An overview of plasmid transfer in the plant microbiome

Comparison of the Rhizobacteria Serratia sp. H6 and Enterobacter sp. L7 on Arabidopsis thaliana Growth Promotion

(2023) Narmy Sareli González-Ista et al.   CURRENT MICROBIOLOGY

Stress-buster Enterobacter sp. alleviates salinity stress in Cajanus cajan together with impacting its rhizospheric microbiome

(2023) Gautam Anand et al.   SOUTH AFRICAN JOURNAL OF BOTANY

Root exudate-derived compounds stimulate the phosphorus solubilizing ability of bacteria

(2023) Hugo A. Pantigoso et al.   Scientific Reports

Plasmids manipulate bacterial behaviour through translational regulatory crosstalk

(2023) Catriona M. A. Thompson et al.   PLOS BIOLOGY

Conceptualizing microbe–plasmid communities as complex adaptive systems

(2023) Shai Pilosof   TRENDS IN MICROBIOLOGY

Role of Plasmid in Pesticide Degradation and Metal Tolerance in Two Plant Growth-Promoting Rhizobacteria Bacillus cereus (NCIM 5557) and Bacillus safensis (NCIM 5558)

(2022) Tina Roy et al.   CURRENT MICROBIOLOGY

Endophytic bacterial community of Stellera chamaejasme L. and its role in improving host plants' competitiveness in grasslands

(2022) Yuejuan Jiang et al.   ENVIRONMENTAL MICROBIOLOGY

IncHI1A plasmids potentially facilitate horizontal flow of antibiotic resistance genes to pathogens in microbial communities of urban residential sewage

(2022) Asmus K. Olesen et al.   MOLECULAR ECOLOGY

Horizontal Gene Transfer of an IncP1 Plasmid to Soil Bacterial Community Introduced by Escherichia coli through Manure Amendment in Soil Microcosms

(2022) Gonçalo Macedo et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

RcgA and RcgR, Two Novel Proteins Involved in the Conjugative Transfer of Rhizobial Plasmids

(2022) Lucas G. Castellani et al.   mBio

Acinetobacter baylyi Strain BD413 Can Acquire an Antibiotic Resistance Gene by Natural Transformation on Lettuce Phylloplane and Enter the Endosphere

(2022) Valentina Riva et al.   Antibiotics-Basel

Plant-associated Bacillus mobilizes its secondary metabolites upon perception of the siderophore pyochelin produced by a Pseudomonas competitor

(2022) Sofija Andrić et al.   ISME Journal

Comparative proteomic analysis of saline tolerant, phosphate solubilizing endophytic Pantoea sp., and Pseudomonas sp. isolated from Eichhornia rhizosphere

(2022) P. Priya et al.   MICROBIOLOGICAL RESEARCH

The proficiency of the original host species determines community-level plasmid dynamics

(2021) Anastasia Kottara et al.   FEMS MICROBIOLOGY ECOLOGY

Designing a home for beneficial plant microbiomes

(2021) Chunxu Song et al.   CURRENT OPINION IN PLANT BIOLOGY

Antibiotic Resistance Gene-Carrying Plasmid Spreads into the Plant Endophytic Bacteria using Soil Bacteria as Carriers

(2021) Han Xu et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Simultaneous removal of phosphorous and nitrogen by ammonium assimilation and aerobic denitrification of novel phosphate-accumulating organism Pseudomonas chloritidismutans K14

(2021) Pengfei Hou et al.   BIORESOURCE TECHNOLOGY

Bacillus velezensis stimulates resident rhizosphere Pseudomonas stutzeri for plant health through metabolic interactions

(2021) Xinli Sun et al.   ISME Journal

Multiple pre-harvest applications of antagonist Pseudomonas fluorescens ZX induce resistance against blue and green molds in postharvest citrus fruit

(2021) Zhirong Wang et al.   LWT-FOOD SCIENCE AND TECHNOLOGY

Horizontal Gene Transfer of Antibiotic Resistance from Acinetobacter baylyi to Escherichia coli on Lettuce and Subsequent Antibiotic Resistance Transmission to the Gut Microbiome

(2020) Marlène Maeusli et al.   mSphere

Plant–microbiome interactions: from community assembly to plant health

(2020) Pankaj Trivedi et al.   NATURE REVIEWS MICROBIOLOGY

Transfer of the Symbiotic Plasmid of Rhizobium etli CFN42 to Endophytic Bacteria Inside Nodules

(2020) Luis Alfredo Bañuelos-Vazquez et al.   Frontiers in Microbiology

Niche Differentiation in the Composition, Predicted Function, and Co-occurrence Networks in Bacterial Communities Associated With Antarctic Vascular Plants

(2020) Qian Zhang et al.   Frontiers in Microbiology

A Novel Small RNA on the Pseudomonas putida KT2440 Chromosome Is Involved in the Fitness Cost Imposed by IncP-1 Plasmid RP4

(2020) Hibiki Kawano et al.   Frontiers in Microbiology

Potential Plant Growth-Promoting Bacteria with Heavy Metal Resistance

(2020) Derya Efe   CURRENT MICROBIOLOGY

Patterns of antimicrobial resistance observed in the Middle East: Environmental and health care retrospectives

(2020) Zahraa Alaali et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Dominance Between Plasmids Determines the Extent of Biofilm Formation

(2020) João Alves Gama et al.   Frontiers in Microbiology

Plant Species-Dependent Increased Abundance and Diversity of IncP-1 Plasmids in the Rhizosphere: New Insights Into Their Role and Ecology

(2020) Masaki Shintani et al.   Frontiers in Microbiology

Mobile Compensatory Mutations Promote Plasmid Survival

(2019) Martin Zwanzig et al.   mSystems

Ecology and Evolution of Plant Microbiomes

(2019) Viviane Cordovez et al.   Annual Review of Microbiology

Pathogen-induced activation of disease-suppressive functions in the endophytic root microbiome

(2019) Víctor J. Carrión et al.   SCIENCE

A halotolerant Enterobacter sp. displaying ACC deaminase activity promotes rice seedling growth under salt stress

(2018) Anumita Sarkar et al.   RESEARCH IN MICROBIOLOGY

Application of biosolids drives the diversity of antibiotic resistance genes in soil and lettuce at harvest

(2018) Lu Yang et al.   SOIL BIOLOGY & BIOCHEMISTRY

Genetic and Molecular Mechanisms Underlying Symbiotic Specificity in Legume-Rhizobium Interactions

(2018) Qi Wang et al.   Frontiers in Plant Science

Microbial interactions within the plant holobiont

(2018) M. Amine Hassani et al.   Microbiome

Monitoring plasmid-mediated horizontal gene transfer in microbiomes: recent advances and future perspectives

(2018) Rafael Pinilla-Redondo et al.   PLASMID

Application of Struvite Alters the Antibiotic Resistome in Soil, Rhizosphere, and Phyllosphere

(2017) Qing-Lin Chen et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

The complete genome sequence of Bacillus velezensis strain GH1-13 reveals agriculturally beneficial properties and a unique plasmid

(2017) Sang Yoon Kim et al.   JOURNAL OF BIOTECHNOLOGY

Conjugation efficiency depends on intra and intercellular interactions between distinct plasmids: Plasmids promote the immigration of other plasmids but repress co-colonizing plasmids

(2017) João Alves Gama et al.   PLASMID

Key Impact of an Uncommon Plasmid on Bacillus amyloliquefaciens subsp. plantarum S499 Developmental Traits and Lipopeptide Production

(2017) Giulia Molinatto et al.   Frontiers in Microbiology

Bacillus: A Biological Tool for Crop Improvement through Bio-Molecular Changes in Adverse Environments

(2017) Ramalingam Radhakrishnan et al.   Frontiers in Physiology

Positive selection inhibits gene mobilization and transfer in soil bacterial communities

(2017) James P. J. Hall et al.   Nature Ecology & Evolution

Editorial special issue: soil, plants and endophytes

(2016) Stéphane Compant et al.   PLANT AND SOIL

Plasmid transfer in biofilms: a perspective on limitations and opportunities

(2016) Thibault Stalder et al.   npj Biofilms and Microbiomes

Genomic and Genetic Diversity within the Pseudomonas fluorescens Complex

(2016) Daniel Garrido-Sanz et al.   PLoS One

Occurrence of antibiotic resistance genes in culturable bacteria isolated from Turkish trout farms and their local aquatic environment

(2015) E Capkin et al.   DISEASES OF AQUATIC ORGANISMS

Environmentally co-occurring mercury resistance plasmids are genetically and phenotypically diverse and confer variable context-dependent fitness effects

(2015) James P.J. Hall et al.   ENVIRONMENTAL MICROBIOLOGY

A widespread plant-fungal-bacterial symbiosis promotes plant biodiversity, plant nutrition and seedling recruitment

(2015) Marcel GA van der Heijden et al.   ISME Journal

Strategies and approaches in plasmidome studies—uncovering plasmid diversity disregarding of linear elements?

(2015) Julián R. Dib et al.   Frontiers in Microbiology

Genomics of microbial plasmids: classification and identification based on replication and transfer systems and host taxonomy

(2015) Masaki Shintani et al.   Frontiers in Microbiology

Impact of Fertilizing with Raw or Anaerobically Digested Sewage Sludge on the Abundance of Antibiotic-Resistant Coliforms, Antibiotic Resistance Genes, and Pathogenic Bacteria in Soil and on Vegetables at Harvest

(2014) Teddie O. Rahube et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Hundreds of Circular Novel Plasmids and DNA Elements Identified in a Rat Cecum Metamobilome

(2014) Tue Sparholt Jørgensen et al.   PLoS One

A method for purifying high quality and high yield plasmid DNA for metagenomic and deep sequencing approaches

(2013) Aya Brown Kav et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Going back to the roots: the microbial ecology of the rhizosphere

(2013) Laurent Philippot et al.   NATURE REVIEWS MICROBIOLOGY

Invasion of E. coli biofilms by antibiotic resistance plasmids

(2013) Jaroslaw E. Król et al.   PLASMID

Antimicrobial Resistance in the Food Chain: A Review

(2013) Claire Verraes et al.   International Journal of Environmental Research and Public Health

Microbial life in the phyllosphere

(2012) Julia A. Vorholt   NATURE REVIEWS MICROBIOLOGY

Increased Transfer of a Multidrug Resistance Plasmid in Escherichia coli Biofilms at the Air-Liquid Interface

(2011) Jaroslaw E. Król et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

On the meaning and estimation of plasmid transfer rates for surface-associated and well-mixed bacterial populations

(2011) Xue Zhong et al.   JOURNAL OF THEORETICAL BIOLOGY

The Behavior and Significance of Degradative Plasmids Belonging to Inc Groups in Pseudomonas within Natural Environments and Microcosms

(2010) Masaki Shintani et al.   MICROBES AND ENVIRONMENTS

Genome Sequence of the Plant Growth Promoting Endophytic Bacterium Enterobacter sp. 638

(2010) Safiyh Taghavi et al.   PLoS Genetics

Resistance Plasmid Families in Enterobacteriaceae

(2009) A. Carattoli   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Priming of plant innate immunity by rhizobacteria and β-aminobutyric acid: differences and similarities in regulation

(2009) Sjoerd Van der Ent et al.   NEW PHYTOLOGIST

All IncP-1 plasmid subgroups, including the novel ε subgroup, are prevalent in the influent of a Danish wastewater treatment plant

(2009) Martin Iain Bahl et al.   PLASMID

Plant growth-promoting bacteria in the rhizo- and endosphere of plants: Their role, colonization, mechanisms involved and prospects for utilization

(2009) Stéphane Compant et al.   SOIL BIOLOGY & BIOCHEMISTRY

Phyllosphere microbiology with special reference to diversity and plant genotype

(2008) J.M. Whipps et al.   JOURNAL OF APPLIED MICROBIOLOGY

Properties of bacterial endophytes and their proposed role in plant growth

(2008) Pablo R. Hardoim et al.   TRENDS IN MICROBIOLOGY