Conceptualizing microbe–plasmid communities as complex adaptive systems
Published 2023 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Conceptualizing microbe–plasmid communities as complex adaptive systems
Authors
Keywords
-
Journal
TRENDS IN MICROBIOLOGY
Volume 31, Issue 7, Pages 672-680
Publisher
Elsevier BV
Online
2023-02-22
DOI
10.1016/j.tim.2023.01.007
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Multilayer networks of plasmid genetic similarity reveal potential pathways of gene transmission
- (2023) Julie Teresa Shapiro et al. ISME Journal
- Fitness effects of plasmids shape the structure of bacteria–plasmid interaction networks
- (2022) Arthur Newbury et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Beyond horizontal gene transfer: the role of plasmids in bacterial evolution
- (2021) Jerónimo Rodríguez-Beltrán et al. NATURE REVIEWS MICROBIOLOGY
- Network Analysis: Ten Years Shining Light on Host–Parasite Interactions
- (2021) Rogini Runghen et al. TRENDS IN PARASITOLOGY
- Modeling the ecology of parasitic plasmids
- (2021) Jaime G. Lopez et al. ISME Journal
- Variability of plasmid fitness effects contributes to plasmid persistence in bacterial communities
- (2021) Aida Alonso-del Valle et al. Nature Communications
- Community context matters for bacteria-phage ecology and evolution
- (2021) Michael Blazanin et al. ISME Journal
- The dilution effect limits plasmid horizontal transmission in multispecies bacterial communities
- (2021) Anastasia Kottara et al. MICROBIOLOGY-SGM
- Plasmid co-infection: linking biological mechanisms to ecological and evolutionary dynamics
- (2021) Claudia Igler et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Ecological and evolutionary solutions to the plasmid paradox
- (2021) Michael A. Brockhurst et al. TRENDS IN MICROBIOLOGY
- Mathematical Models of Plasmid Population Dynamics
- (2021) José Carlos Ramón Hernández-Beltrán et al. Frontiers in Microbiology
- Coevolution of host–plasmid pairs facilitates the emergence of novel multidrug resistance
- (2020) Hannah Jordt et al. Nature Ecology & Evolution
- Darwinian individuality of extrachromosomal genetic elements calls for population genetics tinkering
- (2020) Ana Garoña et al. Environmental Microbiology Reports
- Plasmid Interactions Can Improve Plasmid Persistence in Bacterial Populations
- (2020) João Alves Gama et al. Frontiers in Microbiology
- The network structure and eco-evolutionary dynamics of CRISPR-induced immune diversification
- (2020) Shai Pilosof et al. Nature Ecology & Evolution
- Interactions between plasmids and other mobile genetic elements affect their transmission and persistence
- (2019) Francisco Dionisio et al. PLASMID
- Coevolutionary dynamics shape the structure of bacteria‐phage infection networks
- (2019) Miguel A. Fortuna et al. EVOLUTION
- Emergence of plasmid stability under non-selective conditions maintains antibiotic resistance
- (2019) Tanita Wein et al. Nature Communications
- Competition for hosts modulates vast antigenic diversity to generate persistent strain structure in Plasmodium falciparum
- (2019) Shai Pilosof et al. PLOS BIOLOGY
- Mathematical modelling to study the horizontal transfer of antimicrobial resistance genes in bacteria: current state of the field and recommendations
- (2019) Quentin J. Leclerc et al. Journal of the Royal Society Interface
- Unravelling plasmidome distribution and interaction with its hosting microbiome
- (2019) Aya Brown Kav et al. ENVIRONMENTAL MICROBIOLOGY
- Type IV CRISPR–Cas systems are highly diverse and involved in competition between plasmids
- (2019) Rafael Pinilla-Redondo et al. NUCLEIC ACIDS RESEARCH
- High-order interactions distort the functional landscape of microbial consortia
- (2019) Alicia Sanchez-Gorostiaga et al. PLOS BIOLOGY
- Networks of genetic similarity reveal non-neutral processes shape strain structure in Plasmodium falciparum
- (2018) Qixin He et al. Nature Communications
- Seeing the forest for the trees: Putting multilayer networks to work for community ecology
- (2018) Matthew C. Hutchinson et al. FUNCTIONAL ECOLOGY
- Conjugation efficiency depends on intra and intercellular interactions between distinct plasmids: Plasmids promote the immigration of other plasmids but repress co-colonizing plasmids
- (2017) João Alves Gama et al. PLASMID
- The evolution of plasmid stability: Are infectious transmission and compensatory evolution competing evolutionary trajectories?
- (2017) James P.J. Hall et al. PLASMID
- PifC and Osa, Plasmid Weapons against Rival Conjugative Coupling Proteins
- (2017) María Getino et al. Frontiers in Microbiology
- Plasmid Classification in an Era of Whole-Genome Sequencing: Application in Studies of Antibiotic Resistance Epidemiology
- (2017) Alex Orlek et al. Frontiers in Microbiology
- The multilayer nature of ecological networks
- (2017) Shai Pilosof et al. Nature Ecology & Evolution
- Lateral gene transfer, bacterial genome evolution, and the Anthropocene
- (2016) Michael R. Gillings Annals of the New York Academy of Sciences
- Phylogenomic networks reveal limited phylogenetic range of lateral gene transfer by transduction
- (2016) Ovidiu Popa et al. ISME Journal
- Source–sink plasmid transfer dynamics maintain gene mobility in soil bacterial communities
- (2016) James P. J. Hall et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Network-Thinking: Graphs to Analyze Microbial Complexity and Evolution
- (2016) Eduardo Corel et al. TRENDS IN MICROBIOLOGY
- The ecology of the microbiome: Networks, competition, and stability
- (2015) K. Z. Coyte et al. SCIENCE
- Bacteriophages Limit the Existence Conditions for Conjugative Plasmids
- (2015) Ellie Harrison et al. mBio
- Dynamics in microbial communities: unraveling mechanisms to identify principles
- (2014) Allan Konopka et al. ISME Journal
- Host–parasite network structure is associated with community-level immunogenetic diversity
- (2014) Shai Pilosof et al. Nature Communications
- Positive epistasis between co-infecting plasmids promotes plasmid survival in bacterial populations
- (2013) Alvaro San Millan et al. ISME Journal
- Coevolutionary diversification creates nested-modular structure in phage-bacteria interaction networks
- (2013) S. J. Beckett et al. Interface Focus
- Process-based models are required to manage ecological systems in a changing world
- (2013) K. Cuddington et al. Ecosphere
- Phage–bacteria infection networks
- (2012) Joshua S. Weitz et al. TRENDS IN MICROBIOLOGY
- Microbial Co-occurrence Relationships in the Human Microbiome
- (2012) Karoline Faust et al. PLoS Computational Biology
- Statistical structure of host-phage interactions
- (2011) C. O. Flores et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Mobility of Plasmids
- (2010) C. Smillie et al. MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS
- Bacteriophage resistance mechanisms
- (2010) Simon J. Labrie et al. NATURE REVIEWS MICROBIOLOGY
- Why is entry exclusion an essential feature of conjugative plasmids?
- (2008) M. Pilar Garcillán-Barcia et al. PLASMID
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreAdd your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload Now