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Title
Evolving understanding of rumen methanogen ecophysiology
Authors
Keywords
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Journal
Frontiers in Microbiology
Volume 14, Issue -, Pages -
Publisher
Frontiers Media SA
Online
2023-11-07
DOI
10.3389/fmicb.2023.1296008
References
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Note: Only part of the references are listed.- Methyl-Based Methanogenesis: an Ecological and Genomic Review
- (2023) Clifton P. Bueno de Mesquita et al. MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS
- The dual role of a multi‐heme cytochrome in methanogenesis: MmcA is important for energy conservation and carbon metabolism in Methanosarcina acetivorans
- (2023) Blake E. Downing et al. MOLECULAR MICROBIOLOGY
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- (2023) Alex J. La Reau et al. Scientific Reports
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- (2023) Xiongxiong Cui et al. Microbiology Spectrum
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- (2023) N. Stepanchenko et al. JOURNAL OF DAIRY SCIENCE
- Considerations and best practices in animal science 16S ribosomal RNA gene sequencing microbiome studies
- (2022) Margaret D Weinroth et al. JOURNAL OF ANIMAL SCIENCE
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- (2022) Youqiang Xu et al. Frontiers in Microbiology
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- (2022) Samat Amat et al. Frontiers in Microbiology
- Full adoption of the most effective strategies to mitigate methane emissions by ruminants can help meet the 1.5 °C target by 2030 but not 2050
- (2022) Claudia Arndt et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Electron flow: key to mitigating ruminant methanogenesis
- (2022) Sinead C. Leahy et al. TRENDS IN MICROBIOLOGY
- Methane emissions and rumen metabolite concentrations in cattle fed two different silages
- (2022) R. Bica et al. Scientific Reports
- Bovine host genome acts on rumen microbiome function linked to methane emissions
- (2022) Marina Martínez-Álvaro et al. Communications Biology
- Diversity and Evolution of Methane-Related Pathways in Archaea
- (2022) Pierre Simon Garcia et al. Annual Review of Microbiology
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- (2022) Mindia A. S. Haryono et al. Frontiers in Microbiology
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- Stable isotopes provide evidence that condensed tannins from sericea lespedeza are degraded by ruminal microbes
- (2022) Flavia O. S. van Cleef et al. Scientific Reports
- The effect of 3-nitrooxypropanol, a potent methane inhibitor, on ruminal microbial gene expression profiles in dairy cows
- (2022) Dipti W. Pitta et al. Microbiome
- The IMG/M data management and analysis system v.7: content updates and new features
- (2022) I-Min A Chen et al. NUCLEIC ACIDS RESEARCH
- Full-length 16S rRNA gene amplicon analysis of human gut microbiota using MinION™ nanopore sequencing confers species-level resolution
- (2021) Yoshiyuki Matsuo et al. BMC MICROBIOLOGY
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- (2021) Laura Glendinning et al. Scientific Reports
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- (2021) S. J. Meale et al. Scientific Reports
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- (2021) Jacobo de la Cuesta-Zuluaga et al. mSystems
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- (2021) Jinjie Zhou et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
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- (2021) M. Henchion et al. Animal
- Methanogenic archaea use a bacteria-like methyltransferase system to demethoxylate aromatic compounds
- (2021) Julia M. Kurth et al. ISME Journal
- Methane emissions and δ13C composition from beef steers consuming increasing proportions of sericea lespedeza hay on bermudagrass hay diets
- (2021) Flavia O S van Cleef et al. JOURNAL OF ANIMAL SCIENCE
- Temporal changes in total and metabolically active ruminal methanogens in dairy cows supplemented with 3-nitrooxypropanol
- (2021) D.W. Pitta et al. JOURNAL OF DAIRY SCIENCE
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- (2010) Peter H. Janssen ANIMAL FEED SCIENCE AND TECHNOLOGY
- Hydrogenases from Methanogenic Archaea, Nickel, a Novel Cofactor, and H2Storage
- (2010) Rudolf K. Thauer et al. Annual Review of Biochemistry
- The Human Gut Microbiome: Ecology and Recent Evolutionary Changes
- (2010) Jens Walter et al. Annual Review of Microbiology
- The Newick utilities: high-throughput phylogenetic tree processing in the UNIX shell
- (2010) T. Junier et al. BIOINFORMATICS
- BMGE (Block Mapping and Gathering with Entropy): a new software for selection of phylogenetic informative regions from multiple sequence alignments
- (2010) Alexis Criscuolo et al. BMC EVOLUTIONARY BIOLOGY
- Invited review: Ruminant ecology and evolution: Perspectives useful to ruminant livestock research and production
- (2010) T.J. Hackmann et al. JOURNAL OF DAIRY SCIENCE
- The Genome Sequence of the Rumen Methanogen Methanobrevibacter ruminantium Reveals New Possibilities for Controlling Ruminant Methane Emissions
- (2010) Sinead C. Leahy et al. PLoS One
- The Glycobiome of the Rumen Bacterium Butyrivibrio proteoclasticus B316T Highlights Adaptation to a Polysaccharide-Rich Environment
- (2010) William J. Kelly et al. PLoS One
- Protein complexing in a methanogen suggests electron bifurcation and electron delivery from formate to heterodisulfide reductase
- (2010) K. C. Costa et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Assessment of the Microbial Ecology of Ruminal Methanogens in Cattle with Different Feed Efficiencies
- (2009) M. Zhou et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Effects of sampling location and time, and host animal on assessment of bacterial diversity and fermentation parameters in the bovine rumen
- (2009) M. Li et al. JOURNAL OF APPLIED MICROBIOLOGY
- The Iron-Hydrogenase of Thermotoga maritima Utilizes Ferredoxin and NADH Synergistically: a New Perspective on Anaerobic Hydrogen Production
- (2009) G. J. Schut et al. JOURNAL OF BACTERIOLOGY
- Methanogenesis byMethanosarcina acetivoransinvolves two structurally and functionally distinct classes of heterodisulfide reductase
- (2009) Nicole R. Buan et al. MOLECULAR MICROBIOLOGY
- Electron transfer in syntrophic communities of anaerobic bacteria and archaea
- (2009) Alfons J. M. Stams et al. NATURE REVIEWS MICROBIOLOGY
- Genomic Characterization of Methanomicrobiales Reveals Three Classes of Methanogens
- (2009) Iain Anderson et al. PLoS One
- Plant Cell Wall Breakdown by Anaerobic Microorganisms from the Mammalian Digestive Tract
- (2008) Harry J. Flint et al. Annals of the New York Academy of Sciences
- Metabolic, Phylogenetic, and Ecological Diversity of the Methanogenic Archaea
- (2008) Yuchen Liu et al. Annals of the New York Academy of Sciences
- Structure of the Archaeal Community of the Rumen
- (2008) P. H. Janssen et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Changes in methane emission and rumen fermentation parameters induced by refaunation in sheep
- (2008) D. P. Morgavi et al. Australian journal of experimental agriculture
- Physiological basis for residual feed intake1
- (2008) R. M. Herd et al. JOURNAL OF ANIMAL SCIENCE
- Methanogenic archaea: ecologically relevant differences in energy conservation
- (2008) Rudolf K. Thauer et al. NATURE REVIEWS MICROBIOLOGY
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