In Vitro Modulation of Rumen Fermentation by Microbiota from the Recombination of Rumen Fluid and Solid Phases

Integrated meta-omics reveals new ruminal microbial features associated with feed efficiency in dairy cattle

(2022) Ming-Yuan Xue et al.   Microbiome

Effect of substrate load on anaerobic fermentation of rice straw with rumen liquid as inoculum: Hydrolysis and acidogenesis efficiency, enzymatic activities and rumen bacterial community structure

(2021) Jinsong Liang et al.   WASTE MANAGEMENT

Solid diet manipulates rumen epithelial microbiota and its interactions with host transcriptomic in young ruminants

(2021) Jianmin Chai et al.   ENVIRONMENTAL MICROBIOLOGY

Pulse processing affects gas production by gut bacteria during in vitro fecal fermentation

(2021) Devin J. Rose et al.   FOOD RESEARCH INTERNATIONAL

Response of Growth Performance, Blood Biochemistry Indices, and Rumen Bacterial Diversity in Lambs to Diets Containing Supplemental Probiotics and Chinese Medicine Polysaccharides

(2021) Huan Chen et al.   Frontiers in Veterinary Science

Changes in the Solid-, Liquid-, and Epithelium-Associated Bacterial Communities in the Rumen of Hu Lambs in Response to Dietary Urea Supplementation

(2020) Zhipeng Li et al.   Frontiers in Microbiology

Longitudinal Investigation of the Gut Microbiota in Goat Kids from Birth to Postweaning

(2020) Yimin Zhuang et al.   Microorganisms

Dietary supplementation of sodium sulfate improves rumen fermentation, fiber digestibility and plasma metabolome through modulating rumen bacterial communities in steers

(2020) Yuchao Zhao et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Rumen Microbiome Composition Is Altered in Sheep Divergent in Feed Efficiency

(2020) Steven McLoughlin et al.   Frontiers in Microbiology

Integrating 16S rRNA Sequencing and LC–MS-Based Metabolomics to Evaluate the Effects of Live Yeast on Rumen Function in Beef Cattle

(2019) Ibukun Ogunade et al.   Animals

Saponin-Induced Shifts in the Rumen Microbiome and Metabolome of Young Cattle

(2019) Bing Wang et al.   Frontiers in Microbiology

Dynamic changes in rumen fermentation and bacterial community following rumen fluid transplantation in a sheep model of rumen acidosis: implications for rumen health in ruminants

(2019) Junhua Liu et al.   FASEB JOURNAL

Dynamic Alterations in Yak Rumen Bacteria Community and Metabolome Characteristics in Response to Feed Type

(2019) Chang Liu et al.   Frontiers in Microbiology

Ruminal microbiome-host crosstalk stimulates the development of the ruminal epithelium in a lamb model

(2019) Limei Lin et al.   Microbiome

Cecal Gut Microbiota and Metabolites Might Contribute to the Severity of Acute Myocardial Ischemia by Impacting the Intestinal Permeability, Oxidative Stress, and Energy Metabolism

(2019) Lili Sun et al.   Frontiers in Microbiology

Maternal versus artificial rearing shapes the rumen microbiome having minor long‐term physiological implications

(2019) Alejandro Belanche et al.   ENVIRONMENTAL MICROBIOLOGY

Bacterial communities in the solid, liquid, dorsal, and ventral epithelium fractions of yak ( Bos grunniens ) rumen

(2019) Qingmiao Ren et al.   MicrobiologyOpen

Persistence of Cellulolytic Bacteria Fibrobacter and Treponema After Short-Term Corn Stover-Based Dietary Intervention Reveals the Potential to Improve Rumen Fibrolytic Function

(2018) Xiao Xie et al.   Frontiers in Microbiology

The response of ruminal fermentation, epithelium-associated microbiota, and epithelial barrier function to severe feed restriction in pregnant ewes

(2018) Fan Hu et al.   JOURNAL OF ANIMAL SCIENCE

Improved Glucose and Lipid Metabolism in the Early Life of Female Offspring by Maternal Dietary Genistein Is Associated With Alterations in the Gut Microbiota

(2018) Liyuan Zhou et al.   Frontiers in Endocrinology

Evaluation of Microbial Communities Associated With the Liquid and Solid Phases of the Rumen of Cattle Offered a Diet of Perennial Ryegrass or White Clover

(2018) Jenna M. Bowen et al.   Frontiers in Microbiology

Apparent ruminal synthesis of B vitamins in lactating dairy cows fed diets with different forage-to-concentrate ratios

(2017) M. Seck et al.   JOURNAL OF DAIRY SCIENCE

Transient changes in milk production efficiency and bacterial community composition resulting from near-total exchange of ruminal contents between high- and low-efficiency Holstein cows

(2017) Paul J. Weimer et al.   JOURNAL OF DAIRY SCIENCE

Characteristics of rumen microorganisms involved in anaerobic degradation of cellulose at various pH values

(2017) Lu Zhang et al.   RSC Advances

A Metagenomics Investigation of Carbohydrate-Active Enzymes along the Gastrointestinal Tract of Saudi Sheep

(2017) Saad Al-Masaudi et al.   Frontiers in Microbiology

Comparison of rumen bacteria distribution in original rumen digesta, rumen liquid and solid fractions in lactating Holstein cows

(2017) Shoukun Ji et al.   Journal of Animal Science and Biotechnology

Development of Ruminal and Fecal Microbiomes Are Affected by Weaning But Not Weaning Strategy in Dairy Calves

(2016) Sarah J. Meale et al.   Frontiers in Microbiology

Rumen Bacterial Community Composition in Holstein and Jersey Cows Is Different under Same Dietary Condition and Is Not Affected by Sampling Method

(2016) Henry A. Paz et al.   Frontiers in Microbiology

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Rumen transfaunation

(2014) E.J. DePeters et al.   IMMUNOLOGY LETTERS

Veillonella seminalis sp. nov., a novel anaerobic Gram-stain-negative coccus from human clinical samples, and emended description of the genus Veillonella

(2014) F. Aujoulat et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Amylase addition increases starch ruminal digestion in first-lactation cows fed high and low starch diets

(2014) P. Nozière et al.   JOURNAL OF DAIRY SCIENCE

Comparative Analysis of Microbial Profiles in Cow Rumen Fed with Different Dietary Fiber by Tagged 16S rRNA Gene Pyrosequencing

(2013) Honglada Thoetkiattikul et al.   CURRENT MICROBIOLOGY

Commensal microbiome effects on mucosal immune system development in the ruminant gastrointestinal tract

(2012) Ryan Taschuk et al.   ANIMAL HEALTH RESEARCH REVIEWS

Ruminal digestibility and fermentation characteristics in vitro of fenugreek and alfalfa hay combination with or without the inoculation of Neocallimastix sp. YAK11

(2011) Y.C. Cao et al.   ANIMAL FEED SCIENCE AND TECHNOLOGY

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

Isolation of high-quality total RNA from rumen anaerobic bacteria and fungi, and subsequent detection of glycoside hydrolases

(2011) Pan Wang et al.   CANADIAN JOURNAL OF MICROBIOLOGY

Metagenomic biomarker discovery and explanation

(2011) Nicola Segata et al.   GENOME BIOLOGY

Comparative Genome Analysis of Prevotella ruminicola and Prevotella bryantii: Insights into Their Environmental Niche

(2010) Janaki Purushe et al.   MICROBIAL ECOLOGY

In vitroevaluation of the activity of microencapsulated carvacrol againstEscherichia coliwith K88 pili

(2009) Q. Wang et al.   JOURNAL OF APPLIED MICROBIOLOGY