Novel reductive dehalogenases from the marine sponge associated bacterium Desulfoluna spongiiphila

The MarR-Type Regulator Rdh2R Regulates rdh Gene Transcription in Dehalococcoides mccartyi Strain CBDB1

(2016) Lydia Krasper et al.   JOURNAL OF BACTERIOLOGY

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Organohalide Respiring Bacteria and Reductive Dehalogenases: Key Tools in Organohalide Bioremediation

(2016) Bat-Erdene Jugder et al.   Frontiers in Microbiology

Microbial dehalogenation of organohalides in marine and estuarine environments

(2015) Giulio Zanaroli et al.   CURRENT OPINION IN BIOTECHNOLOGY

Anaerobic Microbial Transformation of Halogenated Aromatics and Fate Prediction Using Electron Density Modeling

(2015) Myriel Cooper et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Reductive Dehalogenation of Oligocyclic Phenolic Bromoaromatics by Dehalococcoides mccartyi Strain CBDB1

(2015) Chao Yang et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Reductive Dehalogenases Come of Age in Biological Destruction of Organohalides

(2015) Bat-Erdene Jugder et al.   TRENDS IN BIOTECHNOLOGY

Functional genomics of corrinoid starvation in the organohalide-respiring bacterium Dehalobacter restrictus strain PER-K23

(2015) Aamani Rupakula et al.   Frontiers in Microbiology

Sustainable Growth of Dehalococcoides mccartyi 195 by Corrinoid Salvaging and Remodeling in Defined Lactate-Fermenting Consortia

(2014) Yujie Men et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Insights into organohalide respiration and the versatile catabolism ofSulfurospirillum multivoransgained from comparative genomics and physiological studies

(2014) Tobias Goris et al.   ENVIRONMENTAL MICROBIOLOGY

Reductive dehalogenase structure suggests a mechanism for B12-dependent dehalogenation

(2014) Karl A. P. Payne et al.   NATURE

Genomic characterization of three unique Dehalococcoides that respire on persistent polychlorinated biphenyls

(2014) S. Wang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Structural basis for organohalide respiration

(2014) Martin Bommer et al.   SCIENCE

Exogenous 5,6-dimethylbenzimidazole caused production of a non-functional tetrachloroethene reductive dehalogenase inSulfurospirillum multivorans

(2013) Sebastian Keller et al.   ENVIRONMENTAL MICROBIOLOGY

Degradation, Metabolism, and Bound-Residue Formation and Release of Tetrabromobisphenol A in Soil during Sequential Anoxic–Oxic Incubation

(2013) Jie Liu et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Diversity of Cobalamin Riboswitches in the Corrinoid-Producing Organohalide Respirer Desulfitobacterium hafniense

(2013) P. K. Choudhary et al.   JOURNAL OF BACTERIOLOGY

Regulation of reductive dehalogenase gene transcription in Dehalococcoides mccartyi

(2013) A. Wagner et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Distribution of dehalogenation activity in subseafloor sediments of the Nankai Trough subduction zone

(2013) T. Futagami et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Guided cobalamin biosynthesis supports Dehalococcoides mccartyi reductive dechlorination activity

(2013) J. Yan et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

The transcriptional regulator CprK detects chlorination by combining direct and indirect readout mechanisms

(2013) L. R. Kemp et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Overview of organohalide-respiring bacteria and a proposal for a classification system for reductive dehalogenases

(2013) L. A. Hug et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Versatility in Corrinoid Salvaging and Remodeling Pathways Supports Corrinoid-Dependent Metabolism in Dehalococcoides mccartyi

(2012) Shan Yi et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

LocTree2 predicts localization for all domains of life

(2012) Tatyana Goldberg et al.   BIOINFORMATICS

TrAnsFuSE refines the search for protein function: oxidoreductases

(2012) Arye Harel et al.   Integrative Biology

The Role of Bacterial Enhancer Binding Proteins as Specialized Activators of  54-Dependent Transcription

(2012) M. Bush et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Genomic insights into the marine sponge microbiome

(2012) Ute Hentschel et al.   NATURE REVIEWS MICROBIOLOGY

Physiological Adaptation of Desulfitobacterium hafniense Strain TCE1 to Tetrachloroethene Respiration

(2011) Laure Prat et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Complete Debromination of Tetra- and Penta-Brominated Diphenyl Ethers by a Coculture Consisting ofDehalococcoidesandDesulfovibrioSpecies

(2011) Lip Kim Lee et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Global transcriptome analysis of the tetrachloroethene-dechlorinating bacterium Desulfitobacterium hafniense Y51 in the presence of various electron donors and terminal electron acceptors

(2011) Xue Peng et al.   JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY

High-quality draft assemblies of mammalian genomes from massively parallel sequence data

(2010) S. Gnerre et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Exploiting the ecogenomics toolbox for environmental diagnostics of organohalide-respiring bacteria

(2010) Farai Maphosa et al.   TRENDS IN BIOTECHNOLOGY

Dehalogenation Activities and Distribution of Reductive Dehalogenase Homologous Genes in Marine Subsurface Sediments

(2009) T. Futagami et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Reductive dehalogenation of brominated ethenes bySulfurospirillum multivoransandDesulfitobacterium hafniensePCE-S

(2009) Lidan Ye et al.   ENVIRONMENTAL MICROBIOLOGY

Desulfoluna spongiiphila sp. nov., a dehalogenating bacterium in the Desulfobacteraceae from the marine sponge Aplysina aerophoba

(2009) Y.-B. Ahn et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH