RCSB Protein Data Bank: Architectural Advances Towards Integrated Searching and Efficient Access to Macromolecular Structure Data from the PDB Archive
Published 2020 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
RCSB Protein Data Bank: Architectural Advances Towards Integrated Searching and Efficient Access to Macromolecular Structure Data from the PDB Archive
Authors
Keywords
structural biology, databases, computer architecture, FAIR principles
Journal
JOURNAL OF MOLECULAR BIOLOGY
Volume 433, Issue 11, Pages 166704
Publisher
Elsevier BV
Online
2020-11-11
DOI
10.1016/j.jmb.2020.11.003
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Structure of Mpro from SARS-CoV-2 and discovery of its inhibitors
- (2020) Zhenming Jin et al. NATURE
- 3C-like protease inhibitors block coronavirus replication in vitro and improve survival in MERS-CoV-infected mice
- (2020) Athri D. Rathnayake et al. Science Translational Medicine
- Real time structural search of the Protein Data Bank
- (2020) Dmytro Guzenko et al. PLoS Computational Biology
- BinaryCIF and CIFTools—Lightweight, efficient and extensible macromolecular data management
- (2020) David Sehnal et al. PLoS Computational Biology
- Announcing mandatory submission of PDBx/mmCIF format files for crystallographic depositions to the Protein Data Bank (PDB)
- (2019) Paul D. Adams et al. Acta Crystallographica Section D-Structural Biology
- RCSB Protein Data Bank: Enabling biomedical research and drug discovery
- (2019) David S. Goodsell et al. PROTEIN SCIENCE
- Clustering huge protein sequence sets in linear time
- (2018) Martin Steinegger et al. Nature Communications
- Worldwide Protein Data Bank biocuration supporting open access to high-quality 3D structural biology data
- (2018) Jasmine Y Young et al. Database-The Journal of Biological Databases and Curation
- Protein Data Bank: the single global archive for 3D macromolecular structure data
- (2018) et al. NUCLEIC ACIDS RESEARCH
- RCSB Protein Data Bank: biological macromolecular structures enabling research and education in fundamental biology, biomedicine, biotechnology and energy
- (2018) Stephen K Burley et al. NUCLEIC ACIDS RESEARCH
- MMseqs2 enables sensitive protein sequence searching for the analysis of massive data sets
- (2017) Martin Steinegger et al. NATURE BIOTECHNOLOGY
- RCSB Protein Data Bank: Sustaining a living digital data resource that enables breakthroughs in scientific research and biomedical education
- (2017) Stephen K. Burley et al. PROTEIN SCIENCE
- OneDep: Unified wwPDB System for Deposition, Biocuration, and Validation of Macromolecular Structures in the PDB Archive
- (2017) Jasmine Y. Young et al. STRUCTURE
- Validation of Structures in the Protein Data Bank
- (2017) Swanand Gore et al. STRUCTURE
- Protein Data Bank Japan (PDBj): updated user interfaces, resource description framework, analysis tools for large structures
- (2016) Akira R. Kinjo et al. NUCLEIC ACIDS RESEARCH
- The FAIR Guiding Principles for scientific data management and stewardship
- (2016) Mark D. Wilkinson et al. Scientific Data
- The chemical component dictionary: complete descriptions of constituent molecules in experimentally determined 3D macromolecules in the Protein Data Bank
- (2014) John D. Westbrook et al. BIOINFORMATICS
- Improving the representation of peptide-like inhibitor and antibiotic molecules in the Protein Data Bank
- (2013) Shuchismita Dutta et al. BIOPOLYMERS
- InChI - the worldwide chemical structure identifier standard
- (2013) Stephen Heller et al. Journal of Cheminformatics
- The future of the protein data bank
- (2012) Helen M. Berman et al. BIOPOLYMERS
- New and continuing developments at PROSITE
- (2012) Christian J. A. Sigrist et al. NUCLEIC ACIDS RESEARCH
- PDBe: Protein Data Bank in Europe
- (2009) S. Velankar et al. NUCLEIC ACIDS RESEARCH
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started