Vertical Inheritance Facilitates Interspecies Diversification in Biosynthetic Gene Clusters and Specialized Metabolites
Published 2021 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Vertical Inheritance Facilitates Interspecies Diversification in Biosynthetic Gene Clusters and Specialized Metabolites
Authors
Keywords
-
Journal
mBio
Volume 12, Issue 6, Pages -
Publisher
American Society for Microbiology
Online
2021-11-23
DOI
10.1128/mbio.02700-21
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- A community resource for paired genomic and metabolomic data mining
- (2021) Michelle A. Schorn et al. Nature Chemical Biology
- Rhodococcus comparative genomics reveals a phylogenomic-dependent non-ribosomal peptide synthetase distribution: insights into biosynthetic gene cluster connection to an orphan metabolite
- (2021) Agustina Undabarrena et al. Microbial Genomics
- The architecture of metabolism maximizes biosynthetic diversity in the largest class of fungi
- (2020) Emile Gluck-Thaler et al. MOLECULAR BIOLOGY AND EVOLUTION
- Six novel species of the obligate marine actinobacterium Salinispora, Salinispora cortesiana sp. nov., Salinispora fenicalii sp. nov., Salinispora goodfellowii sp. nov., Salinispora mooreana sp. nov., Salinispora oceanensis sp. nov. and Salinispora vitiensis sp. nov., and emended description of the genus Salinispora
- (2020) Brenda Román-Ponce et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- A Phylogenetic and Functional Perspective on Volatile Organic Compound Production by Actinobacteria
- (2019) Mallory Choudoir et al. mSystems
- The Detection of Natural Products and Their Producers in Ocean Sediments
- (2019) Robert N. Tuttle et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- antiSMASH 5.0: updates to the secondary metabolite genome mining pipeline
- (2019) Kai Blin et al. NUCLEIC ACIDS RESEARCH
- Emergence of trait variability through the lens of nitrogen assimilation in Prochlorococcus
- (2019) Paul M Berube et al. eLife
- Microbe-driven chemical ecology: past, present and future
- (2019) Ruth Schmidt et al. ISME Journal
- A Reverse Ecology Approach Based on a Biological Definition of Microbial Populations
- (2019) Philip Arevalo et al. CELL
- A pharmaceutical model for the molecular evolution of microbial natural products
- (2019) David P. Fewer et al. FEBS Journal
- Maintenance of Sympatric and Allopatric Populations in Free-Living Terrestrial Bacteria
- (2019) Alexander B. Chase et al. mBio
- Gene gain and loss push prokaryotes beyond the homologous recombination barrier and accelerate genome sequence divergence
- (2019) Jaime Iranzo et al. Nature Communications
- Comparative genomics reveals phylogenetic distribution patterns of secondary metabolites in Amycolatopsis species
- (2018) Martina Adamek et al. BMC GENOMICS
- Correlating chemical diversity with taxonomic distance for discovery of natural products in myxobacteria
- (2018) Thomas Hoffmann et al. Nature Communications
- Emergence of Soil Bacterial Ecotypes Along a Climate Gradient
- (2018) Alexander B. Chase et al. ENVIRONMENTAL MICROBIOLOGY
- Emerging evolutionary paradigms in antibiotic discovery
- (2018) Marc G. Chevrette et al. JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY
- Genomic insights into specialized metabolism in the marine actinomycete Salinispora
- (2017) Anne-Catrin Letzel et al. ENVIRONMENTAL MICROBIOLOGY
- Function-related replacement of bacterial siderophore pathways
- (2017) Hilke Bruns et al. ISME Journal
- Comparative transcriptomics as a guide to natural product discovery and biosynthetic gene cluster functionality
- (2017) Gregory C. A. Amos et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Microdiversity shapes the traits, niche space, and biogeography of microbial taxa
- (2017) Alyse A. Larkin et al. Environmental Microbiology Reports
- Lateral Gene Transfer Dynamics in the Ancient Bacterial Genus Streptomyces
- (2017) Bradon R. McDonald et al. mBio
- Microdiversity of an Abundant Terrestrial Bacterium Encompasses Extensive Variation in Ecologically Relevant Traits
- (2017) Alexander B. Chase et al. mBio
- Drivers of genetic diversity in secondary metabolic gene clusters within a fungal species
- (2017) Abigail L. Lind et al. PLOS BIOLOGY
- Predicted microbial secretomes and their target substrates in marine sediment
- (2017) William D. Orsi et al. Nature Microbiology
- Phylogenomic Insight into Salinispora (Bacteria, Actinobacteria) Species Designations
- (2017) Natalie Millán-Aguiñaga et al. Scientific Reports
- Gene Flow and Molecular Innovation in Bacteria
- (2016) Antonio C. Ruzzini et al. CURRENT BIOLOGY
- BlastKOALA and GhostKOALA: KEGG Tools for Functional Characterization of Genome and Metagenome Sequences
- (2016) Minoru Kanehisa et al. JOURNAL OF MOLECULAR BIOLOGY
- Natural Products and the Gene Cluster Revolution
- (2016) Paul R. Jensen TRENDS IN MICROBIOLOGY
- Roary: rapid large-scale prokaryote pan genome analysis
- (2015) Andrew J. Page et al. BIOINFORMATICS
- Competitive strategies differentiate closely related species of marine actinobacteria
- (2015) Nastassia V Patin et al. ISME Journal
- Minimum Information about a Biosynthetic Gene cluster
- (2015) Marnix H Medema et al. Nature Chemical Biology
- ClonalFrameML: Efficient Inference of Recombination in Whole Bacterial Genomes
- (2015) Xavier Didelot et al. PLoS Computational Biology
- Prokka: rapid prokaryotic genome annotation
- (2014) T. Seemann BIOINFORMATICS
- RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
- (2014) Alexandros Stamatakis BIOINFORMATICS
- Sioxanthin, a novel glycosylated carotenoid, reveals an unusual subclustered biosynthetic pathway
- (2014) Taylor K. S. Richter et al. ENVIRONMENTAL MICROBIOLOGY
- PopGenome: An Efficient Swiss Army Knife for Population Genomic Analyses in R
- (2014) Bastian Pfeifer et al. MOLECULAR BIOLOGY AND EVOLUTION
- Explaining microbial genomic diversity in light of evolutionary ecology
- (2014) Otto X. Cordero et al. NATURE REVIEWS MICROBIOLOGY
- A Systematic Computational Analysis of Biosynthetic Gene Cluster Evolution: Lessons for Engineering Biosynthesis
- (2014) Marnix H. Medema et al. PLoS Computational Biology
- Salinispora arenicola from temperate marine sediments: new intra-species variations and atypical distribution of secondary metabolic genes
- (2013) Kian-Sim Goo et al. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY
- Bioactivity-Guided Genome Mining Reveals the Lomaiviticin Biosynthetic Gene Cluster inSalinispora tropica
- (2013) Roland D. Kersten et al. CHEMBIOCHEM
- Horizontal gene transfer and the evolution of bacterial and archaeal population structure
- (2013) Martin F. Polz et al. TRENDS IN GENETICS
- Structural Basis of the Interaction of MbtH-like Proteins, Putative Regulators of Nonribosomal Peptide Biosynthesis, with Adenylating Enzymes
- (2012) Dominik A. Herbst et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Convergent Evolution in Plant Specialized Metabolism
- (2011) Eran Pichersky et al. Annual Review of Plant Biology
- Evolution of Secondary Metabolite Genes in Three Closely Related Marine Actinomycete Species
- (2011) Kelle C. Freel et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Discovery and Assembly-Line Biosynthesis of the Lymphostin Pyrroloquinoline Alkaloid Family of mTOR Inhibitors in Salinispora Bacteria
- (2011) Akimasa Miyanaga et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega
- (2011) F. Sievers et al. Molecular Systems Biology
- Mugsy: fast multiple alignment of closely related whole genomes
- (2010) Samuel V. Angiuoli et al. BIOINFORMATICS
- MZmine 2: Modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data
- (2010) Tomáš Pluskal et al. BMC BIOINFORMATICS
- The Discovery of Salinosporamide K from the Marine Bacterium “Salinispora pacifica” by Genome Mining Gives Insight into Pathway Evolution
- (2010) Alessandra S. Eustáquio et al. CHEMBIOCHEM
- Shared Biosynthesis of the Saliniketals and Rifamycins inSalinispora arenicolais Controlled by thesare1259-Encoded Cytochrome P450
- (2010) Micheal C. Wilson et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- Linking species concepts to natural product discovery in the post-genomic era
- (2009) Paul R. Jensen JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY
- Biosynthesis of the salinosporamide A polyketide synthase substrate chloroethylmalonyl-coenzyme A from S-adenosyl-L-methionine
- (2009) A. S. Eustaquio et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Unraveling the Biosynthesis of the Sporolide Cyclohexenone Building Block
- (2008) Ryan P. McGlinchey et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- The evolution of gene collectives: How natural selection drives chemical innovation
- (2008) M. A. Fischbach et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The use of secondary metabolite profiling in chemotaxonomy of filamentous fungi
- (2007) Jens C. Frisvad et al.
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreFind the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
Search