Biogeographic patterns of biosynthetic potential and specialized metabolites in marine sediments

Small Spatial Scale Drivers of Secondary Metabolite Biosynthetic Diversity in Environmental Microbiomes

(2023) Aileen Ute Geers et al.   mSystems

Distinguishing the molecular diversity, nutrient content, and energetic potential of exometabolomes produced by macroalgae and reef-building corals  

(2022) Linda Wegley Kelly et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Reef Sediments Can Act As a Stony Coral Tissue Loss Disease Vector

(2022) Michael S. Studivan et al.   Frontiers in Marine Science

Bacterial species rarely work together

(2022) Jacob D. Palmer et al.   SCIENCE

Microbial metabolites in the marine carbon cycle

(2022) Mary Ann Moran et al.   Nature Microbiology

Functional modulation of chemical mediators in microbial communities

(2022) Pierre Stallforth et al.   TRENDS IN BIOCHEMICAL SCIENCES

Selection, drift and community interactions shape microbial biogeographic patterns in the Pacific Ocean

(2022) Felix Milke et al.   ISME Journal

The Natural Product Domain Seeker version 2 (NaPDoS2) webtool relates ketosynthase phylogeny to biosynthetic function

(2022) Leesa J. Klau et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Microbiome composition modulates secondary metabolism in a multispecies bacterial community

(2022) Marc G. Chevrette et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Standardized multi-omics of Earth’s microbiomes reveals microbial and metabolite diversity

(2022) Justin P. Shaffer et al.   Nature Microbiology

A community resource for paired genomic and metabolomic data mining

(2021) Michelle A. Schorn et al.   Nature Chemical Biology

Presence of Bromotyrosine Alkaloids in Marine Sponges Is Independent of Metabolomic and Microbiome Architectures

(2021) Ipsita Mohanty et al.   mSystems

Diel investments in metabolite production and consumption in a model microbial system

(2021) Mario Uchimiya et al.   ISME Journal

Vertical Inheritance Facilitates Interspecies Diversification in Biosynthetic Gene Clusters and Specialized Metabolites

(2021) Alexander B. Chase et al.   mBio

Nitrogen pollution interacts with heat stress to increase coral bleaching across the seascape

(2020) Mary K. Donovan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A multiomic analysis of in situ coral–turf algal interactions

(2020) Ty N. F. Roach et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Bacterial Secondary Metabolite Biosynthetic Potential in Soil Varies with Phylum, Depth, and Vegetation Type

(2020) Allison M. Sharrar et al.   mBio

Landscape‐scale patterns of nutrient enrichment in a coral reef ecosystem: implications for coral to algae phase shifts

(2020) Thomas C. Adam et al.   ECOLOGICAL APPLICATIONS

Rapid evolution destabilizes species interactions in a fluctuating environment

(2020) Alejandra Rodríguez-Verdugo et al.   ISME Journal

Feature-based molecular networking in the GNPS analysis environment

(2020) Louis-Félix Nothias et al.   NATURE METHODS

A Phylogenetic and Functional Perspective on Volatile Organic Compound Production by Actinobacteria

(2019) Mallory Choudoir et al.   mSystems

The Detection of Natural Products and Their Producers in Ocean Sediments

(2019) Robert N. Tuttle et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Microbe-driven chemical ecology: past, present and future

(2019) Ruth Schmidt et al.   ISME Journal

Taxonomic and Metabolic Incongruence in the Ancient Genus Streptomyces

(2019) Marc G. Chevrette et al.   Frontiers in Microbiology

Novel soil bacteria possess diverse genes for secondary metabolite biosynthesis

(2018) Alexander Crits-Christoph et al.   NATURE

Emerging evolutionary paradigms in antibiotic discovery

(2018) Marc G. Chevrette et al.   JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY

Dereplication of microbial metabolites through database search of mass spectra

(2018) Hosein Mohimani et al.   Nature Communications

A communal catalogue reveals Earth’s multiscale microbial diversity

(2017) Luke R. Thompson et al.   NATURE

Bacterial natural product biosynthetic domain composition in soil correlates with changes in latitude on a continent-wide scale

(2017) Christophe Lemetre et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Ecological Role of Volatile and Soluble Secondary Metabolites Produced by Soil Bacteria

(2017) Olaf Tyc et al.   TRENDS IN MICROBIOLOGY

Microdiversity shapes the traits, niche space, and biogeography of microbial taxa

(2017) Alyse A. Larkin et al.   Environmental Microbiology Reports

Novel reductive dehalogenases from the marine sponge associated bacterium Desulfoluna spongiiphila

(2017) Jie Liu et al.   Environmental Microbiology Reports

Microdiversity of an Abundant Terrestrial Bacterium Encompasses Extensive Variation in Ecologically Relevant Traits

(2017) Alexander B. Chase et al.   mBio

Microbial communities in marine sediments modify success of an invasive macrophyte

(2017) Paul E. Gribben et al.   Scientific Reports

Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking

(2016) Mingxun Wang et al.   NATURE BIOTECHNOLOGY

Marine natural products

(2015) John W. Blunt et al.   NATURAL PRODUCT REPORTS

Determinants of community structure in the global plankton interactome

(2015) G. Lima-Mendez et al.   SCIENCE

Mass spectrometry of natural products: current, emerging and future technologies

(2014) Amina Bouslimani et al.   NATURAL PRODUCT REPORTS

Chemical-biogeographic survey of secondary metabolism in soil

(2014) Z. Charlop-Powers et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Endemism and functional convergence across the North American soil mycobiome

(2014) J. M. Talbot et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Local genomic adaptation of coral reef-associated microbiomes to gradients of natural variability and anthropogenic stressors

(2014) L. W. Kelly et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Diversity and evolution of secondary metabolism in the marine actinomycete genus Salinispora

(2014) N. Ziemert et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Salimabromide: Unexpected Chemistry from the Obligate Marine MyxobacteriumEnhygromxya salina

(2013) Stephan Felder et al.   CHEMISTRY-A EUROPEAN JOURNAL

Natural Product Biosynthetic Gene Diversity in Geographically Distinct Soil Microbiomes

(2012) Boojala Vijay B. Reddy et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Beyond biogeographic patterns: processes shaping the microbial landscape

(2012) China A. Hanson et al.   NATURE REVIEWS MICROBIOLOGY

Drivers of bacterial  -diversity depend on spatial scale

(2011) J. B. H. Martiny et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

When can we distinguish between neutral and non-neutral processes in community dynamics under ecological drift?

(2009) Lasse Ruokolainen et al.   ECOLOGY LETTERS

Quorum sensing and social networking in the microbial world

(2009) S. Atkinson et al.   Journal of the Royal Society Interface

Hantupeptins B and C, cytotoxic cyclodepsipeptides from the marine cyanobacterium Lyngbya majuscula

(2009) Ashootosh Tripathi et al.   PHYTOCHEMISTRY

Hantupeptin A, a Cytotoxic Cyclic Depsipeptide from a Singapore Collection ofLyngbya majuscula

(2008) Ashootosh Tripathi et al.   JOURNAL OF NATURAL PRODUCTS