Molecular markers in tea plant (Camellia sinensis): Applications to evolution, genetic identification, and molecular breeding

Quantitative trait loci mapping for free amino acid content using an albino population and SNP markers provides insight into the genetic improvement of tea plants

(2022) Rong Huang et al.   Horticulture Research

The specific DNA barcodes based on chloroplast genes for species identification of Theaceae plants

(2022) Shuai Jiang et al.   PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS

Genetic analysis of the early bud flush trait of tea plants (Camellia sinensis) in the cultivar ‘Emei Wenchun’ and its open-pollinated offspring

(2022) Liqiang Tan et al.   Horticulture Research

Origin, evolution, breeding and omics of Apiaceae: a family of vegetables and medicinal plants

(2022) Xiao-Jing Wang et al.   Horticulture Research

Development and Application of SNP-KASP Markers Based on Genes Related to Nitrogen Uptake, Assimilation and Allocation in Tea Plant (Camellia sinensis L.)

(2022) Kai Fan et al.   Agronomy-Basel

TeaGVD: A comprehensive database of genomic variations for uncovering the genetic architecture of metabolic traits in tea plants

(2022) Jie-Dan Chen et al.   Frontiers in Plant Science

Construction of a DArT-seq marker–based genetic linkage map and identification of QTLs for yield in tea (Camellia sinensis (L.) O. Kuntze)

(2021) M. P. Malebe et al.   Tree Genetics & Genomes

Genome-wide association analysis identified molecular markers associated with important tea flavor-related metabolites

(2021) Kaixing Fang et al.   Horticulture Research

Genetic basis of high aroma and stress tolerance in the oolong tea cultivar genome

(2021) Pengjie Wang et al.   Horticulture Research

Haplotype-resolved genome assembly provides insights into evolutionary history of the tea plant Camellia sinensis

(2021) Xingtan Zhang et al.   NATURE GENETICS

Genome-level diversification of eight ancient tea populations in the Guizhou and Yunnan regions identifies candidate genes for core agronomic traits

(2021) Litang Lu et al.   Horticulture Research

Development of a genome‐wide 200K SNP array and its application for high‐density genetic mapping and origin analysis of Camellia sinensis

(2021) Kang Wei et al.   PLANT BIOTECHNOLOGY JOURNAL

Integrative genome, transcriptome, microRNA, and degradome analysis of water dropwort (Oenanthe javanica) in response to water stress

(2021) Jie-Xia Liu et al.   Horticulture Research

Identification and distribution of a single nucleotide polymorphism responsible for the catechin content in tea plants

(2020) Chen-Kai Jiang et al.   Horticulture Research

The reference genome of tea plant and resequencing of 81 diverse accessions provide insights into genome evolution and adaptation of tea plants

(2020) Enhua Xia et al.   Molecular Plant

Inheritance and quantitative trait loci analyses of the anthocyanins and catechins of Camellia sinensis cultivar ‘Ziyan’ with dark‐purple leaves

(2020) Li‐Qiang Tan et al.   PHYSIOLOGIA PLANTARUM

Development of core-collections for Guizhou tea genetic resources and GWAS of leaf size using SNP developed by genotyping-by-sequencing

(2020) Suzhen Niu et al.   PeerJ

Integrative transcriptome, proteome, and microRNA analysis reveals the effects of nitrogen sufficiency and deficiency conditions on theanine metabolism in the tea plant (Camellia sinensis)

(2020) Zhi-Wei Liu et al.   Horticulture Research

Population sequencing enhances understanding of tea plant evolution

(2020) Xinchao Wang et al.   Nature Communications

Genomic predictions and genome-wide association studies based on RAD-seq of quality-related metabolites for the genomics-assisted breeding of tea plants

(2020) Hiroto Yamashita et al.   Scientific Reports

Genome-wide SNP discovery from Darjeeling tea cultivars - their functional impacts and application toward population structure and trait associations

(2020) Anjan Hazra et al.   GENOMICS

A functional molecular marker for detecting blister blight disease resistance in tea (Camellia sinensis L.)

(2020) K. H. T. Karunarathna et al.   PLANT CELL REPORTS

Revealing Distinctions in Genetic Diversity and Adaptive Evolution Between Two Varieties of Camellia sinensis by Whole-Genome Resequencing

(2020) Yanlin An et al.   Frontiers in Plant Science

Tea Plant Information Archive ( TPIA ): A comprehensive genomics and bioinformatics platform for tea plant

(2019) En‐Hua Xia et al.   PLANT BIOTECHNOLOGY JOURNAL

Tea

(2019) Herb Brody   NATURE

Analysis of Genetic Diversity and Development of a SCAR Marker for Green Tea (Camellia sinensis) Cultivars in Zhejiang Province: The Most Famous Green Tea-Producing Area in China

(2019) Yan-Xia Xu et al.   BIOCHEMICAL GENETICS

Genetic diversity, linkage disequilibrium, and population structure analysis of the tea plant (Camellia sinensis) from an origin center, Guizhou plateau, using genome-wide SNPs developed by genotyping-by-sequencing

(2019) Suzhen Niu et al.   BMC PLANT BIOLOGY

A comparison of genetic stability in tea [Camellia sinensis (L.) Kuntze] plantlets derived from callus with plantlets from long-term in vitro propagation

(2019) Lidiia Samarina et al.   PLANT CELL TISSUE AND ORGAN CULTURE

Genome-Wide Association Study to Identify Favorable SNP Allelic Variations and Candidate Genes That Control the Timing of Spring Bud Flush of Tea (Camellia sinensis) Using SLAF-seq

(2019) Rang Jian Wang et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Analyses of single nucleotide polymorphisms identified by ddRAD-seq reveal genetic structure of tea germplasm and Japanese landraces for tea breeding

(2019) Hiroto Yamashita et al.   PLoS One

Assessment of Genetic Diversity of Tea Germplasm for Its Management and Sustainable Use in Korea Genebank

(2019) Kyung Jun Lee et al.   Forests

Plant microRNAs: biogenesis, gene silencing, web-based analysis tools and their use as molecular markers

(2019) Sandhya Tyagi et al.   3 Biotech

Characterization of genome-wide genetic variations between two varieties of tea plant (Camellia sinensis) and development of InDel markers for genetic research

(2019) Shengrui Liu et al.   BMC GENOMICS

Draft genome sequence ofCamellia sinensisvar.sinensisprovides insights into the evolution of the tea genome and tea quality

(2018) Chaoling Wei et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Identification of novel QTL for black tea quality traits and drought tolerance in tea plants (Camellia sinensis)

(2018) Robert K. Koech et al.   Tree Genetics & Genomes

Domestication Origin and Breeding History of the Tea Plant (Camellia sinensis) in China and India Based on Nuclear Microsatellites and cpDNA Sequence Data

(2018) Muditha K. Meegahakumbura et al.   Frontiers in Plant Science

Genetic diversity and structure of tea plant in Qinba area in China by three types of molecular markers

(2018) Yu Zhang et al.   HEREDITAS

A Novel F3'5'H Allele with 14 bp Deletion Is Associated with High Catechin Index Trait of Wild Tea Plants and Has Potential Use in Enhancing Tea Quality

(2018) Ji-Qiang Jin et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Differentially expressed protein and gene analysis revealed the effects of temperature on changes in ascorbic acid metabolism in harvested tea leaves

(2018) Hui Li et al.   Horticulture Research

High-density SNP linkage map construction and QTL mapping for flavonoid-related traits in a tea plant (Camellia sinensis) using 2b-RAD sequencing

(2018) Li-Yi Xu et al.   BMC GENOMICS

Quantitative Trait Loci Mapping for Theobromine and Caffeine Contents in Tea Plant (Camellia sinensis)

(2018) Jian-Qiang Ma et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Construction of a genetic linkage map based on RAPD, AFLP, and SSR markers for tea plant (Camellia sinensis)

(2017) Yali Chang et al.   EUPHYTICA

Construction of fingerprinting for tea plant (Camellia sinensis) accessions using new genomic SSR markers

(2017) Shengrui Liu et al.   MOLECULAR BREEDING

A genome-wide association study of wheat yield and quality-related traits in southwest China

(2017) Jing Liu et al.   MOLECULAR BREEDING

The Tea Tree Genome Provides Insights into Tea Flavor and Independent Evolution of Caffeine Biosynthesis

(2017) En-Hua Xia et al.   Molecular Plant

Trends in plant research using molecular markers

(2017) Jose Antonio Garrido-Cardenas et al.   PLANTA

Advancements in Next-Generation Sequencing

(2016) Shawn E. Levy et al.   Annual Review of Genomics and Human Genetics

Harnessing the power of RADseq for ecological and evolutionary genomics

(2016) Kimberly R. Andrews et al.   NATURE REVIEWS GENETICS

Association mapping of caffeine content with TCS1 in tea plant and its related species

(2016) Ji-Qiang Jin et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Functional natural allelic variants of flavonoid 3′,5′-hydroxylase gene governing catechin traits in tea plant and its relatives

(2016) Ji-Qiang Jin et al.   PLANTA

Indications for Three Independent Domestication Events for the Tea Plant (Camellia sinensis (L.) O. Kuntze) and New Insights into the Origin of Tea Germplasm in China and India Revealed by Nuclear Microsatellites

(2016) M. K. Meegahakumbura et al.   PLoS One

The Tubulin-Based-Polymorphism Method Provides a Simple and Effective Alternative to the Genomic Profiling of Grape

(2016) Floriana Gavazzi et al.   PLoS One

SSR-based genetic mapping and QTL analysis for timing of spring bud flush, young shoot color, and mature leaf size in tea plant (Camellia sinensis)

(2016) Li-Qiang Tan et al.   Tree Genetics & Genomes

Nuclear microsatellites reveal the genetic architecture and breeding history of tea germplasm of East Africa

(2016) M. C. Wambulwa et al.   Tree Genetics & Genomes

Insights into the Genetic Relationships and Breeding Patterns of the African Tea Germplasm Based on nSSR Markers and cpDNA Sequences

(2016) Moses C. Wambulwa et al.   Frontiers in Plant Science

An efficient identification strategy of clonal tea cultivars using long-core motif SSR markers

(2016) Rang Jian Wang et al.   SpringerPlus

Differential gene expression analysis of self-incompatible lines in tea by cDNA-AFLP

(2016) Chen Xuan et al.   AFRICAN JOURNAL OF BIOTECHNOLOGY

Comparative profiling of gene expression in Camellia sinensis L. cultivar AnJiBaiCha leaves during periodic albinism

(2015) Ling Yuan et al.   GENE

Heterozygosities and genetic relationship of tea cultivars revealed by simple sequence repeat markers and implications for breeding and genetic mapping programs

(2015) L.Q. Tan et al.   GENETICS AND MOLECULAR RESEARCH

Construction of a genetic linkage map and mapping of drought tolerance trait in Indian beveragial tea

(2015) Sapinder Bali et al.   MOLECULAR BREEDING

Biotechnological advances in tea (Camellia sinensis [L.] O. Kuntze): a review

(2015) Mainaak Mukhopadhyay et al.   PLANT CELL REPORTS

Fingerprinting 128 Chinese clonal tea cultivars using SSR markers provides new insights into their pedigree relationships

(2015) Li-Qiang Tan et al.   Tree Genetics & Genomes

Genetic diversity and domestication origin of tea plant Camellia taliensis (Theaceae) as revealed by microsatellite markers

(2014) Dong-wei Zhao et al.   BMC PLANT BIOLOGY

Development and use of molecular markers: past and present

(2014) Atul Grover et al.   CRITICAL REVIEWS IN BIOTECHNOLOGY

Development and characterization of single nucleotide polymorphism markers in Camellia sinensis (Theaceae)

(2014) C.C. Zhang et al.   GENETICS AND MOLECULAR RESEARCH

Construction of a SSR-Based Genetic Map and Identification of QTLs for Catechins Content in Tea Plant (Camellia sinensis)

(2014) Jian-Qiang Ma et al.   PLoS One

Worldwide core collections of tea (Camellia sinensis) based on SSR markers

(2014) Fumiya Taniguchi et al.   Tree Genetics & Genomes

Development of STS and CAPS markers for variety identification and genetic diversity analysis of tea germplasm in Taiwan

(2014) Chih-Yi Hu et al.   Botanical Studies

Varietal identification of tea (Camellia sinensis) using nanofluidic array of single nucleotide polymorphism (SNP) markers

(2014) Wan-Ping Fang et al.   Horticulture Research

Screening of Tea (Camellia sinensis) for Trait-Associated Molecular Markers

(2013) Nicholas I. K. Mphangwe et al.   APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY

Construction of an integrated genetic map based on maternal and paternal lineages of tea (Camellia sinensis)

(2013) Chih-Yi Hu et al.   EUPHYTICA

Development of a set of genomic microsatellite markers in tea (Camellia L.) (Camelliaceae)

(2013) Sapinder Bali et al.   MOLECULAR BREEDING

Single nucleotide polymorphism genotyping using Kompetitive Allele Specific PCR (KASP): overview of the technology and its application in crop improvement

(2013) Kassa Semagn et al.   MOLECULAR BREEDING

MicroRNA-based molecular markers: a novel PCR-based genotyping technique inBrassicaspecies

(2013) Donghui Fu et al.   PLANT BREEDING

Development and utilization of genomic and genic microsatellite markers in Assam tea (Camellia assamicassp.assamica) and relatedCamelliaspecies

(2013) Pankaj Bhardwaj et al.   PLANT BREEDING

Floral Transcriptome Sequencing for SSR Marker Development and Linkage Map Construction in the Tea Plant (Camellia sinensis)

(2013) Li-Qiang Tan et al.   PLoS One

Expressed sequence tags from organ-specific cDNA libraries of tea (Camellia sinensis) and polymorphisms and transferability of EST-SSRs across Camellia species

(2012) Fumiya Taniguchi et al.   BREEDING SCIENCE

Construction of a high-density reference linkage map of tea (Camellia sinensis)

(2012) Fumiya Taniguchi et al.   BREEDING SCIENCE

Molecular Analysis of Drought Tolerance in Tea by cDNA-AFLP Based Transcript Profiling

(2012) Sushmita Gupta et al.   MOLECULAR BIOTECHNOLOGY

De Novo Characterization of Leaf Transcriptome Using 454 Sequencing and Development of EST-SSR Markers in Tea (Camellia sinensis)

(2012) Hualing Wu et al.   PLANT MOLECULAR BIOLOGY REPORTER

Identification and cross-species transferability of 112 novel unigene-derived microsatellite markers in tea (Camellia sinensis )

(2011) Himanshu Sharma et al.   AMERICAN JOURNAL OF BOTANY

Genetic structure and diversity of India hybrid tea

(2011) S. N. Raina et al.   GENETIC RESOURCES AND CROP EVOLUTION

Development of Expressed Sequence Tag (EST)-Based Cleaved Amplified Polymorphic Sequence (CAPS) Markers of Tea Plant and Their Application to Cultivar Identification

(2011) Tomomi Ujihara et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Differential gene expression in tea (Camellia sinensis L.) calli with different morphologies and catechin contents

(2011) Dongqing Yang et al.   JOURNAL OF PLANT PHYSIOLOGY

Genome-wide genetic marker discovery and genotyping using next-generation sequencing

(2011) John W. Davey et al.   NATURE REVIEWS GENETICS

Genetic diversity and relationship of clonal tea (Camellia sinensis) cultivars in China as revealed by SSR markers

(2011) W. Fang et al.   PLANT SYSTEMATICS AND EVOLUTION

Microsatellite markers from tea plant expressed sequence tags (ESTs) and their applicability for cross-species/genera amplification and genetic mapping

(2011) Jian-Qiang Ma et al.   SCIENTIA HORTICULTURAE

Diversity distribution and population structure of tea germplasms in China revealed by EST-SSR markers

(2011) Ming-Zhe Yao et al.   Tree Genetics & Genomes

AFLP-Based Genetic Diversity Assessment of Commercially Important Tea Germplasm in India

(2010) R. K. Sharma et al.   BIOCHEMICAL GENETICS

Analysis of plant diversity with retrotransposon-based molecular markers

(2010) R Kalendar et al.   HEREDITY

Identification of Japanese and Chinese Green Tea Cultivars by Using Simple Sequence Repeat Markers to Encourage Proper Labeling

(2009) Tomomi UJIHARA et al.   BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY

Identification, characterization and utilization of unigene derived microsatellite markers in tea (Camellia sinensis L.)

(2009) Ram Sharma et al.   BMC PLANT BIOLOGY

Detection and characterization of caffeine-less tea plants originated from interspecific hybridization

(2009) Akiko Ogino et al.   BREEDING SCIENCE

High Level of Genetic Diversity Among the Selected Accessions of Tea (Camellia sinensis) from Abandoned Tea Gardens in Western Himalaya

(2008) S. Karthigeyan et al.   BIOCHEMICAL GENETICS

Genetic diversity among tea cultivars from China, Japan and Kenya revealed by ISSR markers and its implication for parental selection in tea breeding programmes

(2008) M. Z. Yao et al.   PLANT BREEDING

Marker-assisted selection: an approach for precision plant breeding in the twenty-first century

(2007) B. C.Y Collard et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES