Identifying Sex-Specific Serum Patterns of Alzheimer’s Mice through Deep TMT Profiling and a Concentration-Dependent Concatenation Strategy

Longitudinal amyloid and tau PET imaging in Alzheimer's disease: A systematic review of methodologies and factors affecting quantification

(2023) Ariane Bollack et al.   Alzheimers & Dementia

Dissecting detergent-insoluble proteome in Alzheimer's disease by TMTc-corrected quantitative mass spectrometry

(2023) Masihuz Zaman et al.   MOLECULAR & CELLULAR PROTEOMICS

Compilation of reported protein changes in the brain in Alzheimer’s disease

(2023) Manor Askenazi et al.   Nature Communications

Large-scale deep multi-layer analysis of Alzheimer’s disease brain reveals strong proteomic disease-related changes not observed at the RNA level

(2022) Erik C. B. Johnson et al.   NATURE NEUROSCIENCE

Hepcidin and Iron in Health and Disease

(2022) Elizabeta Nemeth et al.   Annual Review of Medicine

Temporal and sex-linked protein expression dynamics in a familial model of Alzheimer’s Disease

(2022) Filipa Blasco Tavares Pereira Lopes et al.   MOLECULAR & CELLULAR PROTEOMICS

JUMPptm: Integrated software for sensitive identification of post‐translational modifications and its application in Alzheimer's disease study

(2022) Suresh Poudel et al.   PROTEOMICS

Multi-platform proteomic analysis of Alzheimer’s disease cerebrospinal fluid and plasma reveals network biomarkers associated with proteostasis and the matrisome

(2022) Eric B. Dammer et al.   Alzheimers Research & Therapy

TMTpro-18plex: The Expanded and Complete Set of TMTpro Reagents for Sample Multiplexing

(2021) Jiaming Li et al.   JOURNAL OF PROTEOME RESEARCH

In-depth site-specific analysis of N-glycoproteome in human cerebrospinal fluid (CSF) and glycosylation landscape changes in Alzheimer's disease (AD)

(2021) Zhengwei Chen et al.   MOLECULAR & CELLULAR PROTEOMICS

Large‐scale plasma proteomic profiling identifies a high‐performance biomarker panel for Alzheimer's disease screening and staging

(2021) Yuanbing Jiang et al.   Alzheimers & Dementia

Fibrinogen-like protein 1 (FGL1): the next immune checkpoint target

(2021) Wenjing Qian et al.   Journal of Hematology & Oncology

Proteomic landscape of Alzheimer’s Disease: novel insights into pathogenesis and biomarker discovery

(2021) Bing Bai et al.   Molecular Neurodegeneration

Plasma Proteomic Biomarkers Relating to Alzheimer’s Disease: A Meta-Analysis Based on Our Own Studies

(2021) Liu Shi et al.   Frontiers in Aging Neuroscience

JUMPn: A Streamlined Application for Protein Co-Expression Clustering and Network Analysis in Proteomics

(2021) David Vanderwall et al.   Jove-Journal of Visualized Experiments

Alpha-2-Macroglobulin in Inflammation, Immunity and Infections

(2021) Jennifer Vandooren et al.   Frontiers in Immunology

Deep Multilayer Brain Proteomics Identifies Molecular Networks in Alzheimer’s Disease Progression

(2020) Bing Bai et al.   NEURON

27-Plex Tandem Mass Tag Mass Spectrometry for Profiling Brain Proteome in Alzheimer’s Disease

(2020) Zhen Wang et al.   ANALYTICAL CHEMISTRY

Proteomic Profiling of Plasma and Brain Tissue from Alzheimer’s Disease Patients Reveals Candidate Network of Plasma Biomarkers

(2020) Mei Chen et al.   JOURNAL OF ALZHEIMERS DISEASE

Blood plasma phosphorylated-tau isoforms track CNS change in Alzheimer’s disease

(2020) Nicolas R. Barthélemy et al.   JOURNAL OF EXPERIMENTAL MEDICINE

Integrated analysis of ultra-deep proteomes in cortex, cerebrospinal fluid and serum reveals a mitochondrial signature in Alzheimer’s disease

(2020) Hong Wang et al.   Molecular Neurodegeneration

Proteome profiling in cerebrospinal fluid reveals novel biomarkers of Alzheimer's disease

(2020) Jakob M Bader et al.   Molecular Systems Biology

Integrated proteomics reveals brain-based cerebrospinal fluid biomarkers in asymptomatic and symptomatic Alzheimer’s disease

(2020) Lenora Higginbotham et al.   Science Advances

Deep undepleted human serum proteome profiling toward biomarker discovery for Alzheimer’s disease

(2019) Kaushik Kumar Dey et al.   Clinical Proteomics

Deep multiomics profiling of brain tumors identifies signaling networks downstream of cancer driver genes

(2019) Hong Wang et al.   Nature Communications

Carboxylesterase 1 and Precision Pharmacotherapy: Pharmacogenetics and Nongenetic Regulators

(2019) Lucy Her et al.   DRUG METABOLISM AND DISPOSITION

Targeting fibrinogen‐like protein 1 is a novel therapeutic strategy to combat obesity

(2019) Hung‐Tsung Wu et al.   FASEB JOURNAL

Biomarkers for Alzheimer's disease: current status and prospects for the future

(2018) K. Blennow et al.   JOURNAL OF INTERNAL MEDICINE

Fibrinogen-like Protein 1 Is a Major Immune Inhibitory Ligand of LAG-3

(2018) Jun Wang et al.   CELL

STRING v11: protein–protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets

(2018) Damian Szklarczyk et al.   NUCLEIC ACIDS RESEARCH

Quantitative proteomic profiling of cerebrospinal fluid to identify candidate biomarkers for Alzheimer's disease

(2018) Gajanan Sathe et al.   Proteomics Clinical Applications

Revisiting biomarker discovery by plasma proteomics

(2017) Philipp E Geyer et al.   Molecular Systems Biology

Major urinary protein levels are associated with social status and context in mouse social hierarchies

(2017) Won Lee et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

The amyloid hypothesis of Alzheimer's disease at 25 years

(2016) Dennis J Selkoe et al.   EMBO Molecular Medicine

JUMPg: An Integrative Proteogenomics Pipeline Identifying Unannotated Proteins in Human Brain and Cancer Cells

(2016) Yuxin Li et al.   JOURNAL OF PROTEOME RESEARCH

The ProteomeXchange consortium in 2017: supporting the cultural change in proteomics public data deposition

(2016) Eric W. Deutsch et al.   NUCLEIC ACIDS RESEARCH

Complement and microglia mediate early synapse loss in Alzheimer mouse models

(2016) S. Hong et al.   SCIENCE

Sex Difference of Egfr Expression and Molecular Pathway in the Liver: Impact on Drug Design and Cancer Treatments?

(2016) Lishi Wang et al.   Journal of Cancer

Hepassocin is required for hepatic outgrowth during zebrafish hepatogenesis

(2015) Ming Gao et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Social dominance-related major urinary proteins and the regulatory mechanism in mice

(2015) Huifen GUO et al.   Integrative Zoology

Tissue-based map of the human proteome

(2015) M. Uhlen et al.   SCIENCE

Sex Differences in Iron Status and Hepcidin Expression in Rats

(2014) Wei-Na Kong et al.   BIOLOGICAL TRACE ELEMENT RESEARCH

Integrated Approaches for Analyzing U1-70K Cleavage in Alzheimer’s Disease

(2014) Bing Bai et al.   JOURNAL OF PROTEOME RESEARCH

JUMP: A Tag-based Database Search Tool for Peptide Identification with High Sensitivity and Accuracy

(2014) Xusheng Wang et al.   MOLECULAR & CELLULAR PROTEOMICS

The Coming Age of Complete, Accurate, and Ubiquitous Proteomes

(2013) Matthias Mann et al.   MOLECULAR CELL

Plasma Proteome Database as a resource for proteomics research: 2014 update

(2013) Vishalakshi Nanjappa et al.   NUCLEIC ACIDS RESEARCH

Targeted Deletion of Fibrinogen Like Protein 1 Reveals a Novel Role in Energy Substrate Utilization

(2013) Valeriy Demchev et al.   PLoS One

U1 small nuclear ribonucleoprotein complex and RNA splicing alterations in Alzheimer's disease

(2013) B. Bai et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Sequence-specific determination of protein and peptide concentrations by absorbance at 205 nm

(2013) Nicholas J. Anthis et al.   PROTEIN SCIENCE

The Complement System: An Unexpected Role in Synaptic Pruning During Development and Disease

(2012) Alexander H. Stephan et al.   Annual Review of Neuroscience

Hepcidin and iron homeostasis

(2012) Tomas Ganz et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH

The diagnosis of dementia due to Alzheimer’s disease: Recommendations from the National Institute on Aging-Alzheimer’s Association workgroups on diagnostic guidelines for Alzheimer's disease

(2011) Guy M. McKhann et al.   Alzheimers & Dementia

Serpin structure, function and dysfunction

(2011) J. A. HUNTINGTON   JOURNAL OF THROMBOSIS AND HAEMOSTASIS

Reversed-phase chromatography with multiple fraction concatenation strategy for proteome profiling of human MCF10A cells

(2011) Yuexi Wang et al.   PROTEOMICS

The complement system

(2010) J. Vidya Sarma et al.   CELL AND TISSUE RESEARCH

Depletion of Abundant Plasma Proteins and Limitations of Plasma Proteomics

(2010) Chengjian Tu et al.   JOURNAL OF PROTEOME RESEARCH

The use of PET in Alzheimer disease

(2010) Agneta Nordberg et al.   Nature Reviews Neurology

Systematical Optimization of Reverse-Phase Chromatography for Shotgun Proteomics

(2009) Ping Xu et al.   JOURNAL OF PROTEOME RESEARCH

Standard Operating Procedures for Serum and Plasma Collection: Early Detection Research Network Consensus StatementStandard Operating Procedure Integration Working Group

(2008) Melissa K. Tuck et al.   JOURNAL OF PROTEOME RESEARCH