Soil microbiomes and climate change

Effect of permafrost thaw on plant and soil fungal community in a boreal forest: Does fungal community change mediate plant productivity response?

(2019) Ursel M. E. Schütte et al.   JOURNAL OF ECOLOGY

Permafrost collapse is accelerating carbon release

(2019) Merritt R. Turetsky et al.   NATURE

Scientists’ warning to humanity: microorganisms and climate change

(2019) Ricardo Cavicchioli et al.   NATURE REVIEWS MICROBIOLOGY

Responses of tundra soil microbial communities to half a decade of experimental warming at two critical depths

(2019) Eric R. Johnston et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Metaphenomic Responses of a Native Prairie Soil Microbiome to Moisture Perturbations

(2019) Taniya Roy Chowdhury et al.   mSystems

Evolutionary history constrains microbial traits across environmental variation

(2019) Ember M. Morrissey et al.   Nature Ecology & Evolution

The soil microbiome — from metagenomics to metaphenomics

(2018) Janet K Jansson et al.   CURRENT OPINION IN MICROBIOLOGY

Disentangling the complexity of permafrost soil by using high resolution profiling of microbial community composition, key functions and respiration rates

(2018) Oliver Müller et al.   ENVIRONMENTAL MICROBIOLOGY

Methanotrophy across a natural permafrost thaw environment

(2018) Caitlin M Singleton et al.   ISME Journal

Climate-smart crops with enhanced photosynthesis

(2018) Christer Jansson et al.   JOURNAL OF EXPERIMENTAL BOTANY

Can Saltwater Intrusion Accelerate Nutrient Export from Freshwater Wetland Soils? An Experimental Approach

(2018) Havalend E. Steinmuller et al.   SOIL SCIENCE SOCIETY OF AMERICA JOURNAL

Wetlands In a Changing Climate: Science, Policy and Management

(2018) William R. Moomaw et al.   WETLANDS

Distinct responses of soil respiration to experimental litter manipulation in temperate woodland and tropical forest

(2018) Laëtitia M. Bréchet et al.   Ecology and Evolution

Drought Stress and Root-Associated Bacterial Communities

(2018) Dan Naylor et al.   Frontiers in Plant Science

Host-linked soil viral ecology along a permafrost thaw gradient

(2018) Joanne B. Emerson et al.   Nature Microbiology

Belowground response of prairie restoration and resiliency to drought

(2018) Racheal N. Upton et al.   AGRICULTURE ECOSYSTEMS & ENVIRONMENT

Life in Dry Soils: Effects of Drought on Soil Microbial Communities and Processes

(2018) Joshua P. Schimel   Annual Review of Ecology Evolution and Systematics

Globally rising soil heterotrophic respiration over recent decades

(2018) Ben Bond-Lamberty et al.   NATURE

Genome-centric view of carbon processing in thawing permafrost

(2018) Ben J. Woodcroft et al.   NATURE

Soil bacterial networks are less stable under drought than fungal networks

(2018) Franciska T. de Vries et al.   Nature Communications

Climate warming leads to divergent succession of grassland microbial communities

(2018) Xue Guo et al.   Nature Climate Change

Elevated CO2 and Warming Altered Grassland Microbial Communities in Soil Top-Layers

(2018) Hao Yu et al.   Frontiers in Microbiology

Drought increases the frequencies of fungal functional genes related to carbon and nitrogen acquisition

(2018) Kathleen K. Treseder et al.   PLoS One

Soil Viruses Are Underexplored Players in Ecosystem Carbon Processing

(2018) Gareth Trubl et al.   mSystems

Drought and host selection influence bacterial community dynamics in the grass root microbiome

(2017) Dan Naylor et al.   ISME Journal

Forest Soil Bacteria: Diversity, Involvement in Ecosystem Processes, and Response to Global Change

(2017) Salvador Lladó et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

A communal catalogue reveals Earth’s multiscale microbial diversity

(2017) Luke R. Thompson et al.   NATURE

Emerging role of wetland methane emissions in driving 21st century climate change

(2017) Zhen Zhang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Long-term pattern and magnitude of soil carbon feedback to the climate system in a warming world

(2017) J. M. Melillo et al.   SCIENCE

Spatial and temporal dynamics of nitrogen fixing, nitrifying and denitrifying microbes in an unfertilized grassland soil

(2017) Kathleen Regan et al.   SOIL BIOLOGY & BIOCHEMISTRY

Partial drying accelerates bacterial growth recovery to rewetting

(2017) Annelein Meisner et al.   SOIL BIOLOGY & BIOCHEMISTRY

Metagenomic reconstruction of nitrogen cycling pathways in a CO 2 -enriched grassland ecosystem

(2017) Qichao Tu et al.   SOIL BIOLOGY & BIOCHEMISTRY

Soil carbon and nitrogen dynamics throughout the summer drought in a California annual grassland

(2017) Sean M. Schaeffer et al.   SOIL BIOLOGY & BIOCHEMISTRY

Soil microbes and their response to experimental warming over time: A meta-analysis of field studies

(2017) A.L. Romero-Olivares et al.   SOIL BIOLOGY & BIOCHEMISTRY

Using Prokaryotes for Carbon Capture Storage

(2017) Natalie Hicks et al.   TRENDS IN BIOTECHNOLOGY

Modeling Global Soil Carbon and Soil Microbial Carbon by Integrating Microbial Processes into the Ecosystem Process Model TRIPLEX-GHG

(2017) Kefeng Wang et al.   Journal of Advances in Modeling Earth Systems

Enhanced Drought Stress Tolerance by the Arbuscular Mycorrhizal Symbiosis in a Drought-Sensitive Maize Cultivar Is Related to a Broader and Differential Regulation of Host Plant Aquaporins than in a Drought-Tolerant Cultivar

(2017) Gabriela Quiroga et al.   Frontiers in Plant Science

Significant Impacts of Increasing Aridity on the Arid Soil Microbiome

(2017) Julia W. Neilson et al.   mSystems

Microbial community response to hydration-desiccation cycles in desert soil

(2017) Adam Šťovíček et al.   Scientific Reports

Permafrost Meta-Omics and Climate Change

(2016) Rachel Mackelprang et al.   Annual Review of Earth and Planetary Sciences

Contrasting effects of winter snowpack and soil frost on growing season microbial biomass and enzyme activity in two mixed-hardwood forests

(2016) Patrick O. Sorensen et al.   BIOGEOCHEMISTRY

Microbial interactions and community assembly at microscales

(2016) Otto X Cordero et al.   CURRENT OPINION IN MICROBIOLOGY

Enhancement of drought stress tolerance in crops by plant growth promoting rhizobacteria

(2016) Sai Shiva Krishna Prasad Vurukonda et al.   MICROBIOLOGICAL RESEARCH

The terrestrial biosphere as a net source of greenhouse gases to the atmosphere

(2016) Hanqin Tian et al.   NATURE

Post-fire soil functionality and microbial community structure in a Mediterranean shrubland subjected to experimental drought

(2016) M. Belén Hinojosa et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Fungal Community Shifts in Structure and Function across a Boreal Forest Fire Chronosequence

(2015) Hui Sun et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Climate Change and Physical Disturbance Manipulations Result in Distinct Biological Soil Crust Communities

(2015) Blaire Steven et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Climate Warming and Soil Carbon in Tropical Forests: Insights from an Elevation Gradient in the Peruvian Andes

(2015) Andrew T. Nottingham et al.   BIOSCIENCE

Climate change and the permafrost carbon feedback

(2015) E. A. G. Schuur et al.   NATURE

Multi-omics of permafrost, active layer and thermokarst bog soil microbiomes

(2015) Jenni Hultman et al.   NATURE

Complete nitrification by a single microorganism

(2015) Maartje A. H. J. van Kessel et al.   NATURE

Model-data synthesis for the next generation of forest free-air CO2 enrichment (FACE) experiments

(2015) Richard J. Norby et al.   NEW PHYTOLOGIST

Autochthonous arbuscular mycorrhizal fungi and Bacillus thuringiensis from a degraded Mediterranean area can be used to improve physiological traits and performance of a plant of agronomic interest under drought conditions

(2015) Elisabeth Armada et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Redistribution of soil water by a saprotrophic fungus enhances carbon mineralization

(2015) Alexander Guhr et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Microbial hotspots and hot moments in soil: Concept & review

(2015) Yakov Kuzyakov et al.   SOIL BIOLOGY & BIOCHEMISTRY

Accelerated dryland expansion under climate change

(2015) Jianping Huang et al.   Nature Climate Change

Long-term forest soil warming alters microbial communities in temperate forest soils

(2015) Kristen M. DeAngelis et al.   Frontiers in Microbiology

Impact of fire on active layer and permafrost microbial communities and metagenomes in an upland Alaskan boreal forest

(2014) Neslihan Taş et al.   ISME Journal

Mycorrhiza-mediated competition between plants and decomposers drives soil carbon storage

(2014) Colin Averill et al.   NATURE

Responses of Soil Microbial Communities to Experimental Warming in Alpine Grasslands on the Qinghai-Tibet Plateau

(2014) Bin Zhang et al.   PLoS One

Faster Decomposition Under Increased Atmospheric CO2 Limits Soil Carbon Storage

(2014) K. J. van Groenigen et al.   SCIENCE

Global soil carbon: understanding and managing the largest terrestrial carbon pool

(2014) Jörn PW Scharlemann et al.   Carbon Management

Fungal Diversity in Permafrost and Tallgrass Prairie Soils under Experimental Warming Conditions

(2013) C. Ryan Penton et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Effect of salinity-altering pulsing events on soil organic carbon loss along an intertidal wetland gradient: a laboratory experiment

(2013) Lisa G. Chambers et al.   BIOGEOCHEMISTRY

Growth and death of bacteria and fungi underlie rainfall-induced carbon dioxide pulses from seasonally dried soil

(2013) Steven J. Blazewicz et al.   ECOLOGY

Climate change alters ecological strategies of soil bacteria

(2013) Sarah E. Evans et al.   ECOLOGY LETTERS

Labile carbon retention compensates for CO2released by priming in forest soils

(2013) Na Qiao et al.   GLOBAL CHANGE BIOLOGY

Responses of soil bacterial and fungal communities to extreme desiccation and rewetting

(2013) Romain L Barnard et al.   ISME Journal

Nitrous oxide emissions from soils: how well do we understand the processes and their controls?

(2013) K. Butterbach-Bahl et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Roots and Associated Fungi Drive Long-Term Carbon Sequestration in Boreal Forest

(2013) K. E. Clemmensen et al.   SCIENCE

Global soil carbon projections are improved by modelling microbial processes

(2013) William R. Wieder et al.   Nature Climate Change

Controls on soil microbial community stability under climate change

(2013) Franciska T. de Vries et al.   Frontiers in Microbiology

A trait-based approach for modelling microbial litter decomposition

(2012) S. D. Allison   ECOLOGY LETTERS

Common bacterial responses in six ecosystems exposed to 10 years of elevated atmospheric carbon dioxide

(2012) John Dunbar et al.   ENVIRONMENTAL MICROBIOLOGY

Changes in the microbial community structure of bacteria, archaea and fungi in response to elevated CO2and warming in an Australian native grassland soil

(2012) Helen L. Hayden et al.   ENVIRONMENTAL MICROBIOLOGY

Long-term warming alters the composition of Arctic soil microbial communities

(2012) Julie R. Deslippe et al.   FEMS MICROBIOLOGY ECOLOGY

Microbial colonization and controls in dryland systems

(2012) Stephen B. Pointing et al.   NATURE REVIEWS MICROBIOLOGY

Static osmolyte concentrations in microbial biomass during seasonal drought in a California grassland

(2012) Claudia M. Boot et al.   SOIL BIOLOGY & BIOCHEMISTRY

Microbial community response to varying magnitudes of desiccation in soil: A test of the osmolyte accumulation hypothesis

(2012) Madhavi L. Kakumanu et al.   SOIL BIOLOGY & BIOCHEMISTRY

Mitigation of nitrous oxide emissions from soils by Bradyrhizobium japonicum inoculation

(2012) Manabu Itakura et al.   Nature Climate Change

Evidence of a strong coupling between root exudation, C and N availability, and stimulated SOM decomposition caused by rhizosphere priming effects

(2012) Per Bengtson et al.   Ecology and Evolution

Microbial control over carbon cycling in soil

(2012) Joshua P. Schimel et al.   Frontiers in Microbiology

A better water status in wheat seedlings induced by Azospirillum under osmotic stress is related to morphological changes in xylem vessels of the coleoptile

(2011) M.A. Pereyra et al.   APPLIED SOIL ECOLOGY

Fire effects on temperate forest soil C and N storage

(2011) Lucas E. Nave et al.   ECOLOGICAL APPLICATIONS

Increases in the flux of carbon belowground stimulate nitrogen uptake and sustain the long-term enhancement of forest productivity under elevated CO2

(2011) John E. Drake et al.   ECOLOGY LETTERS

Elevated CO2 stimulates grassland soil respiration by increasing carbon inputs rather than by enhancing soil moisture

(2011) E. Carol Adair et al.   GLOBAL CHANGE BIOLOGY

Effect of warming and drought on grassland microbial communities

(2011) Cody S Sheik et al.   ISME Journal

Burning Fire-Prone Mediterranean Shrublands: Immediate Changes in Soil Microbial Community Structure and Ecosystem Functions

(2011) M. Goberna et al.   MICROBIAL ECOLOGY

Metagenomic analysis of a permafrost microbial community reveals a rapid response to thaw

(2011) Rachel Mackelprang et al.   NATURE

Persistence of soil organic matter as an ecosystem property

(2011) Michael W. I. Schmidt et al.   NATURE

Experimental warming effects on the microbial community of a temperate mountain forest soil

(2011) A. Schindlbacher et al.   SOIL BIOLOGY & BIOCHEMISTRY

Microbial mediation of carbon-cycle feedbacks to climate warming

(2011) Jizhong Zhou et al.   Nature Climate Change

Low Pore Connectivity Increases Bacterial Diversity in Soil

(2010) J. K. Carson et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Phytosequestration: Carbon Biosequestration by Plants and the Prospects of Genetic Engineering

(2010) Christer Jansson et al.   BIOSCIENCE

Hydration-controlled bacterial motility and dispersal on surfaces

(2010) A. Dechesne et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Priming effects: Interactions between living and dead organic matter

(2010) Yakov Kuzyakov   SOIL BIOLOGY & BIOCHEMISTRY

The influence of precipitation pulses on soil respiration – Assessing the “Birch effect” by stable carbon isotopes

(2010) Stephan Unger et al.   SOIL BIOLOGY & BIOCHEMISTRY

Soil organic carbon pools in the northern circumpolar permafrost region

(2009) C. Tarnocai et al.   GLOBAL BIOGEOCHEMICAL CYCLES

Adapt or disperse: understanding species persistence in a changing world

(2009) MATTY P. BERG et al.   GLOBAL CHANGE BIOLOGY

Carbon flow in the rhizosphere: carbon trading at the soil–root interface

(2009) D. L. Jones et al.   PLANT AND SOIL

Evidence for biological nitrification inhibition in Brachiaria pastures

(2009) G. V. Subbarao et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Thermal adaptation of soil microbial respiration to elevated temperature

(2008) Mark A. Bradford et al.   ECOLOGY LETTERS

Farming the planet: 1. Geographic distribution of global agricultural lands in the year 2000

(2008) Navin Ramankutty et al.   GLOBAL BIOGEOCHEMICAL CYCLES

Warming and drying suppress microbial activity and carbon cycling in boreal forest soils

(2008) STEVEN D. ALLISON et al.   GLOBAL CHANGE BIOLOGY

Terrestrial ecosystem carbon dynamics and climate feedbacks

(2008) Martin Heimann et al.   NATURE

Microbial biomass, functional capacity, and community structure after 12 years of soil warming

(2008) S.D. Frey et al.   SOIL BIOLOGY & BIOCHEMISTRY