Enhanced Photo-Cross-Linking of Thymines in DNA Holliday Junction-Templated Squaraine Dimers

Molecular Dynamic Studies of Dye–Dye and Dye–DNA Interactions Governing Excitonic Coupling in Squaraine Aggregates Templated by DNA Holliday Junctions

(2023) German Barcenas et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Exciton Delocalization in a DNA-Templated Organic Semiconductor Dimer Assembly

(2022) Xiao Wang et al.   ACS Nano

Influence of Hydrophobicity on Excitonic Coupling in DNA-Templated Indolenine Squaraine Dye Aggregates

(2022) Olga A. Mass et al.   Journal of Physical Chemistry C

Photocrosslinking Probes Proximity of Thymine Modifiers Tethering Excitonically Coupled Dye Aggregates to DNA Holliday Junction

(2022) Shibani Basu et al.   MOLECULES

DNA Self-Assembly of Single Molecules with Deterministic Position and Orientation

(2022) Aleksandra K. Adamczyk et al.   ACS Nano

Exciton Chirality Inversion in Dye Dimers Templated by DNA Holliday Junction

(2022) Olga A. Mass et al.   Journal of Physical Chemistry Letters

Engineering couplings for exciton transport using synthetic DNA scaffolds

(2021) Stephanie M. Hart et al.   Chem

Beneficial and Detrimental Effects of Reactive Oxygen Species on Lifespan: A Comprehensive Review of Comparative and Experimental Studies

(2021) Hazel J. Shields et al.   Frontiers in Cell and Developmental Biology

Exciton Delocalization and Scaffold Stability in Bridged Nucleotide-Substituted, DNA Duplex-Templated Cyanine Aggregates

(2021) Simon K. Roy et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Alkyne–Alkene [2 + 2] cycloaddition based on visible light photocatalysis

(2020) Sujin Ha et al.   Nature Communications

Complete Photochemical Regulation of 8–17 DNAzyme Activity by Using Reversible DNA Photo‐crosslinking

(2020) Yasuha Watanabe et al.   CHEMBIOCHEM

Exciton Delocalization in Indolenine Squaraine Aggregates Templated by DNA Holliday Junction Scaffolds

(2020) Olga A. Mass et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Squaraine Dyes: Molecular Design for Different Applications and Remaining Challenges

(2019) Kristina Ilina et al.   BIOCONJUGATE CHEMISTRY

Large Davydov Splitting and Strong Fluorescence Suppression: An Investigation of Exciton Delocalization in DNA-Templated Holliday Junction Dye Aggregates

(2018) Brittany L. Cannon et al.   JOURNAL OF PHYSICAL CHEMISTRY A

Optical Properties of Vibronically Coupled Cy3 Dimers on DNA Scaffolds

(2018) Paul D. Cunningham et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Sequence-programmable covalent bonding of designed DNA assemblies

(2018) Thomas Gerling et al.   Science Advances

Squaraine dyes: The hierarchical synthesis and its application in optical detection

(2017) Guomin Xia et al.   JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY C-PHOTOCHEMISTRY REVIEWS

Oxidative Stress: Harms and Benefits for Human Health

(2017) Gabriele Pizzino et al.   Oxidative Medicine and Cellular Longevity

The Cartography of UV-induced DNA Damage Formation and DNA Repair

(2017) Jinchuan Hu et al.   PHOTOCHEMISTRY AND PHOTOBIOLOGY

Recent Advances in the Synthesis of Cyclobutanes by Olefin [2 + 2] Photocycloaddition Reactions

(2016) Saner Poplata et al.   CHEMICAL REVIEWS

Organic Optoelectronic Materials: Mechanisms and Applications

(2016) Oksana Ostroverkhova   CHEMICAL REVIEWS

Near-Infrared Squaraine Dye Encapsulated Micelles for in Vivo Fluorescence and Photoacoustic Bimodal Imaging

(2015) Sivaramapanicker Sreejith et al.   ACS Nano

Squaraine as a bright, stable and environment-sensitive far-red label for receptor-specific cellular imaging

(2015) I. A. Karpenko et al.   CHEMICAL COMMUNICATIONS

Nanoscale Resonance Energy Transfer-Based Devices for Probabilistic Computing

(2015) Siyang Wang et al.   IEEE MICRO

DNA Photo-Cross-Linking Using 3-Cyanovinylcarbazole Modified Oligonucleotide with Threoninol Linker

(2015) Takashi Sakamoto et al.   ORGANIC LETTERS

Programmable materials and the nature of the DNA bond

(2015) M. R. Jones et al.   SCIENCE

Photoswitchable Formation of a DNA Interstrand Cross-Link by a Coumarin-Modified Nucleotide

(2014) Mohammad Mojibul Haque et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Exciton delocalization, charge transfer, and electronic coupling for singlet excitation energy transfer between stacked nucleobases in DNA: An MS-CASPT2 study

(2014) Lluís Blancafort et al.   JOURNAL OF CHEMICAL PHYSICS

Perspective: Detecting and measuring exciton delocalization in photosynthetic light harvesting

(2014) Gregory D. Scholes et al.   JOURNAL OF CHEMICAL PHYSICS

Resonance Energy Transfer in DNA Duplexes Labeled with Localized Dyes

(2014) Paul D. Cunningham et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Triplex-directed covalent cross-linking of a DNA nanostructure

(2012) David A. Rusling et al.   CHEMICAL COMMUNICATIONS

Coherent interactions of dyes assembled on DNA

(2012) Hiroyuki Asanuma et al.   JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY C-PHOTOCHEMISTRY REVIEWS

NIH Image to ImageJ: 25 years of image analysis

(2012) Caroline A Schneider et al.   NATURE METHODS

Synthesis and properties of squaraine-modified DNA

(2012) Larysa I. Markova et al.   ORGANIC & BIOMOLECULAR CHEMISTRY

Unsymmetrical Squaraines Incorporating Quinoline for Near Infrared Responsive Dye-Sensitized Solar Cells

(2012) Jheng-Ying Li et al.   ORGANIC LETTERS

A DNA-Based Light-Harvesting Antenna

(2011) Florian Garo et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

5-Methylcytosine Selective Photoligation Using Photoresponsive Oligonucleotides Containing Various 5-Vinyl-2′-deoxyuridines Having an Aromatic Group

(2011) Takashi Sakamoto et al.   CHEMISTRY LETTERS

Photo-Cross-Linking-Assisted Thermal Stability of DNA Origami Structures and Its Application for Higher-Temperature Self-Assembly

(2011) Arivazhagan Rajendran et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Arylamine-Based Squaraine Donors for Use in Organic Solar Cells

(2011) Guodan Wei et al.   NANO LETTERS

The DNA three-way junction as a mould for tripartite chromophore assembly

(2011) Markus Probst et al.   ORGANIC & BIOMOLECULAR CHEMISTRY

Squaraine-Doped Functional Nanoprobes: Lipophilically Protected Near-Infrared Fluorescence for Bioimaging

(2010) Yong-Deok Lee et al.   ADVANCED FUNCTIONAL MATERIALS

Nanomaterials Based on DNA

(2010) Nadrian C. Seeman   Annual Review of Biochemistry

DNA Damage and Interstrand Cross-Link Formation upon Irradiation of Aryl Iodide C-Nucleotide Analogues

(2010) Hui Ding et al.   JOURNAL OF ORGANIC CHEMISTRY

Coherent Multidimensional Optical Spectroscopy of Excitons in Molecular Aggregates; Quasiparticle versus Supermolecule Perspectives

(2009) Darius Abramavicius et al.   CHEMICAL REVIEWS

DNA-Assisted Self-Assembly of Pyrene Foldamers

(2009) Robert Häner et al.   CHEMISTRY-A EUROPEAN JOURNAL

Analysis of Coherent Heteroclustering of Different Dyes by Use of Threoninol Nucleotides for Comparison with the Molecular Exciton Theory

(2009) Taiga Fujii et al.   CHEMISTRY-A EUROPEAN JOURNAL

Oxygen Toxicity and Reactive Oxygen Species: The Devil Is in the Details

(2009) Richard L Auten et al.   PEDIATRIC RESEARCH

Extracting single and two-exciton couplings in photosynthetic complexes by coherent two-dimensional electronic spectra

(2008) Darius Abramavicius et al.   CHEMICAL PHYSICS

Fluorescent Labeling of Biomolecules with Organic Probes

(2008) M. Sameiro T. Gonçalves   CHEMICAL REVIEWS

Hybridization-Sensitive On–Off DNA Probe: Application of the Exciton Coupling Effect to Effective Fluorescence Quenching

(2008) Shuji Ikeda et al.   Chemistry-An Asian Journal