Reverse engineering approach: a step towards a new era of vaccinology with special reference to Salmonella
Published 2022 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Reverse engineering approach: a step towards a new era of vaccinology with special reference to Salmonella
Authors
Keywords
-
Journal
Expert Review of Vaccines
Volume 21, Issue 12, Pages 1763-1785
Publisher
Informa UK Limited
Online
2022-11-21
DOI
10.1080/14760584.2022.2148661
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- SARS-CoV-2–Specific Vaccine Candidates; the Contribution of Structural Vaccinology
- (2022) Su Min Pack et al. Vaccines
- Toward rational vaccine engineering
- (2022) Yashavantha L. Vishweshwaraiah et al. ADVANCED DRUG DELIVERY REVIEWS
- Designing a multi-epitope vaccine against Chlamydia pneumoniae by integrating the core proteomics, subtractive proteomics and reverse vaccinology-based immunoinformatics approaches
- (2022) Fatima Noor et al. COMPUTERS IN BIOLOGY AND MEDICINE
- An integrated in silico based subtractive genomics and reverse vaccinology approach for the identification of novel vaccine candidate and chimeric vaccine against XDR Salmonella typhi H58
- (2022) Kanwal Khan et al. GENOMICS
- Contribution of typhoid toxin in the pathogenesis of Salmonella Typhi
- (2022) Reena Thakur et al. MICROBIAL PATHOGENESIS
- Identification of Putative Vaccine and Drug Targets against the Methicillin-Resistant Staphylococcus aureus by Reverse Vaccinology and Subtractive Genomics Approaches
- (2022) Romen Singh Naorem et al. MOLECULES
- Bi-directional elucidation of Lactiplantibacillus plantarum (RTA 8) intervention on the pathophysiology of gut-brain axis during Salmonella brain infection
- (2022) Amrita Kaur et al. Gut Pathogens
- Application of Bacteriophages for Human Health: An Old Approach against Contemporary “Bad Bugs”
- (2022) Lucia Henrici De Angelis et al. Microorganisms
- Peptides as Diagnostic, Therapeutic, and Theranostic Tools: Progress and Future Challenges
- (2022) Reena Thakur et al. CRITICAL REVIEWS IN THERAPEUTIC DRUG CARRIER SYSTEMS
- Pangenome analysis and reverse vaccinology of XDR Salmonella typhi strain from Pakistan identified novel vaccine targets
- (2021) A. Amir et al. INTERNATIONAL JOURNAL OF INFECTIOUS DISEASES
- Cocktail of carbohydrases from Aspergillus niger: an economical and eco-friendly option for biofilm clearance from biopolymer surfaces
- (2021) Arashdeep Kaur et al. AMB Express
- Potential of 1-(1-napthylmethyl)-piperazine, an efflux pump inhibitor against cadmium-induced multidrug resistance in Salmonella enterica serovar Typhi as an adjunct to antibiotics
- (2021) Ujjwal Jit Kaur et al. BRAZILIAN JOURNAL OF MICROBIOLOGY
- Reverse vaccinology approach for the identifications of potential vaccine candidates against Salmonella
- (2021) Jie Li et al. INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY
- Vaxign2: the second generation of the first Web-based vaccine design program using reverse vaccinology and machine learning
- (2021) Edison Ong et al. NUCLEIC ACIDS RESEARCH
- Genome-wide screening of vaccine targets prioritization and reverse vaccinology aided design of peptides vaccine to enforce humoral immune response against Campylobacter jejuni
- (2021) Adnan Zeb et al. COMPUTERS IN BIOLOGY AND MEDICINE
- Immunoinformatic approach employing modeling and simulation to design a novel vaccine construct targeting MDR efflux pumps to confer wide protection against typhoidal Salmonella serovars
- (2021) Soumya Ranjan Mahapatra et al. JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS
- Multi-epitope DnaK peptide vaccine accords protection against lethal S. typhimurium challenge: Elicits both cell mediated immunity and long-lasting serum-neutralizing antibody titers
- (2021) Shivani Verma et al. PHARMACOLOGICAL RESEARCH
- Combining pangenome analysis to identify potential cross-protective antigens against avian pathogenic Escherichia coli
- (2021) Zhuohao Wang et al. AVIAN PATHOLOGY
- Built-in adjuvants for use in vaccines
- (2021) Qianqian Li et al. EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY
- Prioritization of potential vaccine candidates and designing a multiepitope-based subunit vaccine against multidrug-resistant Salmonella Typhi str. CT18: A subtractive proteomics and immunoinformatics approach
- (2021) Yamini Chand et al. MICROBIAL PATHOGENESIS
- Reverse and structural vaccinology approach to design a highly immunogenic multi-epitope subunit vaccine against Streptococcus pneumoniae infection
- (2020) Lohany Dias Mamede et al. INFECTION GENETICS AND EVOLUTION
- Salmonella Strain Specificity Determines Post-typhoid Central Nervous System Complications: Intervention by Lactiplantibacillus plantarum at Gut-Brain Axis
- (2020) Amrita Kaur et al. Frontiers in Microbiology
- Identification of novel vaccine candidate against Salmonella enterica serovar Typhi by reverse vaccinology method and evaluation of its immunization
- (2020) Ehsan Esmailnia et al. GENOMICS
- DualSeqDB: the host–pathogen dual RNA sequencing database for infection processes
- (2020) Javier Macho Rendón et al. NUCLEIC ACIDS RESEARCH
- Quorum sensing: a new prospect for the management of antimicrobial-resistant infectious diseases
- (2020) Mainul Haque et al. Expert Review of Anti-Infective Therapy
- Application of built-in adjuvants for epitope-based vaccines
- (2019) Yao Lei et al. PeerJ
- Emergence of Extensively Drug-Resistant Salmonella Typhi Infections Among Travelers to or from Pakistan — United States, 2016–2018
- (2019) Kevin Chatham-Stephens et al. MMWR-MORBIDITY AND MORTALITY WEEKLY REPORT
- Salmonella Typhi, Paratyphi A, Enteritidis and Typhimurium core proteomes reveal differentially expressed proteins linked to the cell surface and pathogenicity
- (2019) Sara Saleh et al. PLoS Neglected Tropical Diseases
- Structural Vaccinology for Viral Vaccine Design
- (2019) Mohd Ishtiaq Anasir et al. Frontiers in Microbiology
- The Development of a Vaccine Against Meningococcus B Using Reverse Vaccinology
- (2019) Vega Masignani et al. Frontiers in Immunology
- Immunoinformatics: In Silico Approaches and Computational Design of a Multi-epitope, Immunogenic Protein
- (2019) Armina Alagheband Bahrami et al. INTERNATIONAL REVIEWS OF IMMUNOLOGY
- Heat shock proteins in infection
- (2019) Azam Bolhassani et al. CLINICA CHIMICA ACTA
- Computational Design of Different Epitope-Based Vaccines Against Salmonella typhi
- (2019) Nemat Shams et al. International Journal of Peptide Research and Therapeutics
- Prophylactic potential of cytolethal distending toxin B (CdtB) subunit of typhoid toxin against Typhoid fever
- (2019) Reena Thakur et al. Scientific Reports
- Antimicrobial Resistance: Implications and Costs
- (2019) Porooshat Dadgostar Infection and Drug Resistance
- Current status of pan-genome analysis for pathogenic bacteria
- (2019) Yeji Kim et al. CURRENT OPINION IN BIOTECHNOLOGY
- Nervous system control of intestinal host defense in C. elegans
- (2019) Khursheed A Wani et al. CURRENT OPINION IN NEUROBIOLOGY
- Inhibition of RM-1 prostate carcinoma and eliciting robust immune responses in the mouse model by using VEGF-M2-GnRH3-hinge-MVP vaccine
- (2018) Yiqin Wang et al. GENES AND IMMUNITY
- Discovery, research, and development of new antibiotics: the WHO priority list of antibiotic-resistant bacteria and tuberculosis
- (2018) Evelina Tacconelli et al. LANCET INFECTIOUS DISEASES
- Multi-epitope DnaK peptide vaccine against S.Typhi: An in silico approach
- (2018) Shivani Verma et al. VACCINE
- Emergence of an Extensively Drug-Resistant Salmonella enterica Serovar Typhi Clone Harboring a Promiscuous Plasmid Encoding Resistance to Fluoroquinolones and Third-Generation Cephalosporins
- (2018) Elizabeth J. Klemm et al. mBio
- Changing Priorities in Vaccinology: Antibiotic Resistance Moving to the Top
- (2018) Aldo Tagliabue et al. Frontiers in Immunology
- Tinker 8: Software Tools for Molecular Design
- (2018) Joshua A. Rackers et al. Journal of Chemical Theory and Computation
- Peptides as adjuvants for ampicillin and oxacillin against methicillin-resistant Staphylococcus aureus (MRSA)
- (2018) Praveen Rishi et al. MICROBIAL PATHOGENESIS
- Development of a novel S. Typhi and Paratyphi A outer membrane vesicles based bivalent vaccine against enteric fever
- (2018) Debaki R. Howlader et al. PLoS One
- Evidence to Action: The 10th International Conference on Typhoid and Other Invasive Salmonelloses
- (2018) Sarah Lindsay et al. CLINICAL INFECTIOUS DISEASES
- Efficacy and immunogenicity of a Vi-tetanus toxoid conjugate vaccine in the prevention of typhoid fever using a controlled human infection model of Salmonella Typhi: a randomised controlled, phase 2b trial
- (2017) Celina Jin et al. LANCET
- Encapsulation of an EP67-Conjugated CTL Peptide Vaccine in Nanoscale Biodegradable Particles Increases the Efficacy of Respiratory Immunization and Affects the Magnitude and Memory Subsets of Vaccine-Generated Mucosal and Systemic CD8+ T Cells in a Diameter-Dependent Manner
- (2017) Bala V. K. Karuturi et al. MOLECULAR PHARMACEUTICS
- BepiPred-2.0: improving sequence-based B-cell epitope prediction using conformational epitopes
- (2017) Martin Closter Jespersen et al. NUCLEIC ACIDS RESEARCH
- High-resolution global peptide-protein docking using fragments-based PIPER-FlexPepDock
- (2017) Nawsad Alam et al. PLoS Computational Biology
- The burden of typhoid fever in low- and middle-income countries: A meta-regression approach
- (2017) Marina Antillón et al. PLoS Neglected Tropical Diseases
- Monitoring of dynamic changes in Keyhole Limpet Hemocyanin (KLH)-specific B cells in KLH-vaccinated cancer patients
- (2017) Florian Wimmers et al. Scientific Reports
- Pangenome and immuno-proteomics analysis of Acinetobacter baumannii strains revealed the core peptide vaccine targets
- (2016) Afreenish Hassan et al. BMC GENOMICS
- CHARMM-GUI 10 years for biomolecular modeling and simulation
- (2016) Sunhwan Jo et al. JOURNAL OF COMPUTATIONAL CHEMISTRY
- Reverse vaccinology 2.0: Human immunology instructs vaccine antigen design
- (2016) Rino Rappuoli et al. JOURNAL OF EXPERIMENTAL MEDICINE
- PEP-FOLD3: fasterde novostructure prediction for linear peptides in solution and in complex
- (2016) Alexis Lamiable et al. NUCLEIC ACIDS RESEARCH
- PepComposer: computational design of peptides binding to a given protein surface
- (2016) Agnieszka Obarska-Kosinska et al. NUCLEIC ACIDS RESEARCH
- What proportion of Salmonella Typhi cases are detected by blood culture? A systematic literature review
- (2016) Vittal Mogasale et al. Annals of Clinical Microbiology and Antimicrobials
- The Burden of Typhoid and Paratyphoid in India: Systematic Review and Meta-analysis
- (2016) Jacob John et al. PLoS Neglected Tropical Diseases
- Production of a novel multi-epitope peptide vaccine for cancer immunotherapy in TC-1 tumor-bearing mice
- (2015) Navid Nezafat et al. BIOLOGICALS
- Evaluation of sensitivity and specificity of ELISA against Widal test for typhoid diagnosis in endemic population of Kathmandu
- (2015) Anurag Adhikari et al. BMC INFECTIOUS DISEASES
- GalaxyPepDock: a protein–peptide docking tool based on interaction similarity and energy optimization
- (2015) Hasup Lee et al. NUCLEIC ACIDS RESEARCH
- CABS-dock web server for the flexible docking of peptides to proteins without prior knowledge of the binding site
- (2015) Mateusz Kurcinski et al. NUCLEIC ACIDS RESEARCH
- Harnessing Computational Biology for Exact Linear B-Cell Epitope Prediction: A Novel Amino Acid Composition-Based Feature Descriptor
- (2015) Vijayakumar Saravanan et al. OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY
- The human gut resistome
- (2015) W. van Schaik PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Fully Blind Peptide-Protein Docking with pepATTRACT
- (2015) Christina E.M. Schindler et al. STRUCTURE
- Rapid Emergence of Multidrug Resistant, H58-Lineage Salmonella Typhi in Blantyre, Malawi
- (2015) Nicholas A. Feasey et al. PLoS Neglected Tropical Diseases
- Identification of Potential Vaccine Candidates Against Streptococcus pneumoniae by Reverse Vaccinology Approach
- (2014) Sandipan Talukdar et al. APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY
- ZDOCK server: interactive docking prediction of protein-protein complexes and symmetric multimers
- (2014) B. G. Pierce et al. BIOINFORMATICS
- Keyhole limpet haemocyanin - a model antigen for human immunotoxicological studies
- (2014) Ashwin Swaminathan et al. BRITISH JOURNAL OF CLINICAL PHARMACOLOGY
- Mucosal Immunization: A Review of Strategies and Challenges
- (2014) Hinal Patel et al. CRITICAL REVIEWS IN THERAPEUTIC DRUG CARRIER SYSTEMS
- 25 Years after Vi Typhoid Vaccine Efficacy Study, Typhoid Affects Significant Number of Population in Nepal
- (2014) Deepak Bajracharya et al. PLoS One
- CELLO2GO: A Web Server for Protein subCELlular LOcalization Prediction with Functional Gene Ontology Annotation
- (2014) Chin-Sheng Yu et al. PLoS One
- Antibodies and Protection Against Invasive Salmonella Disease
- (2014) Calman A. MacLennan Frontiers in Immunology
- Jenner-predict server: prediction of protein vaccine candidates (PVCs) in bacteria based on host-pathogen interactions
- (2013) Varun Jaiswal et al. BMC BIOINFORMATICS
- Identification ofIn Vivo-Induced Bacterial Proteins during Human Infection with Salmonella enterica Serotype Paratyphi A
- (2013) Mohammad Murshid Alam et al. Clinical and Vaccine Immunology
- Elevation of serum procalcitonin in patients after chemical pleurodesis with intrapleural injection of OK-432
- (2013) Bing-ling Xu et al. Clinical Respiratory Journal
- Increasing rates ofSalmonellaParatyphi A and the current status of its vaccine development
- (2013) Sushant Sahastrabuddhe et al. Expert Review of Vaccines
- Helicobacter pylori FliD protein is a highly sensitive and specific marker for serologic diagnosis of H. pylori infection
- (2013) Mohammad Khalifeh Gholi et al. INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY
- Structure and function of the Salmonella Typhi chimaeric A2B5 typhoid toxin
- (2013) Jeongmin Song et al. NATURE
- A Unified Conformational Selection and Induced Fit Approach to Protein-Peptide Docking
- (2013) Mikael Trellet et al. PLoS One
- Improved Method for Linear B-Cell Epitope Prediction Using Antigen’s Primary Sequence
- (2013) Harinder Singh et al. PLoS One
- Fusion protein linkers: Property, design and functionality
- (2012) Xiaoying Chen et al. ADVANCED DRUG DELIVERY REVIEWS
- Pharmacokinetics of recombinant bifunctional fusion proteins
- (2012) Xiaoying Chen et al. Expert Opinion on Drug Metabolism & Toxicology
- MovingHelicobacter pylorivaccine development forward with bioinformatics and immunomics
- (2012) Leonard Moise et al. Expert Review of Vaccines
- Edwardsiella tarda flagellar protein FlgD: A protective immunogen against edwardsiellosis
- (2012) Meng Zhang et al. VACCINE
- Vaccination with recombinant flagellar proteins FlgJ and FliN induce protection against Brucella abortus 544 infection in BALB/c mice
- (2012) Xianbo Li et al. VETERINARY MICROBIOLOGY
- Reliable B Cell Epitope Predictions: Impacts of Method Development and Improved Benchmarking
- (2012) Jens Vindahl Kringelum et al. PLoS Computational Biology
- Vaccines: From Empirical Development to Rational Design
- (2012) Christine Rueckert et al. PLoS Pathogens
- PepCrawler: a fast RRT-based algorithm for high-resolution refinement and binding affinity estimation of peptide inhibitors
- (2011) E. Donsky et al. BIOINFORMATICS
- Early clinical experience with a candidate meningococcal B recombinant vaccine (rMenB) in healthy adults
- (2011) Daniela Toneatto et al. Human vaccines & immunotherapeutics
- The Salmonella enterica Pan-genome
- (2011) Annika Jacobsen et al. MICROBIAL ECOLOGY
- Rosetta FlexPepDock web server—high resolution modeling of peptide–protein interactions
- (2011) Nir London et al. NUCLEIC ACIDS RESEARCH
- An adhesion protein of Salmonella enterica serovar Typhi is required for pathogenesis and potential target for vaccine development
- (2011) S. Ghosh et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Recombinant heat shock protein 65 carrying PADRE and HBV epitopes activates dendritic cells and elicits HBV-specific CTL responses
- (2011) Hua Wang et al. VACCINE
- In Vivo Expression of Salmonella enterica Serotype Typhi Genes in the Blood of Patients with Typhoid Fever in Bangladesh
- (2011) Alaullah Sheikh et al. PLoS Neglected Tropical Diseases
- High-throughput prediction of protein antigenicity using protein microarray data
- (2010) Christophe N. Magnan et al. BIOINFORMATICS
- PSORTb 3.0: improved protein subcellular localization prediction with refined localization subcategories and predictive capabilities for all prokaryotes
- (2010) Nancy Y. Yu et al. BIOINFORMATICS
- The Global Burden of NontyphoidalSalmonellaGastroenteritis
- (2010) Shannon E. Majowicz et al. CLINICAL INFECTIOUS DISEASES
- It takes nerves to fight infections: insights on neuro-immune interactions from C. elegans
- (2010) T. Kawli et al. Disease Models & Mechanisms
- Progress and novel strategies in vaccine development and treatment of anthrax
- (2010) Theodor Chitlaru et al. IMMUNOLOGICAL REVIEWS
- Gneg-mPLoc: A top-down strategy to enhance the quality of predicting subcellular localization of Gram-negative bacterial proteins
- (2010) Hong-Bin Shen et al. JOURNAL OF THEORETICAL BIOLOGY
- The use of genomics in microbial vaccine development
- (2009) Stefania Bambini et al. DRUG DISCOVERY TODAY
- ACEMD: Accelerating Biomolecular Dynamics in the Microsecond Time Scale
- (2009) M. J. Harvey et al. Journal of Chemical Theory and Computation
- Temporal Trends of Invasive Streptococcus pneumoniae Serotypes and Antimicrobial Resistance Patterns in Spain from 1979 to 2007
- (2009) A. Fenoll et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Linear IgE-epitope mapping and comparative structural homology modeling of hazelnut and English walnut 11S globulins
- (2009) Jason M. Robotham et al. MOLECULAR IMMUNOLOGY
- A Cluster-Randomized Effectiveness Trial of Vi Typhoid Vaccine in India
- (2009) Dipika Sur et al. NEW ENGLAND JOURNAL OF MEDICINE
- PEPITO: improved discontinuous B-cell epitope prediction using multiple distance thresholds and half sphere exposure
- (2008) Michael J. Sweredoski et al. BIOINFORMATICS
- ElliPro: a new structure-based tool for the prediction of antibody epitopes
- (2008) Julia Ponomarenko et al. BMC BIOINFORMATICS
- Antimicrobial resistance in typhoidal and nontyphoidal salmonellae
- (2008) Christopher M Parry et al. CURRENT OPINION IN INFECTIOUS DISEASES
- Immune epitope database analysis resource (IEDB-AR)
- (2008) Q. Zhang et al. NUCLEIC ACIDS RESEARCH
- PVS: a web server for protein sequence variability analysis tuned to facilitate conserved epitope discovery
- (2008) M. Garcia-Boronat et al. NUCLEIC ACIDS RESEARCH
- Application of In Vivo Induced Antigen Technology (IVIAT) to Bacillus anthracis
- (2008) Sean M. Rollins et al. PLoS One
- COBEpro: a novel system for predicting continuous B-cell epitopes
- (2008) Michael J. Sweredoski et al. PROTEIN ENGINEERING DESIGN & SELECTION
- Immune recognition of botulinum neurotoxin B: Antibody-binding regions on the heavy chain of the toxin
- (2007) Behzod Z. Dolimbek et al. MOLECULAR IMMUNOLOGY
- Identification of Salmonella typhi genes expressed within macrophages by selective capture of transcribed sequences (SCOTS)
- (2003) France Daigle et al. MOLECULAR MICROBIOLOGY
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now