SEVA 4.0: an update of the Standard European Vector Architecture database for advanced analysis and programming of bacterial phenotypes

Fast biofoundries: coping with the challenges of biomanufacturing

(2022) Jonathan Tellechea-Luzardo et al.   TRENDS IN BIOTECHNOLOGY

Versioning biological cells for trustworthy cell engineering

(2022) Jonathan Tellechea-Luzardo et al.   Nature Communications

Antibiotic-Efficient Genetic Cassette for the TEM-1 β-Lactamase That Improves Plasmid Performance

(2022) Alister J. Cumming et al.   ACS Synthetic Biology

PlasmidMaker is a versatile, automated, and high throughput end-to-end platform for plasmid construction

(2022) Behnam Enghiad et al.   Nature Communications

Generation of Synthetic Shuttle Vectors Enabling Modular Genetic Engineering of Cyanobacteria

(2022) Franz Opel et al.   ACS Synthetic Biology

Standardization of regulatory nodes for engineering heterologous gene expression: a feasibility study

(2022) Pablo I. Nikel et al.   Microbial Biotechnology

Unlocking the bacterial domain for industrial biotechnology applications using universal parts and tools

(2022) Lien De Wannemaeker et al.   BIOTECHNOLOGY ADVANCES

A Network Approach to Genetic Circuit Designs

(2022) Matthew Crowther et al.   ACS Synthetic Biology

Contextual dependencies expand the re-usability of genetic inverters

(2021) Huseyin Tas et al.   Nature Communications

Integrating Systems and Synthetic Biology to Understand and Engineer Microbiomes

(2021) Patrick A. Leggieri et al.   Annual Review of Biomedical Engineering

Refactoring the Conjugation Machinery of Promiscuous Plasmid RP4 into a Device for Conversion of Gram-Negative Isolates to Hfr Strains

(2021) Jillian Silbert et al.   ACS Synthetic Biology

A portable library of phosphate‐depletion based synthetic promoters for customable and automata control of gene expression in bacteria

(2021) Jesús Torres‐Bacete et al.   Microbial Biotechnology

A plasmid toolbox for controlled gene expression across the Proteobacteria

(2021) Layla A Schuster et al.   NUCLEIC ACIDS RESEARCH

A standardized genome architecture for bacterial synthetic biology (SEGA)

(2021) Carolyn N. Bayer et al.   Nature Communications

The ProUSER2.0 Toolbox: Genetic Parts and Highly Customizable Plasmids for Synthetic Biology in Bacillus subtilis

(2021) Kristoffer Bach Falkenberg et al.   ACS Synthetic Biology

Targetron-Assisted Delivery of Exogenous DNA Sequences into Pseudomonas putida through CRISPR-Aided Counterselection

(2021) Elena Velázquez et al.   ACS Synthetic Biology

Modeling Site-Specific Nucleotide Biases Affecting Himar1 Transposon Insertion Frequencies in TnSeq Data Sets

(2021) Sanjeevani Choudhery et al.   mSystems

SEVAtile: a standardised DNA assembly method optimised for Pseudomonas

(2021) Eveline‐Marie Lammens et al.   Microbial Biotechnology

Linking Engineered Cells to Their Digital Twins: A Version Control System for Strain Engineering

(2020) Jonathan Tellechea-Luzardo et al.   ACS Synthetic Biology

The long journey towards standards for engineering biosystems

(2020) Jacob Beal et al.   EMBO REPORTS

Multifunctional SEVA shuttle vectors for actinomycetes and Gram‐negative bacteria

(2020) Coral García‐Gutiérrez et al.   MicrobiologyOpen

SEVA 3.1: enabling interoperability of DNA assembly among the SEVA, BioBricks and Type IIS restriction enzyme standards

(2020) Stamatios G. Damalas et al.   Microbial Biotechnology

Are synthetic biology standards applicable in everyday research practice?

(2020) Huseyin Tas et al.   Microbial Biotechnology

A fluoride-responsive genetic circuit enables in vivo biofluorination in engineered Pseudomonas putida

(2020) Patricia Calero et al.   Nature Communications

A Standardized Inverter Package Borne by Broad Host Range Plasmids for Genetic Circuit Design in Gram-Negative Bacteria

(2020) Huseyin Tas et al.   ACS Synthetic Biology

A Bacterial Expression Vector Archive (BEVA) for Flexible Modular Assembly of Golden Gate-Compatible Vectors

(2019) Barney A. Geddes et al.   Frontiers in Microbiology

Physical decoupling of XylS/Pm regulatory elements and conditional proteolysis enable precise control of gene expression in Pseudomonas putida

(2019) Daniel C. Volke et al.   Microbial Biotechnology

Accelerated genome engineering of Pseudomonas putida by I-Sce I―mediated recombination and CRISPR-Cas9 counterselection

(2019) Nicolas T. Wirth et al.   Microbial Biotechnology

Synthetic Biology Tools for Novel Secondary Metabolite Discovery in Streptomyces

(2019) Namil Lee et al.   JOURNAL OF MICROBIOLOGY AND BIOTECHNOLOGY

Synthetic and minimalist vectors for Agrobacterium tumefaciens-mediated transformation of fungi

(2019) Luísa Czamanski Nora et al.   GENETICS AND MOLECULAR BIOLOGY

A standard for near-scarless plasmid construction using reusable DNA parts

(2019) Xiaoqiang Ma et al.   Nature Communications

Non‐invasive, ratiometric determination of intracellular pH in Pseudomonas species using a novel genetically encoded indicator

(2019) Alejandro Arce‐Rodríguez et al.   Microbial Biotechnology

Communicating Structure and Function in Synthetic Biology Diagrams

(2019) Jacob Beal et al.   ACS Synthetic Biology

A Modular Vector Toolkit with a Tailored Set of Thermosensors To Regulate Gene Expression in Thermus thermophilus

(2019) Carlos Verdú et al.   ACS Omega

SEVA 3.0: an update of the Standard European Vector Architecture for enabling portability of genetic constructs among diverse bacterial hosts

(2019) Esteban Martínez-García et al.   NUCLEIC ACIDS RESEARCH

SynBioHub: A Standards-Enabled Design Repository for Synthetic Biology

(2018) James Alastair McLaughlin et al.   ACS Synthetic Biology

Genetic programming of catalytic Pseudomonas putida biofilms for boosting biodegradation of haloalkanes

(2016) Ilaria Benedetti et al.   METABOLIC ENGINEERING

Genetic circuit design automation

(2016) A. A. K. Nielsen et al.   SCIENCE

SEVA Linkers: A Versatile and Automatable DNA Backbone Exchange Standard for Synthetic Biology

(2016) Se Hyeuk Kim et al.   ACS Synthetic Biology

An Integrated System for Precise Genome Modification in Escherichia coli

(2015) Huseyin Tas et al.   PLoS One

Development of New Modular Genetic Tools for Engineering the Halophilic Archaeon Halobacterium salinarum

(2015) Rafael Silva-Rocha et al.   PLoS One

Confidence, tolerance, and allowance in biological engineering: The nuts and bolts of living things

(2014) Manuel Porcar et al.   BIOESSAYS

Current development in genetic engineering strategies of Bacillus species

(2014) Huina Dong et al.   Microbial Cell Factories

SEVA 2.0: an update of the Standard European Vector Architecture for de-/re-construction of bacterial functionalities

(2014) Esteban Martínez-García et al.   NUCLEIC ACIDS RESEARCH

The Standard European Vector Architecture (SEVA): a coherent platform for the analysis and deployment of complex prokaryotic phenotypes

(2012) Rafael Silva-Rocha et al.   NUCLEIC ACIDS RESEARCH

Engineering multiple genomic deletions in Gram-negative bacteria: analysis of the multi-resistant antibiotic profile of Pseudomonas putida KT2440

(2011) Esteban Martínez-García et al.   ENVIRONMENTAL MICROBIOLOGY

Tn-seq: high-throughput parallel sequencing for fitness and genetic interaction studies in microorganisms

(2009) Tim van Opijnen et al.   NATURE METHODS

Shuttle expression plasmids for genetic studies in Streptococcus mutans

(2008) I. Biswas et al.   MICROBIOLOGY-SGM

MmeI: a minimal Type II restriction-modification system that only modifies one DNA strand for host protection

(2008) Richard D. Morgan et al.   NUCLEIC ACIDS RESEARCH

Engineering BioBrick vectors from BioBrick parts

(2008) Reshma P Shetty et al.   Journal of Biological Engineering