Pan-mitogenomics reveals the genetic basis of cytonuclear conflicts in citrus hybridization, domestication, and diversification
Published 2022 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Pan-mitogenomics reveals the genetic basis of cytonuclear conflicts in citrus hybridization, domestication, and diversification
Authors
Keywords
-
Journal
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Volume 119, Issue 43, Pages -
Publisher
Proceedings of the National Academy of Sciences
Online
2022-10-20
DOI
10.1073/pnas.2206076119
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Structural variation and parallel evolution of apomixis in citrus during domestication and diversification
- (2022) Nan Wang et al. National Science Review
- Regulation of nucellar embryony, a mode of sporophytic apomixis in Citrus resembling somatic embryogenesis
- (2021) Yuantao Xu et al. CURRENT OPINION IN PLANT BIOLOGY
- Genome of a citrus rootstock and global DNA demethylation caused by heterografting
- (2021) Yue Huang et al. Horticulture Research
- Diversification of mandarin citrus by hybrid speciation and apomixis
- (2021) Guohong Albert Wu et al. Nature Communications
- The Tempo and Mode of Angiosperm Mitochondrial Genome Divergence Inferred from Intraspecific Variation in Arabidopsis thaliana
- (2020) Zhiqiang Wu et al. G3-Genes Genomes Genetics
- Mitochondrial genome editing gets precise
- (2020) Magomet Aushev et al. NATURE
- Comparative analysis of the transcriptome, methylome, and metabolome during pollen abortion of a seedless citrus mutant
- (2020) Li-Xia Ye et al. PLANT MOLECULAR BIOLOGY
- Callose Deposition during Pollen Development
- (2020) Madeleine Seale PLANT PHYSIOLOGY
- Assembly of Satsuma mandarin mitochondrial genome and identification of cytoplasmic male sterility–specific ORFs in a somatic cybrid of pummelo
- (2020) Shuai Zhang et al. Tree Genetics & Genomes
- RDP5: A computer program for analysing recombination in, and removing signals of recombination from, nucleotide sequence datasets
- (2020) Darren P Martin et al. Virus Evolution
- Genome sequencing and CRISPR /Cas9 gene editing of an early flowering Mini‐Citrus ( Fortunella hindsii )
- (2019) Chenqiao Zhu et al. PLANT BIOTECHNOLOGY JOURNAL
- Genome of Wild Mandarin and Domestication History of Mandarin
- (2018) Lun Wang et al. Molecular Plant
- Genomics of the origin and evolution of Citrus
- (2018) Guohong Albert Wu et al. NATURE
- QTL mapping of male sterility and transmission pattern in progeny of Satsuma mandarin
- (2018) Shingo Goto et al. PLoS One
- Seedless mutant ‘Wuzi Ougan’ (Citrus suavissima Hort. ex Tanaka ‘seedless’) and the wild type were compared by iTRAQ-based quantitative proteomics and integratedly analyzed with transcriptome to improve understanding of male sterility
- (2018) Chi Zhang et al. BMC GENETICS
- Genomic analyses of primitive, wild and cultivated citrus provide insights into asexual reproduction
- (2017) Xia Wang et al. NATURE GENETICS
- ModelFinder: fast model selection for accurate phylogenetic estimates
- (2017) Subha Kalyaanamoorthy et al. NATURE METHODS
- Evolutionary genomics of grape (Vitis viniferassp.vinifera) domestication
- (2017) Yongfeng Zhou et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Importance of incomplete lineage sorting and introgression in the origin of shared genetic variation between two closely related pines with overlapping distributions
- (2016) Y Zhou et al. HEREDITY
- Robust and scalable inference of population history from hundreds of unphased whole genomes
- (2016) Jonathan Terhorst et al. NATURE GENETICS
- Phased diploid genome assembly with single-molecule real-time sequencing
- (2016) Chen-Shan Chin et al. NATURE METHODS
- Genomics and the Contrasting Dynamics of Annual and Perennial Domestication
- (2015) Brandon S. Gaut et al. TRENDS IN GENETICS
- Evaluating the Use of ABBA–BABA Statistics to Locate Introgressed Loci
- (2014) Simon H. Martin et al. MOLECULAR BIOLOGY AND EVOLUTION
- Unprecedented Heterogeneity in the Synonymous Substitution Rate within a Plant Genome
- (2014) Andan Zhu et al. MOLECULAR BIOLOGY AND EVOLUTION
- Sequencing of diverse mandarin, pummelo and orange genomes reveals complex history of admixture during citrus domestication
- (2014) G Albert Wu et al. NATURE BIOTECHNOLOGY
- Cytoplasmic Male Sterility-Associated Chimeric Open Reading Frames Identified by Mitochondrial Genome Sequencing of Four Cajanus Genotypes
- (2013) R. Tuteja et al. DNA RESEARCH
- Paternal leakage, heteroplasmy, and the evolution of plant mitochondrial genomes
- (2013) David E. McCauley NEW PHYTOLOGIST
- The Rf and Rf-like PPR in higher plants, a fast-evolving subclass of PPR genes
- (2013) Jennifer Dahan et al. RNA Biology
- Gemma: a resource for the reuse, sharing and meta-analysis of expression profiling data
- (2012) A. Zoubarev et al. BIOINFORMATICS
- A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff
- (2012) Pablo Cingolani et al. FLY
- Evidence against Equimolarity of Large Repeat Arrangements and a Predominant Master Circle Structure of the Mitochondrial Genome from a Monkeyflower (Mimulus guttatus) Lineage with Cryptic CMS
- (2012) Jeffrey P. Mower et al. Genome Biology and Evolution
- The draft genome of sweet orange (Citrus sinensis)
- (2012) Qiang Xu et al. NATURE GENETICS
- Comparative Transcript Profiling of a Male Sterile Cybrid Pummelo and Its Fertile Type Revealed Altered Gene Expression Related to Flower Development
- (2012) Bei-Bei Zheng et al. PLoS One
- Selection patterns on restorer-like genes reveal a conflict between nuclear and mitochondrial genomes throughout angiosperm evolution
- (2011) S. Fujii et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Survey of Branch Support Methods Demonstrates Accuracy, Power, and Robustness of Fast Likelihood-based Approximation Schemes
- (2011) Maria Anisimova et al. SYSTEMATIC BIOLOGY
- Discovery of global genomic re-organization based on comparison of two newly sequenced rice mitochondrial genomes with cytoplasmic male sterility-related genes
- (2010) Sota Fujii et al. BMC GENOMICS
- Paternal Leakage and Heteroplasmy of Mitochondrial Genomes in Silene vulgaris: Evidence From Experimental Crosses
- (2010) K. E. Bentley et al. GENETICS
- Fast model-based estimation of ancestry in unrelated individuals
- (2009) D. H. Alexander et al. GENOME RESEARCH
- Incongruence among mitochondrial, chloroplast and nuclear gene trees in Pinus subgenus Strobus (Pinaceae)
- (2009) Kiyomi Tsutsui et al. JOURNAL OF PLANT RESEARCH
- Effective population size and patterns of molecular evolution and variation
- (2009) Brian Charlesworth NATURE REVIEWS GENETICS
- The causes of mutation accumulation in mitochondrial genomes
- (2009) M. Neiman et al. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Detection of rare paternal chloroplast inheritance in controlled crosses of the endangered sunflower Helianthus verticillatus
- (2008) J R Ellis et al. HEREDITY
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started