Sharing Vitamin B12 between Bacteria and Microalgae Does Not Systematically Occur: Case Study of the Haptophyte Tisochrysis lutea

Global drivers of eukaryotic plankton biogeography in the sunlit ocean

(2021) Guilhem Sommeria-Klein et al.   SCIENCE

PICRUSt2 for prediction of metagenome functions

(2020) Gavin M. Douglas et al.   NATURE BIOTECHNOLOGY

Sharing vitamins: Cobamides unveil microbial interactions

(2020) Olga M. Sokolovskaya et al.   SCIENCE

Cobalamin Scarcity Modifies Carbon Allocation and Impairs DMSP Production Through Methionine Metabolism in the Haptophyte Microalgae Tisochrysis lutea

(2020) Charlotte Nef et al.   Frontiers in Marine Science

Multiomics resolution of molecular events during a day in the life of Chlamydomonas

(2019) Daniela Strenkert et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

(2019) Evan Bolyen et al.   NATURE BIOTECHNOLOGY

How haptophytes microalgae mitigate vitamin B12 limitation

(2019) Charlotte Nef et al.   Scientific Reports

Cross-exchange of B-vitamins underpins a mutualistic interaction between Ostreococcus tauri and Dinoroseobacter shibae

(2018) Matthew B. Cooper et al.   ISME Journal

Mixotrophy in Chlorophytes and Haptophytes—Effect of Irradiance, Macronutrient, Micronutrient and Vitamin Limitation

(2018) Ruth Anderson et al.   Frontiers in Microbiology

B Vitamins and Their Congeners as Potential Drivers of Microbial Community Composition in an Oligotrophic Marine Ecosystem

(2018) C. P. Suffridge et al.   Journal of Geophysical Research-Biogeosciences

Bacterial virulence against an oceanic bloom-forming phytoplankter is mediated by algal DMSP

(2018) Noa Barak-Gavish et al.   Science Advances

Underlying mechanisms for syntrophic metabolism of essential enzyme cofactors in microbial communities

(2017) Margaret F Romine et al.   ISME Journal

Cryopreservation studies of an artificial co-culture between the cobalamin-requiring green alga Lobomonas rostrata and the bacterium Mesorhizobium loti

(2017) Christian J. A. Ridley et al.   JOURNAL OF APPLIED PHYCOLOGY

25 years of serving the community with ribosomal RNA gene reference databases and tools

(2017) Frank Oliver Glöckner et al.   JOURNAL OF BIOTECHNOLOGY

Nextflow enables reproducible computational workflows

(2017) Paolo Di Tommaso et al.   NATURE BIOTECHNOLOGY

Quantitative proteomics of a B12 -dependent alga grown in coculture with bacteria reveals metabolic tradeoffs required for mutualism

(2017) Katherine E. Helliwell et al.   NEW PHYTOLOGIST

dbOTU3: A new implementation of distribution-based OTU calling

(2017) Scott W. Olesen et al.   PLoS One

Cyanobacteria and Eukaryotic Algae Use Different Chemical Variants of Vitamin B12

(2016) Katherine Emma Helliwell et al.   CURRENT BIOLOGY

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

MicroScope in 2017: an expanding and evolving integrated resource for community expertise of microbial genomes

(2016) David Vallenet et al.   NUCLEIC ACIDS RESEARCH

Dynamic metabolic exchange governs a marine algal-bacterial interaction

(2016) Einat Segev et al.   eLife

Methionine synthase interreplacement in diatom cultures and communities: Implications for the persistence of B12use by eukaryotic phytoplankton

(2016) Erin M. Bertrand et al.   LIMNOLOGY AND OCEANOGRAPHY

MeDuSa: a multi-draft based scaffolder

(2015) Emanuele Bosi et al.   BIOINFORMATICS

The Characterization of Novel Tissue Microbiota Using an Optimized 16S Metagenomic Sequencing Pipeline

(2015) Jérôme Lluch et al.   PLoS One

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Aquatic metagenomes implicate Thaumarchaeota in global cobalamin production

(2014) Andrew C Doxey et al.   ISME Journal

Evolutionary Ecology of the Marine Roseobacter Clade

(2014) Haiwei Luo et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Mixotrophic haptophytes are key bacterial grazers in oligotrophic coastal waters

(2013) Fernando Unrein et al.   ISME Journal

On the description of Tisochrysis lutea gen. nov. sp. nov. and Isochrysis nuda sp. nov. in the Isochrysidales, and the transfer of Dicrateria to the Prymnesiales (Haptophyta)

(2013) El Mahdi Bendif et al.   JOURNAL OF APPLIED PHYCOLOGY

Screening and selection of growth-promoting bacteria for Dunaliella cultures

(2013) M. Le Chevanton et al.   Algal Research-Biomass Biofuels and Bioproducts

Unimodal size scaling of phytoplankton growth and the size dependence of nutrient uptake and use

(2012) Emilio Marañón et al.   ECOLOGY LETTERS

Mutualistic interactions between vitamin B12-dependent algae and heterotrophic bacteria exhibit regulation

(2012) Elena Kazamia et al.   ENVIRONMENTAL MICROBIOLOGY

Vitamin B12 Synthesis and Salvage Pathways Were Acquired by Horizontal Gene Transfer to the Thermotogales

(2012) Kristen S. Swithers et al.   Genome Biology and Evolution

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

(2012) Anton Bankevich et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler

(2012) Ruibang Luo et al.   GigaScience

The Role of B Vitamins in Marine Biogeochemistry

(2011) Sergio A. Sañudo-Wilhelmy et al.   Annual Review of Marine Science

Roseobacticides: Small Molecule Modulators of an Algal-Bacterial Symbiosis

(2011) Mohammad R. Seyedsayamdost et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

The effect of vitamin B12on phytoplankton growth and community structure in the Gulf of Alaska

(2011) Florian Koch et al.   LIMNOLOGY AND OCEANOGRAPHY

The Jekyll-and-Hyde chemistry of Phaeobacter gallaeciensis

(2011) Mohammad R. Seyedsayamdost et al.   Nature Chemistry

Significant CO2 fixation by small prymnesiophytes in the subtropical and tropical northeast Atlantic Ocean

(2010) Ludwig Jardillier et al.   ISME Journal

Dimethylsulphoniopropionate (DMSP), DMSP-lyase activity (DLA) and dimethylsulphide (DMS) in 10 species of coccolithophore

(2010) DJ Franklin et al.   MARINE ECOLOGY PROGRESS SERIES

Most harmful algal bloom species are vitamin B1 and B12 auxotrophs

(2010) Y. Z. Tang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Comparative genomic analyses of nickel, cobalt and vitamin B12 utilization

(2009) Yan Zhang et al.   BMC GENOMICS

Distributions of dissolved vitamin B12 and Co in coastal and open-ocean environments

(2009) Caterina Panzeca et al.   ESTUARINE COASTAL AND SHELF SCIENCE

Extreme diversity in noncalcifying haptophytes explains a major pigment paradox in open oceans

(2009) H. Liu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Protistan assemblages across the Indian Ocean, with a specific emphasis on the picoeukaryotes

(2008) Fabrice Not et al.   DEEP-SEA RESEARCH PART I-OCEANOGRAPHIC RESEARCH PAPERS

Accurate taxonomy assignments from 16S rRNA sequences produced by highly parallel pyrosequencers

(2008) Z. Liu et al.   NUCLEIC ACIDS RESEARCH

Comparative Analysis of Human Gut Microbiota by Barcoded Pyrosequencing

(2008) Anders F. Andersson et al.   PLoS One