resistance gene repertoire using genomic and cDNA RenSeq

(2014) Giuseppe Andolfo et al.   BMC PLANT BIOLOGY

Salicylic acid is an indispensable component of the Ny-1 resistance-gene-mediated response against Potato virus Y infection in potato

(2014) Š. Baebler et al.   JOURNAL OF EXPERIMENTAL BOTANY

CDD: NCBI's conserved domain database

(2014) Aron Marchler-Bauer et al.   NUCLEIC ACIDS RESEARCH

Elevating crop disease resistance with cloned genes

(2014) J. D. G. Jones et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

A novel conserved mechanism for plant NLR protein pairs: the “integrated decoy” hypothesis

(2014) Stella Cesari et al.   Frontiers in Plant Science

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Solanumresistance genes againstPhytophthora infestansand their corresponding avirulence genes

(2013) Jan Rodewald et al.   MOLECULAR PLANT PATHOLOGY

A single-molecule long-read survey of the human transcriptome

(2013) Donald Sharon et al.   NATURE BIOTECHNOLOGY

Resistance gene enrichment sequencing (RenSeq) enables reannotation of the NB-LRR gene family from sequenced plant genomes and rapid mapping of resistance loci in segregating populations

(2013) Florian Jupe et al.   PLANT JOURNAL

Pivoting the Plant Immune System from Dissection to Deployment

(2013) J. L. Dangl et al.   SCIENCE

Identification and localisation of the NB-LRR gene family within the potato genome

(2012) Florian Jupe et al.   BMC GENOMICS

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

(2012) Anton Bankevich et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Big data in small places

(2012) Daniel MacLean et al.   NATURE BIOTECHNOLOGY

Host Protein BSL1 Associates with Phytophthora infestans RXLR Effector AVR2 and the Solanum demissum Immune Receptor R2 to Mediate Disease Resistance

(2012) D. G. O. Saunders et al.   PLANT CELL

Genome sequence and analysis of the tuber crop potato

(2011) Xun Xu et al.   NATURE

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Inheritance of resistance in Solanum nigrum to Phytophthora infestans

(2009) R. Lebecka   EUROPEAN JOURNAL OF PLANT PATHOLOGY

Rpi-vnt1.1, aTm-22Homolog fromSolanum venturii, Confers Resistance to Potato Late Blight

(2009) Simon J. Foster et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

MEME SUITE: tools for motif discovery and searching

(2009) T. L. Bailey et al.   NUCLEIC ACIDS RESEARCH

RRS1andRPS4provide a dualResistance-gene system against fungal and bacterial pathogens

(2009) Mari Narusaka et al.   PLANT JOURNAL

Real-Time DNA Sequencing from Single Polymerase Molecules

(2008) J. Eid et al.   SCIENCE

Societal Costs of Late Blight in Potato and Prospects of Durable Resistance Through Cisgenic Modification

(2008) A. J. Haverkort et al.   POTATO RESEARCH