Untapped rich microbiota of mangroves of Pakistan: diversity and community compositions
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Title
Untapped rich microbiota of mangroves of Pakistan: diversity and community compositions
Authors
Keywords
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Journal
FOLIA MICROBIOLOGICA
Volume -, Issue -, Pages -
Publisher
Springer Science and Business Media LLC
Online
2023-10-16
DOI
10.1007/s12223-023-01095-3
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- (2019) Anamika Dubey et al. BIODIVERSITY AND CONSERVATION
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- A statistical toolbox for metagenomics: assessing functional diversity in microbial communities
- (2008) Patrick D Schloss et al. BMC BIOINFORMATICS
- Metagenomic signatures of the Peru Margin subseafloor biosphere show a genetically distinct environment
- (2008) J. F. Biddle et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
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