Signatures of selection and host-adapted gene expression of thePhytophthora infestansRNA silencing suppressor PSR2

Filamentous pathogen effectors interfering with small RNA silencing in plant hosts

(2016) Wenwu Ye et al.   CURRENT OPINION IN MICROBIOLOGY

Phytophthora infestans Argonaute 1 binds microRNA and small RNAs from effector genes and transposable elements

(2016) Anna K. M. Åsman et al.   NEW PHYTOLOGIST

Fungal Effectors and Plant Susceptibility

(2015) Libera Lo Presti et al.   Annual Review of Plant Biology

A dynamic evolutionary and functional landscape of plant phased small interfering RNAs

(2015) Yi Zheng et al.   BMC BIOLOGY

Evolutionarily Dynamic, but Robust, Targeting of Resistance Genes by the miR482/2118 Gene Family in the Solanaceae

(2015) Sophie de Vries et al.   Genome Biology and Evolution

Genomic Characterization of a South AmericanPhytophthoraHybrid Mandates Reassessment of the Geographic Origins ofPhytophthora infestans

(2015) Michael D. Martin et al.   MOLECULAR BIOLOGY AND EVOLUTION

Transcriptional dynamics ofPhytophthora infestansduring sequential stages of hemibiotrophic infection of tomato

(2015) Andrea P. Zuluaga et al.   MOLECULAR PLANT PATHOLOGY

A Recent Expansion of the RXLR Effector Gene Avrblb2 Is Maintained in Global Populations of Phytophthora infestans Indicating Different Contributions to Virulence

(2015) Ricardo F. Oliva et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Spatiotemporally dynamic, cell-type–dependent premeiotic and meiotic phasiRNAs in maize anthers

(2015) Jixian Zhai et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Diversity, Biogenesis, and Activities of Endogenous Silencing Small RNAs inArabidopsis

(2014) Nicolas G. Bologna et al.   Annual Review of Plant Biology

Phytophthora Suppressor of RNA Silencing 2 Is a Conserved RxLR Effector that Promotes Infection in Soybean and Arabidopsis thaliana

(2014) Qin Xiong et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Effectors as Tools in Disease Resistance Breeding Against Biotrophic, Hemibiotrophic, and Necrotrophic Plant Pathogens

(2014) Vivianne G. A. A. Vleeshouwers et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

The Arabidopsis miR472-RDR6 Silencing Pathway Modulates PAMP- and Effector-Triggered Immunity through the Post-transcriptional Control of Disease Resistance Genes

(2014) Martine Boccara et al.   PLoS Pathogens

Global and local perturbation of the tomato microRNA pathway by atrans-activatedDICER-LIKE 1mutant

(2013) Michael Kravchik et al.   JOURNAL OF EXPERIMENTAL BOTANY

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Oomycete pathogens encode RNA silencing suppressors

(2013) Yongli Qiao et al.   NATURE GENETICS

RNA silencing suppression by plant pathogens: defence, counter-defence and counter-counter-defence

(2013) Nathan Pumplin et al.   NATURE REVIEWS MICROBIOLOGY

Phased, Secondary, Small Interfering RNAs in Posttranscriptional Regulatory Networks

(2013) Q. Fei et al.   PLANT CELL

Biogenesis, Turnover, and Mode of Action of Plant MicroRNAs

(2013) K. Rogers et al.   PLANT CELL

Identification and Characterisation CRN Effectors in Phytophthora capsici Shows Modularity and Functional Diversity

(2013) Remco Stam et al.   PLoS One

Phytophthora Have Distinct Endogenous Small RNA Populations That Include Short Interfering and microRNAs

(2013) Noah Fahlgren et al.   PLoS One

Transgenerational gene silencing causes gain of virulence in a plant pathogen

(2013) Dinah Qutob et al.   Nature Communications

Primer-BLAST: A tool to design target-specific primers for polymerase chain reaction

(2012) Jian Ye et al.   BMC BIOINFORMATICS

A MicroRNA Superfamily Regulates Nucleotide Binding Site-Leucine-Rich Repeats and Other mRNAs

(2012) P. V. Shivaprasad et al.   PLANT CELL

The developmental outcomes of P0-mediated ARGONAUTE destabilization in tomato

(2012) Anat Hendelman et al.   PLANTA

Evidence for Small RNAs Homologous to Effector-Encoding Genes and Transposable Elements in the Oomycete Phytophthora infestans

(2012) Ramesh R. Vetukuri et al.   PLoS One

Genome Analyses of an Aggressive and Invasive Lineage of the Irish Potato Famine Pathogen

(2012) David E. L. Cooke et al.   PLoS Pathogens

MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs

(2011) J. Zhai et al.   GENES & DEVELOPMENT

Structures ofPhytophthoraRXLR Effector Proteins

(2011) Laurence S. Boutemy et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Transcriptional Programming and Functional Interactions within thePhytophthora sojaeRXLR Effector Repertoire

(2011) Qunqing Wang et al.   PLANT CELL

Cell signalling by microRNA165/6 directs gene dose-dependent root cell fate

(2010) Annelie Carlsbecker et al.   NATURE

Unique functionality of 22-nt miRNAs in triggering RDR6-dependent siRNA biogenesis from target transcripts in Arabidopsis

(2010) Josh T Cuperus et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

A secreted effector protein (SNE1) from Phytophthora infestans is a broadly acting suppressor of programmed cell death

(2010) Brendan S. Kelley et al.   PLANT JOURNAL

22-nucleotide RNAs trigger secondary siRNA biogenesis in plants

(2010) H.-M. Chen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Ancient class of translocated oomycete effectors targets the host nucleus

(2010) S. Schornack et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genome Evolution Following Host Jumps in the Irish Potato Famine Pathogen Lineage

(2010) S. Raffaele et al.   SCIENCE

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

(2009) P. Librado et al.   BIOINFORMATICS

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans

(2009) Brian J. Haas et al.   NATURE

In Planta Expression Screens of Phytophthora infestans RXLR Effectors Reveal Diverse Phenotypes, Including Activation of the Solanum bulbocastanum Disease Resistance Protein Rpi-blb2

(2009) S.-K. Oh et al.   PLANT CELL

Uncovering Small RNA-Mediated Responses to Phosphate Deficiency in Arabidopsis by Deep Sequencing

(2009) L.-C. Hsieh et al.   PLANT PHYSIOLOGY

A novelPhytophthora infestanshaustorium-specific membrane protein is required for infection of potato

(2008) Anna O. Avrova et al.   CELLULAR MICROBIOLOGY

Natural variation reveals key amino acids in a downy mildew effector that alters recognition specificity by an Arabidopsis resistance gene

(2008) REBECCA L. ALLEN et al.   MOLECULAR PLANT PATHOLOGY

Gene Expression Profiling During Asexual Development of the Late Blight Pathogen Phytophthora infestans Reveals a Highly Dynamic Transcriptome

(2008) Howard S. Judelson et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

RXLR-Mediated Entry of Phytophthora sojae Effector Avr1b into Soybean Cells Does Not Require Pathogen-Encoded Machinery

(2008) D. Dou et al.   PLANT CELL

RXLR effector reservoir in two Phytophthora species is dominated by a single rapidly evolving superfamily with more than 700 members

(2008) R. H. Y. Jiang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA