Aquatic metagenomes implicate Thaumarchaeota in global cobalamin production

Direct exchange of vitamin B12 is demonstrated by modelling the growth dynamics of algal–bacterial cocultures

(2014) Matthew AA Grant et al.   ISME Journal

Transcriptional Response of the Archaeal Ammonia Oxidizer Nitrosopumilus maritimus to Low and Environmentally Relevant Ammonia Concentrations

(2013) Tatsunori Nakagawa et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Single-cell genomics shedding light on marine Thaumarchaeota diversification

(2013) Haiwei Luo et al.   ISME Journal

Ammonia oxidation kinetics and temperature sensitivity of a natural marine community dominated by Archaea

(2013) Rachel E A Horak et al.   ISME Journal

Predominant archaea in marine sediments degrade detrital proteins

(2013) Karen G. Lloyd et al.   NATURE

IMG 4 version of the integrated microbial genomes comparative analysis system

(2013) Victor M. Markowitz et al.   NUCLEIC ACIDS RESEARCH

Phylogeny of Bacterial and Archaeal Genomes Using Conserved Genes: Supertrees and Supermatrices

(2013) Jenna Morgan Lang et al.   PLoS One

Enrichment and Genome Sequence of the Group I.1a Ammonia-Oxidizing Archaeon “Ca. Nitrosotenuis uzonensis” Representing a Clade Globally Distributed in Thermal Habitats

(2013) Elena V. Lebedeva et al.   PLoS One

Elucidation of the anaerobic pathway for the corrin component of cobalamin (vitamin B12)

(2013) S. J. Moore et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Community composition of ammonia-oxidizing archaea from surface and anoxic depths of oceanic oxygen minimum zones

(2013) Xuefeng Peng et al.   Frontiers in Microbiology

Physiology and Diversity of Ammonia-Oxidizing Archaea

(2012) David A. Stahl et al.   Annual Review of Microbiology

ArchaealamoA gene diversity points to distinct biogeography of ammonia-oxidizingCrenarchaeotain the ocean

(2012) Eva Sintes et al.   ENVIRONMENTAL MICROBIOLOGY

Role for urea in nitrification by polar marine Archaea

(2012) L. Alonso-Saez et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Vitamins in the sea

(2012) S. J. Giovannoni   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Multiple B-vitamin depletion in large areas of the coastal ocean

(2012) S. A. Sanudo-Wilhelmy et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Untangling Genomes from Metagenomes: Revealing an Uncultured Class of Marine Euryarchaeota

(2012) V. Iverson et al.   SCIENCE

The Black Queen Hypothesis: Evolution of Dependencies through Adaptive Gene Loss

(2012) J. J. Morris et al.   mBio

The Role of B Vitamins in Marine Biogeochemistry

(2011) Sergio A. Sañudo-Wilhelmy et al.   Annual Review of Marine Science

Interactive metagenomic visualization in a Web browser

(2011) Brian D Ondov et al.   BMC BIOINFORMATICS

Vitamin B12 biosynthesis gene diversity in the Ross Sea: the identification of a new group of putative polar B12 biosynthesizers

(2011) Erin M. Bertrand et al.   ENVIRONMENTAL MICROBIOLOGY

Differential photoinhibition of bacterial and archaeal ammonia oxidation

(2011) Stephanie N. Merbt et al.   FEMS MICROBIOLOGY LETTERS

Niche segregation of ammonia-oxidizing archaea and anammox bacteria in the Arabian Sea oxygen minimum zone

(2011) Angela Pitcher et al.   ISME Journal

Genome Sequence of an Ammonia-Oxidizing Soil Archaeon, "Candidatus Nitrosoarchaeum koreensis" MY1

(2011) B. K. Kim et al.   JOURNAL OF BACTERIOLOGY

The effect of vitamin B12on phytoplankton growth and community structure in the Gulf of Alaska

(2011) Florian Koch et al.   LIMNOLOGY AND OCEANOGRAPHY

Genome of a Low-Salinity Ammonia-Oxidizing Archaeon Determined by Single-Cell and Metagenomic Analysis

(2011) Paul C. Blainey et al.   PLoS One

Nitrososphaera viennensis, an ammonia oxidizing archaeon from soil

(2011) M. Tourna et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Inter-annual recurrence of archaeal assemblages in the coastal NW Mediterranean Sea (Blanes Bay Microbial Observatory)

(2010) Pierre E. Galand et al.   LIMNOLOGY AND OCEANOGRAPHY

Insights into the evolution of Archaea and eukaryotic protein modifier systems revealed by the genome of a novel archaeal group

(2010) Takuro Nunoura et al.   NUCLEIC ACIDS RESEARCH

FragGeneScan: predicting genes in short and error-prone reads

(2010) Mina Rho et al.   NUCLEIC ACIDS RESEARCH

Nitrosopumilus maritimus genome reveals unique mechanisms for nitrification and autotrophy in globally distributed marine crenarchaea

(2010) C. B. Walker et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Distinct gene set in two different lineages of ammonia-oxidizing archaea supports the phylum Thaumarchaeota

(2010) Anja Spang et al.   TRENDS IN MICROBIOLOGY

Metagenomes and metatranscriptomes from the L4 long-term coastal monitoring station in the Western English Channel

(2010) Jack A. Gilbert et al.   Standards in Genomic Sciences

Distributions of dissolved vitamin B12 and Co in coastal and open-ocean environments

(2009) Caterina Panzeca et al.   ESTUARINE COASTAL AND SHELF SCIENCE

Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and Bacteria

(2009) Willm Martens-Habbena et al.   NATURE

Relative contributions of archaea and bacteria to aerobic ammonia oxidation in the environment

(2008) James I. Prosser et al.   ENVIRONMENTAL MICROBIOLOGY

Potential cobalt limitation of vitamin B12synthesis in the North Atlantic Ocean

(2008) C. Panzeca et al.   GLOBAL BIOGEOCHEMICAL CYCLES

SAR11 marine bacteria require exogenous reduced sulphur for growth

(2008) H. James Tripp et al.   NATURE