Shift of Feeding Strategies from Grazing to Different Forage Feeds Reshapes the Rumen Microbiota To Improve the Ability of Tibetan Sheep (Ovis aries) To Adapt to the Cold Season

Different feeding strategies can affect growth performance and rumen functions in Gangba sheep as revealed by integrated transcriptome and microbiome analyses

(2022) Zhang Jize et al.   Frontiers in Microbiology

Seasonal dynamics of diet–gut microbiota interaction in adaptation of yaks to life at high altitude

(2021) Na Guo et al.   npj Biofilms and Microbiomes

Recent progress in research on the gut microbiota and highland adaptation on the Qinghai‐Tibet Plateau

(2021) Kui Liu et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Selenium Yeast Dietary Supplement Affects Rumen Bacterial Population Dynamics and Fermentation Parameters of Tibetan Sheep (Ovis aries) in Alpine Meadow

(2021) Xiongxiong Cui et al.   Frontiers in Microbiology

Rumen Microbiota of Tibetan Sheep (Ovis aries) Adaptation to Extremely Cold Season on the Qinghai-Tibetan Plateau

(2021) Qingshan Fan et al.   Frontiers in Veterinary Science

Diversity and Composition of Rumen Bacteria, Fungi, and Protozoa in Goats and Sheep Living in the Same High-Altitude Pasture

(2020) Suo Langda et al.   Animals

Metagenomic Insights into Effects of Thiamine Supplementation on Carbohydrate-Active Enzymes’ Profile in Dairy Cows Fed High-Concentrate Diets

(2020) Yiguang Zhao et al.   Animals

An alternative pentose phosphate pathway in human gut bacteria for the degradation of C5 sugars in dietary fibers

(2020) Laura S. Garschagen et al.   FEBS Journal

Effect of different glucogenic to lipogenic nutrient ratios on rumen fermentation and bacterial community in vitro

(2020) Dengke Hua et al.   JOURNAL OF APPLIED MICROBIOLOGY

Advances in Microbiome Research for Animal Health

(2020) Raquel S. Peixoto et al.   Annual Review of Animal Biosciences

Effects of the captive and wild environment on diversity of the gut microbiome of deer mice (Peromyscus maniculatus)

(2019) Elliott Schmidt et al.   ISME Journal

Seasonal differences in rumen bacterial flora of wild Hokkaido sika deer and partial characterization of an unknown bacterial group possibly involved in fiber digestion in winter

(2019) Hidehisa Yamano et al.   ANIMAL SCIENCE JOURNAL

Living the high life: Could gut microbiota matter for adaptation to high altitude?

(2019) Florent Mazel   MOLECULAR ECOLOGY

Potential role of rumen microbiota in altering average daily gain and feed efficiency in meat goats fed simple and mixed pastures using bacterial tag-encoded FLX amplicon pyrosequencing1

(2019) Byeng Ryel Min et al.   JOURNAL OF ANIMAL SCIENCE

Rumen bacterial diversity of Tibetan sheep (Ovis aries) associated with different forage types on the Qinghai-Tibetan Plateau

(2019) Xiongxiong Cui et al.   CANADIAN JOURNAL OF MICROBIOLOGY

The human gut bacteria Christensenellaceae are widespread, heritable, and associated with health

(2019) Jillian L. Waters et al.   BMC BIOLOGY

Effect of different levels of selenium yeast on the antioxidant status, nutrient digestibility, selenium balances and nitrogen metabolism of Tibetan sheep in the Qinghai-Tibetan Plateau

(2019) Zhaofeng Wang et al.   SMALL RUMINANT RESEARCH

Tibetan sheep have a high capacity to absorb and to regulate metabolism of SCFA in the rumen epithelium to adapt to low energy intake

(2019) Xiaoping Jing et al.   BRITISH JOURNAL OF NUTRITION

Oat hay as winter feed improves digestibility, nitrogen balance and energy utilization of Tibetan sheep (Ovis aries) in the Qinghai Tibetan Plateau

(2019) Nadir Abdelraheem et al.   Livestock Science

Effect of level of oat hay intake on apparent digestibility, rumen fermentation and urinary purine derivatives in Tibetan and fine-wool sheep

(2018) J.W. Zhou et al.   ANIMAL FEED SCIENCE AND TECHNOLOGY

Associations between the gut microbiota and host responses to high altitude

(2018) J. Philip Karl et al.   AMERICAN JOURNAL OF PHYSIOLOGY-GASTROINTESTINAL AND LIVER PHYSIOLOGY

Rumen prokaryotic communities of ruminants under different feeding paradigms on the Qinghai-Tibetan Plateau

(2017) Dan Xue et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Monensin and Nisin Affect Rumen Fermentation and Microbiota Differently In Vitro

(2017) Junshi Shen et al.   Frontiers in Microbiology

Microbiome and metabolic disease: revisiting the bacterial phylum Bacteroidetes

(2016) Elizabeth L. Johnson et al.   JOURNAL OF MOLECULAR MEDICINE-JMM

Shifts in Rumen Fermentation and Microbiota Are Associated with Dissolved Ruminal Hydrogen Concentrations in Lactating Dairy Cows Fed Different Types of Carbohydrates

(2016) Min Wang et al.   JOURNAL OF NUTRITION

Changes in the rumen microbiome and metabolites reveal the effect of host genetics on hybrid crosses

(2016) Zhipeng Li et al.   Environmental Microbiology Reports

Social behavior shapes the chimpanzee pan-microbiome

(2016) A. H. Moeller et al.   Science Advances

Ruminal Bacterial Community Composition in Dairy Cows Is Dynamic over the Course of Two Lactations and Correlates with Feed Efficiency

(2015) Kelsea A. Jewell et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

RUMINANT NUTRITION SYMPOSIUM: How to use data on the rumen microbiome to improve our understanding of ruminant nutrition1,2

(2015) J. L. Firkins et al.   JOURNAL OF ANIMAL SCIENCE

In-depth diversity analysis of the bacterial community resident in the camel rumen

(2015) Javad Gharechahi et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Metatranscriptomic Analyses of Plant Cell Wall Polysaccharide Degradation by Microorganisms in the Cow Rumen

(2014) Xin Dai et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Characterization of the rumen microbiome of Indian Kankrej cattle (Bos indicus) adapted to different forage diet

(2014) Vilas Patel et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Exercise and associated dietary extremes impact on gut microbial diversity

(2014) Siobhan F Clarke et al.   GUT

Effect of dietary physically effective fiber on ruminal fermentation and the fatty acid profile of milk in dairy goats

(2014) Fei Li et al.   JOURNAL OF DAIRY SCIENCE

Relationship between the Rumen Microbiome and Residual Feed Intake-Efficiency of Brahman Bulls Stocked on Bermudagrass Pastures

(2014) Joshua C. McCann et al.   PLoS One

Two Different Bacterial Community Types Are Linked with the Low-Methane Emission Trait in Sheep

(2014) Sandra Kittelmann et al.   PLoS One

Drives and limits to feed intake in ruminants

(2014) Michael S. Allen   Animal Production Science

Hypoxia Adaptations in the Grey Wolf (Canis lupus chanco) from Qinghai-Tibet Plateau

(2014) Wenping Zhang et al.   PLoS Genetics

The use of direct-fed microbials for mitigation of ruminant methane emissions: a review

(2013) J. Jeyanathan et al.   Animal

Exploring the bovine rumen bacterial community from birth to adulthood

(2013) Elie Jami et al.   ISME Journal

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

Ruminococcus bromii is a keystone species for the degradation of resistant starch in the human colon

(2012) Xiaolei Ze et al.   ISME Journal

Rumen microbial variation and nutrient utilisation in mithun (Bos frontalis) under different feeding regimes

(2012) B. Prakash et al.   JOURNAL OF ANIMAL PHYSIOLOGY AND ANIMAL NUTRITION

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Perturbation Dynamics of the Rumen Microbiota in Response to Exogenous Butyrate

(2012) Robert W. Li et al.   PLoS One

Host-Gut Microbiota Metabolic Interactions

(2012) J. K. Nicholson et al.   SCIENCE

Evaluation of DNA extraction methods of rumen microbial populations

(2012) Gabriela Villegas-Rivera et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons

(2011) B. J. Haas et al.   GENOME RESEARCH

Saccharofermentans acetigenes gen. nov., sp. nov., an anaerobic bacterium isolated from sludge treating brewery wastewater

(2010) S. Chen et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Comparative Genome Analysis of Prevotella ruminicola and Prevotella bryantii: Insights into Their Environmental Niche

(2010) Janaki Purushe et al.   MICROBIAL ECOLOGY

Rumen Bacterial Diversity Dynamics Associated with Changing from Bermudagrass Hay to Grazed Winter Wheat Diets

(2009) Dipti W. Pitta et al.   MICROBIAL ECOLOGY

Characterizing a model human gut microbiota composed of members of its two dominant bacterial phyla

(2009) M. A. Mahowald et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA