Variation in gut microbial contribution of essential amino acids to host protein metabolism in a wild small mammal community

Assessing the Potential of Amino Acid δ 13 C and δ 15 N Analysis in Terrestrial and Freshwater Ecosystems

(2022) Alexi C. Besser et al.   JOURNAL OF ECOLOGY

Nitrogen recycling via gut symbionts increases in ground squirrels over the hibernation season

(2022) Matthew D. Regan et al.   SCIENCE

Stable isotope fingerprinting traces essential amino acid assimilation and multichannel feeding in a vertebrate consumer

(2022) Philip J. Manlick et al.   Methods in Ecology and Evolution

Novel Insights into the Pig Gut Microbiome Using Metagenome-Assembled Genomes

(2022) Devin B. Holman et al.   Microbiology Spectrum

The coupling of green and brown food webs regulates trophic position in a montane mammal guild

(2022) Philip J. Manlick et al.   ECOLOGY

Dietary protein content and digestibility influences discrimination of amino acid nitrogen isotope values in a terrestrial omnivorous mammal

(2021) John P. Whiteman et al.   RAPID COMMUNICATIONS IN MASS SPECTROMETRY

Competition shapes individual foraging and survival in a desert rodent ensemble

(2021) Philip J. Manlick et al.   JOURNAL OF ANIMAL ECOLOGY

Meta‐analysis of primary producer amino acid δ 15 N values and their influence on trophic position estimation

(2021) Matthew D. Ramirez et al.   Methods in Ecology and Evolution

Isotopic and genetic methods reveal the role of the gut microbiome in mammalian host essential amino acid metabolism

(2020) Seth D. Newsome et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Amino acid δ 15 N underestimation of cetacean trophic positions highlights limited understanding of isotopic fractionation in higher marine consumers

(2020) Cory J. D. Matthews et al.   Ecology and Evolution

Fermentation Ability of Gut Microbiota of Wild Japanese Macaques in the Highland and Lowland Yakushima: In Vitro Fermentation Assay and Genetic Analyses

(2020) Goro Hanya et al.   MICROBIAL ECOLOGY

Roles of the gut microbiota in the adaptive evolution of mammalian species

(2020) Andrew H. Moeller et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Deciphering the impact of diet and host physiology on the mammalian gut microbiome by multi-omics approaches

(2020) Christian Milani et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Intraspecific variation and energy channel coupling within a Chilean kelp forest

(2020) Emma A. Elliott Smith et al.   ECOLOGY

Combining bulk and amino acid stable isotope analyses to quantify trophic level and basal resources of detritivores: a case study on earthworms

(2019) Anton M. Potapov et al.   OECOLOGIA

Foraging strategies of individual silky pocket mice over a boom–bust cycle in a stochastic dryland ecosystem

(2019) Jennifer D. Noble et al.   OECOLOGIA

Functional Characteristics of the Flying Squirrel's Cecal Microbiota under a Leaf-Based Diet, Based on Multiple Meta-Omic Profiling

(2018) Hsiao-Pei Lu et al.   Frontiers in Microbiology

Analyzing mixing systems using a new generation of Bayesian tracer mixing models

(2018) Brian C. Stock et al.   PeerJ

Amino acid isotope discrimination factors for a carnivore: physiological insights from leopard sharks and their diet

(2018) John P. Whiteman et al.   OECOLOGIA

Beyond Fermentation: Other Important Services Provided to Endothermic Herbivores by their Gut Microbiota

(2017) M. Denise Dearing et al.   INTEGRATIVE AND COMPARATIVE BIOLOGY

‘Trophic’ and ‘source’ amino acids in trophic estimation: a likely metabolic explanation

(2017) T. C. O’Connell   OECOLOGIA

Unpacking brown food-webs: Animal trophic identity reflects rampant microbivory

(2017) Shawn A. Steffan et al.   Ecology and Evolution

Effect of Dietary Oxalate on the Gut Microbiota of the Mammalian Herbivore Neotoma albigula

(2016) Aaron W. Miller et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

2016 Guidelines of the American Society of Mammalogists for the use of wild mammals in research and education:

(2016) Robert S. Sikes et al.   JOURNAL OF MAMMALOGY

Do Vertebrate Gut Metagenomes Confer Rapid Ecological Adaptation?

(2016) Antton Alberdi et al.   TRENDS IN ECOLOGY & EVOLUTION

Embracing variability in amino acid δ15N fractionation: mechanisms, implications, and applications for trophic ecology

(2016) Kelton W. McMahon et al.   Ecosphere

Essential Amino Acid Supplementation by Gut Microbes of a Wood-Feeding Cerambycid

(2015) Paul A. Ayayee et al.   ENVIRONMENTAL ENTOMOLOGY

What IsPeromyscus? Evidence from nuclear and mitochondrial DNA sequences suggests the need for a new classification

(2015) Roy N. Platt et al.   JOURNAL OF MAMMALOGY

A catalog of the mouse gut metagenome

(2015) Liang Xiao et al.   NATURE BIOTECHNOLOGY

Nutritional regulation of the anabolic fate of amino acids within the liver in mammals: concepts arising from in vivo studies

(2015) T. J. Wester et al.   NUTRITION RESEARCH REVIEWS

Microbes are trophic analogs of animals

(2015) Shawn A. Steffan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Variability in the routing of dietary proteins and lipids to consumer tissues influences tissue-specific isotopic discrimination

(2015) Nathan Wolf et al.   RAPID COMMUNICATIONS IN MASS SPECTROMETRY

Application of density gradient for the isolation of the fecal microbial stool component and the potential use thereof

(2015) Arancha Hevia et al.   Scientific Reports

Carbon and nitrogen isotope fractionation of amino acids in an avian marine predator, the gentoo penguin (Pygoscelis papua)

(2015) Kelton W. McMahon et al.   Ecology and Evolution

Can13C stable isotope analysis uncover essential amino acid provisioning by termite-associated gut microbes?

(2015) Paul A. Ayayee et al.   PeerJ

Small-intestinal or colonic microbiota as a potential amino acid source in animals

(2014) Werner G. Bergen   AMINO ACIDS

Biomass Utilization by Gut Microbiomes

(2014) Bryan A. White et al.   Annual Review of Microbiology

Gut microbes of mammalian herbivores facilitate intake of plant toxins

(2014) Kevin D. Kohl et al.   ECOLOGY LETTERS

The Gut Microbiota Appears to Compensate for Seasonal Diet Variation in the Wild Black Howler Monkey (Alouatta pigra)

(2014) Katherine R. Amato et al.   MICROBIAL ECOLOGY

The Gastrointestinal Tract of the White-Throated Woodrat (Neotoma albigula) Harbors Distinct Consortia of Oxalate-Degrading Bacteria

(2013) Aaron W. Miller et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Tracing the biosynthetic source of essential amino acids in marine turtles using δ13C fingerprints

(2013) Karen E. Arthur et al.   ECOLOGY

The role of short-chain fatty acids in the interplay between diet, gut microbiota, and host energy metabolism

(2013) Gijs den Besten et al.   JOURNAL OF LIPID RESEARCH

Tracing Carbon Sources through Aquatic and Terrestrial Food Webs Using Amino Acid Stable Isotope Fingerprinting

(2013) Thomas Larsen et al.   PLoS One

Plant Defense Against Herbivores: Chemical Aspects

(2012) Axel Mithöfer et al.   Annual Review of Plant Biology

A meta-analysis of the effects of detritus on primary producers and consumers in marine, freshwater, and terrestrial ecosystems

(2012) Elizabeth M. Hagen et al.   OIKOS

Tempo of trophic evolution and its impact on mammalian diversification

(2012) S. A. Price et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Functional Amino Acids in Growth, Reproduction, and Health

(2012) Guoyao Wu   Advances in Nutrition

Contributions of direct incorporation from diet and microbial amino acids to protein synthesis in Nile tilapia

(2011) Seth D. Newsome et al.   FUNCTIONAL ECOLOGY

Determination of aquatic food-web structure based on compound-specific nitrogen isotopic composition of amino acids

(2011) Yoshito Chikaraishi et al.   LIMNOLOGY AND OCEANOGRAPHY-METHODS

Diet Drives Convergence in Gut Microbiome Functions Across Mammalian Phylogeny and Within Humans

(2011) B. D. Muegge et al.   SCIENCE

Xylan degradation, a metabolic property shared by rumen and human colonic Bacteroidetes

(2010) Dylan Dodd et al.   MOLECULAR MICROBIOLOGY

A human gut microbial gene catalogue established by metagenomic sequencing

(2010) Junjie Qin et al.   NATURE

Amino acids: metabolism, functions, and nutrition

(2009) Guoyao Wu   AMINO ACIDS

Summer dietary nitrogen availability as a potential bottom-up constraint on moose in south-central Alaska

(2009) Scott H. McArt et al.   ECOLOGY

Stable isotope fingerprinting: a novel method for identifying plant, fungal, or bacterial origins of amino acids

(2009) Thomas Larsen et al.   ECOLOGY

Variation in discrimination factors (Δ15N and Δ13C): the effect of diet isotopic values and applications for diet reconstruction

(2009) Stéphane Caut et al.   JOURNAL OF APPLIED ECOLOGY

Rapid plant community responses during the summer monsoon to nighttime warming in a northern Chihuahuan Desert grassland

(2009) Scott L. Collins et al.   JOURNAL OF ARID ENVIRONMENTS

The Relationships of Major Lineages within Peromyscine Rodents: A Molecular Phylogenetic Hypothesis and Systematic Reappraisal

(2009) Jacqueline R. Miller et al.   JOURNAL OF MAMMALOGY

Carbon- and nitrogen-isotope tissue–diet discrimination and turnover rates in deer mice, Peromyscus maniculatus

(2008) J. F. Miller et al.   CANADIAN JOURNAL OF ZOOLOGY

Recovery and quantification of bacterial cells associated with streambed sediments

(2008) Stefano Amalfitano et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Evolution of Mammals and Their Gut Microbes

(2008) R. E. Ley et al.   SCIENCE