Molecular Markers: An Overview of Data Published for Fungi over the Last Ten Years

Fungi in Freshwaters: Prioritising Aquatic Hyphomycetes in Conservation Goals

(2022) Juliana Barros et al.   Water

Advanced research tools for fungal diversity and its impact on forest ecosystem

(2022) Muhammad Adnan et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Current Insight into Traditional and Modern Methods in Fungal Diversity Estimates

(2022) Ajay Kumar Gautam et al.   Journal of Fungi

An empirical comparison of population genetic analyses using microsatellite and SNP data for a species of conservation concern

(2020) Shawna J. Zimmerman et al.   BMC GENOMICS

Methodological Aspects of Multiplex Terminal Restriction Fragment Length Polymorphism-Technique to Describe the Genetic Diversity of Soil Bacteria, Archaea and Fungi

(2020) Agata Gryta et al.   SENSORS

An Overview of Bioinformatics Tools for DNA Meta-Barcoding Analysis of Microbial Communities of Bioaerosols: Digest for Microbiologists

(2020) Hamza Mbareche et al.   Life-Basel

Relevance of plant and fungal DNA metabarcoding in aerobiology

(2019) Elisa Banchi et al.   AEROBIOLOGIA

HumanMycobiomeScan: a new bioinformatics tool for the characterization of the fungal fraction in metagenomic samples

(2019) Matteo Soverini et al.   BMC GENOMICS

ITS2 metabarcoding analysis complements lichen mycobiome diversity data

(2018) Elisa Banchi et al.   MYCOLOGICAL PROGRESS

Microbial forensics: new breakthroughs and future prospects

(2018) Manuela Oliveira et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Large-scale generation and analysis of filamentous fungal DNA barcodes boosts coverage for kingdom fungi and reveals thresholds for fungal species and higher taxon delimitation

(2018) D. Vu et al.   STUDIES IN MYCOLOGY

Microbial strain-level population structure and genetic diversity from metagenomes

(2017) Duy Tin Truong et al.   GENOME RESEARCH

Comparative assessment of SSR and SNP markers for inferring the population genetic structure of the common fungus Armillaria cepistipes

(2017) T Tsykun et al.   HEREDITY

Review and future prospects for DNA barcoding methods in forensic palynology

(2016) Karen L. Bell et al.   Forensic Science International-Genetics

Fungal DNA barcoding

(2016) Jianping Xu   GENOME

A comparative assessment of SNP and microsatellite markers for assigning parentage in a socially monogamous bird

(2016) Sara A. Kaiser et al.   Molecular Ecology Resources

BioMaS: a modular pipeline for Bioinformatic analysis of Metagenomic AmpliconS

(2015) Bruno Fosso et al.   BMC BIOINFORMATICS

PIPITS: an automated pipeline for analyses of fungal internal transcribed spacer sequences from the Illumina sequencing platform

(2015) Hyun S. Gweon et al.   Methods in Ecology and Evolution

Uniting the classification of cultured and uncultured bacteria and archaea using 16S rRNA gene sequences

(2014) Pablo Yarza et al.   NATURE REVIEWS MICROBIOLOGY

Spatial Distribution of Single-Nucleotide Polymorphisms Related to Fungicide Resistance and Implications for Sampling

(2014) H. Van der Heyden et al.   PHYTOPATHOLOGY

Comparison and Validation of Some ITS Primer Pairs Useful for Fungal Metabarcoding Studies

(2014) Michiel Op De Beeck et al.   PLoS One

Ten years of next-generation sequencing technology

(2014) Erwin L. van Dijk et al.   TRENDS IN GENETICS

Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi

(2012) C. L. Schoch et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Fungi: 1, 2, 3 … 5.1 million species?

(2011) Meredith Blackwell   AMERICAN JOURNAL OF BOTANY

CLOTU: An online pipeline for processing and clustering of 454 amplicon reads into OTUs followed by taxonomic annotation

(2011) Surendra Kumar et al.   BMC BIOINFORMATICS

Current trends in microsatellite genotyping

(2011) E. GUICHOUX et al.   Molecular Ecology Resources

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Four years of DNA barcoding: Current advances and prospects

(2008) Lise Frézal et al.   INFECTION GENETICS AND EVOLUTION

DNA barcoding for ecologists

(2008) Alice Valentini et al.   TRENDS IN ECOLOGY & EVOLUTION