Model-driven approach for the production of butyrate from CO2/H2 by a novel co-culture of C. autoethanogenum and C. beijerinckii

Autotrophic lactate production from H2 + CO2 using recombinant and fluorescent FAST-tagged Acetobacterium woodii strains

(2022) Alexander Mook et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Engineering Acetogenic Bacteria for Efficient One-Carbon Utilization

(2022) Hyeonsik Lee et al.   Frontiers in Microbiology

Genome-scale metabolic modelling enables deciphering ethanol metabolism via the acrylate pathway in the propionate-producer Anaerotignum neopropionicum

(2022) Sara Benito-Vaquerizo et al.   Microbial Cell Factories

Modeling Growth Kinetics, Interspecies Cell Fusion, and Metabolism of a Clostridium acetobutylicum/Clostridium ljungdahlii Syntrophic Coculture

(2021) Charles Foster et al.   mSystems

Propionate production from carbon monoxide by synthetic co-cultures of Acetobacterium wieringae spp. and propionigenic bacteria

(2021) João P. C. Moreira et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Sporulation in solventogenic and acetogenic clostridia

(2021) Mamou Diallo et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Valorization of C1 gases to value-added chemicals using acetogenic biocatalysts

(2021) Jiyun Bae et al.   CHEMICAL ENGINEERING JOURNAL

Production of microbial protein from fermented grass

(2021) Myrsini Sakarika et al.   CHEMICAL ENGINEERING JOURNAL

Potential utilization of dairy industries by-products and wastes through microbial processes: A critical review

(2021) Taner Sar et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Two-stage bioconversion of carbon monoxide to biopolymers via formate as an intermediate

(2020) Ho Won Hwang et al.   CHEMICAL ENGINEERING JOURNAL

Spoilage Lactic Acid Bacteria in the Brewing Industry

(2020) Zhenbo Xu et al.   JOURNAL OF MICROBIOLOGY AND BIOTECHNOLOGY

The Sporomusa type Nfn is a novel type of electron-bifurcating transhydrogenase that links the redox pools in acetogenic bacteria

(2020) Florian Kremp et al.   Scientific Reports

Transcriptomic and Phenotypic Analysis of a spoIIE Mutant in Clostridium beijerinckii

(2020) Mamou Diallo et al.   Frontiers in Microbiology

Advances and Applications of Clostridium Co-culture Systems in Biotechnology

(2020) Yuanfen Du et al.   Frontiers in Microbiology

Acidogenesis, solventogenesis, metabolic stress response and life cycle changes in Clostridium beijerinckii NRRL B-598 at the transcriptomic level

(2019) Petra Patakova et al.   Scientific Reports

Cell factories converting lactate and acetate to butyrate: Clostridium butyricum and microbial communities from dark fermentation bioreactors

(2019) Anna Detman et al.   Microbial Cell Factories

In silico identification of metabolic engineering strategies for improved lipid production in Yarrowia lipolytica by genome-scale metabolic modeling

(2019) Minsuk Kim et al.   Biotechnology for Biofuels

Metabolic shift induced by synthetic co-cultivation promotes high yield of chain elongated acids from syngas

(2019) Martijn Diender et al.   Scientific Reports

H2 drives metabolic rearrangements in gas-fermenting Clostridium autoethanogenum

(2018) Kaspar Valgepea et al.   Biotechnology for Biofuels

Direct cell-to-cell exchange of matter in a synthetic Clostridium syntrophy enables CO2 fixation, superior metabolite yields, and an expanded metabolic space

(2018) Kamil Charubin et al.   METABOLIC ENGINEERING

Arginine deiminase pathway provides ATP and boosts growth of the gas-fermenting acetogen Clostridium autoethanogenum

(2017) Kaspar Valgepea et al.   METABOLIC ENGINEERING

SteadyCom: Predicting microbial abundances while ensuring community stability

(2017) Siu Hung Joshua Chan et al.   PLoS Computational Biology

Production of medium-chain fatty acids and higher alcohols by a synthetic co-culture grown on carbon monoxide or syngas

(2016) Martijn Diender et al.   Biotechnology for Biofuels

Typical conversion of lignocellulosic biomass into reducing sugars using dilute acid hydrolysis and alkaline pretreatment

(2016) Yu-Loong Loow et al.   CELLULOSE

Relevance and analysis of butyric acid producing clostridia in milk and cheese

(2016) J. Brändle et al.   FOOD CONTROL

Low carbon fuels and commodity chemicals from waste gases – systematic approach to understand energy metabolism in a model acetogen

(2016) Esteban Marcellin et al.   GREEN CHEMISTRY

Production of butanol and isopropanol with an immobilized Clostridium

(2015) Ying Yang et al.   BIOPROCESS AND BIOSYSTEMS ENGINEERING

Bioenergetic constraints for conversion of syngas to biofuels in acetogenic bacteria

(2015) Johannes Bertsch et al.   Biotechnology for Biofuels

Production of an acetone-butanol-ethanol mixture from Clostridium acetobutylicum and its conversion to high-value biofuels

(2015) Sanil Sreekumar et al.   Nature Protocols

Integrated, systems metabolic picture of acetone-butanol-ethanol fermentation byClostridium acetobutylicum

(2015) Chen Liao et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Reconstruction of an Acetogenic 2,3-Butanediol Pathway Involving a Novel NADPH-Dependent Primary-Secondary Alcohol Dehydrogenase

(2014) Michael Köpke et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Capturing the response of Clostridium acetobutylicumto chemical stressors using a regulated genome-scale metabolic model

(2014) Satyakam Dash et al.   Biotechnology for Biofuels

The Bias Associated with Amplicon Sequencing Does Not Affect the Quantitative Assessment of Bacterial Community Dynamics

(2014) Federico M. Ibarbalz et al.   PLoS One

COBRApy: COnstraints-Based Reconstruction and Analysis for Python

(2013) Ali Ebrahim et al.   BMC Systems Biology

Community Flux Balance Analysis for Microbial Consortia at Balanced Growth

(2013) Ruchir A. Khandelwal et al.   PLoS One

Disruption of the acetate kinase (ack) gene of Clostridium acetobutylicum results in delayed acetate production

(2012) Wouter Kuit et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Biohydrogen production: Current perspectives and the way forward

(2012) K.Y. Show et al.   INTERNATIONAL JOURNAL OF HYDROGEN ENERGY

The Future of Butyric Acid in Industry

(2012) Mohammed Dwidar et al.   TheScientificWorldJOURNAL

Metabolic network reconstruction and genome-scale model of butanol-producing strain Clostridium beijerinckii NCIMB 8052

(2011) Caroline B Milne et al.   BMC Systems Biology

Clostridia: the importance of their exceptional substrate and metabolite diversity for biofuel and biorefinery applications

(2011) Bryan P Tracy et al.   CURRENT OPINION IN BIOTECHNOLOGY

Acetogenesis and the Wood–Ljungdahl pathway of CO2 fixation

(2008) Stephen W. Ragsdale et al.   BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS