Genomic Characterization of a South AmericanPhytophthoraHybrid Mandates Reassessment of the Geographic Origins ofPhytophthora infestans

Mitochondrial genome sequences reveal evolutionary relationships of the Phytophthora 1c clade species

(2015) Erica S. Lassiter et al.   CURRENT GENETICS

Five Reasons to Consider Phytophthora infestans a Reemerging Pathogen

(2015) W. E. Fry et al.   PHYTOPATHOLOGY

Persistence of the Mitochondrial Lineage Responsible for the Irish Potato Famine in Extant New World Phytophthora infestans

(2014) Michael D. Martin et al.   MOLECULAR BIOLOGY AND EVOLUTION

Discriminating Micropathogen Lineages and Their Reticulate Evolution through Graph Theory-Based Network Analysis: The Case of Trypanosoma cruzi, the Agent of Chagas Disease

(2014) Sophie Arnaud-Haond et al.   PLoS One

The Irish potato famine pathogen Phytophthora infestans originated in central Mexico rather than the Andes

(2014) E. M. Goss et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Calculation of Tajima’s D and other neutrality test statistics from low depth next-generation sequencing data

(2013) Thorfinn Sand Korneliussen et al.   BMC BIOINFORMATICS

Quantifying Population Genetic Differentiation from Next-Generation Sequencing Data

(2013) Matteo Fumagalli et al.   GENETICS

Estimating Individual Admixture Proportions from Next Generation Sequencing Data

(2013) Line Skotte et al.   GENETICS

Reconstructing genome evolution in historic samples of the Irish potato famine pathogen

(2013) Michael D. Martin et al.   Nature Communications

The early days of late blight

(2013) Paul RJ Birch et al.   eLife

The rise and fall of the Phytophthora infestans lineage that triggered the Irish potato famine

(2013) Kentaro Yoshida et al.   eLife

PhytophthoraBeyond Agriculture

(2012) Everett M. Hansen et al.   Annual Review of Phytopathology

Bayesian Phylogenetics with BEAUti and the BEAST 1.7

(2012) Alexei J. Drummond et al.   MOLECULAR BIOLOGY AND EVOLUTION

Fast Computation and Applications of Genome Mappability

(2012) Thomas Derrien et al.   PLoS One

Species Tree Estimation for the Late Blight Pathogen, Phytophthora infestans, and Close Relatives

(2012) Jaime E. Blair et al.   PLoS One

SNP Calling, Genotype Calling, and Sample Allele Frequency Estimation from New-Generation Sequencing Data

(2012) Rasmus Nielsen et al.   PLoS One

Rethinking dog domestication by integrating genetics, archeology, and biogeography

(2012) G. Larson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Inference of Population Splits and Mixtures from Genome-Wide Allele Frequency Data

(2012) Joseph K. Pickrell et al.   PLoS Genetics

Genetic diversity of Phytophthora infestans in the Northern Andean region

(2011) Martha Cárdenas et al.   BMC GENETICS

Testing for Ancient Admixture between Closely Related Populations

(2011) Eric Y. Durand et al.   MOLECULAR BIOLOGY AND EVOLUTION

Time-dependent rates of molecular evolution

(2011) SIMON Y. W. HO et al.   MOLECULAR ECOLOGY

A rebuttal to the letter to the editor concerning ‘Defining species boundaries in the genus Phytophthora: the case of Phytophthora andina’

(2011) G. A. Forbes et al.   PLANT PATHOLOGY

The Plant Pathogen Phytophthora andina Emerged via Hybridization of an Unknown Phytophthora Species and the Irish Potato Famine Pathogen, P. infestans

(2011) Erica M. Goss et al.   PLoS One

Phytophthora andina sp. nov., a newly identified heterothallic pathogen of solanaceous hosts in the Andean highlands

(2010) R. F. Oliva et al.   PLANT PATHOLOGY

Genome Evolution Following Host Jumps in the Irish Potato Famine Pathogen Lineage

(2010) S. Raffaele et al.   SCIENCE

A Draft Sequence of the Neandertal Genome

(2010) R. E. Green et al.   SCIENCE

Ancient isolation and independent evolution of the three clonal lineages of the exotic sudden oak death pathogenPhytophthora ramorum

(2009) E. M. GOSS et al.   MOLECULAR ECOLOGY

Gene pools in wild Lima bean (Phaseolus lunatus L.) from the Americas: Evidences for an Andean origin and past migrations

(2009) Martha L. Serrano-Serrano et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans

(2009) Brian J. Haas et al.   NATURE

The Effect of Ambiguous Data on Phylogenetic Estimates Obtained by Maximum Likelihood and Bayesian Inference

(2009) Alan R. Lemmon et al.   SYSTEMATIC BIOLOGY

Smooth Skyride through a Rough Skyline: Bayesian Coalescent-Based Inference of Population Dynamics

(2008) V. N. Minin et al.   MOLECULAR BIOLOGY AND EVOLUTION

Phytophthora infestans: the plant (and R gene) destroyer

(2008) WILLIAM FRY   MOLECULAR PLANT PATHOLOGY

Phylogenetic relationships of Phytophthora andina, a new species from the highlands of Ecuador that is closely related to the Irish potato famine pathogen Phytophthora infestans

(2008) Luis Gómez-Alpizar et al.   MYCOLOGIA