Deep generative modeling for volume reconstruction in cryo-electron microscopy

Artificial intelligence advances for de novo molecular structure modeling in cryo‐electron microscopy

(2021) Dong Si et al.   Wiley Interdisciplinary Reviews-Computational Molecular Science

Deep learning-based mixed-dimensional Gaussian mixture model for characterizing variability in cryo-EM

(2021) Muyuan Chen et al.   NATURE METHODS

Single-Particle Cryo-Electron Microscopy: Mathematical Theory, Computational Challenges, and Opportunities

(2020) Tamir Bendory et al.   IEEE SIGNAL PROCESSING MAGAZINE

Single-particle cryo-EM at atomic resolution

(2020) Takanori Nakane et al.   NATURE

RCSB Protein Data Bank: Architectural Advances Towards Integrated Searching and Efficient Access to Macromolecular Structure Data from the PDB Archive

(2020) Yana Rose et al.   JOURNAL OF MOLECULAR BIOLOGY

AlphaFold at CASP13

(2019) Mohammed AlQuraishi   BIOINFORMATICS

Variational selection of features for molecular kinetics

(2019) Martin K. Scherer et al.   JOURNAL OF CHEMICAL PHYSICS

Cryo-EM, XFELs and the structure conundrum in structural biology

(2019) Abbas Ourmazd   NATURE METHODS

Structure and Conformational Dynamics of the Human Spliceosomal B act Complex

(2018) David Haselbach et al.   CELL

Cryo-EM in drug discovery: achievements, limitations and prospects

(2018) Jean-Paul Renaud et al.   NATURE REVIEWS DRUG DISCOVERY

cryoSPARC: algorithms for rapid unsupervised cryo-EM structure determination

(2017) Ali Punjani et al.   NATURE METHODS

Covariance Matrix Estimation for the Cryo-EM Heterogeneity Problem

(2015) E. Katsevich et al.   SIAM Journal on Imaging Sciences

Image formation modeling in cryo-electron microscopy

(2013) Miloš Vulović et al.   JOURNAL OF STRUCTURAL BIOLOGY

Avoiding the pitfalls of single particle cryo-electron microscopy: Einstein from noise

(2013) R. Henderson   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

RELION: Implementation of a Bayesian approach to cryo-EM structure determination

(2012) Sjors H.W. Scheres   JOURNAL OF STRUCTURAL BIOLOGY

A Bayesian View on Cryo-EM Structure Determination

(2011) Sjors H.W. Scheres   JOURNAL OF MOLECULAR BIOLOGY