Evolution of pesticide tolerance and associated changes in the microbiome in the water flea Daphnia magna

Genome Resequencing Reveals Rapid, Repeated Evolution in the Colorado Potato Beetle

(2022) Benjamin Pélissié et al.   MOLECULAR BIOLOGY AND EVOLUTION

Locally adapted gut microbiomes mediate host stress tolerance

(2021) Shira Houwenhuyse et al.   ISME Journal

Differential local genetic adaptation to pesticide use in organic and conventional agriculture in an aquatic non-target species

(2021) Rafaela A. Almeida et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Understanding host-microbiome-environment interactions: Insights from Daphnia as a model organism

(2021) Siddiq Akbar et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Changes in Microbiome Confer Multigenerational Host Resistance after Sub-toxic Pesticide Exposure

(2020) Guan-Hong Wang et al.   Cell Host & Microbe

Disparate effects of antibiotic-induced microbiome change and enhanced fitness in Daphnia magna

(2020) Asa Motiei et al.   PLoS One

The Impact of Environmental Chemicals on the Gut Microbiome

(2020) Karen Chiu et al.   TOXICOLOGICAL SCIENCES

Gut bacteria of the silkworm Bombyx mori facilitate host resistance against the toxic effects of organophosphate insecticides

(2020) Bosheng Chen et al.   ENVIRONMENT INTERNATIONAL

Mixed evidence for adaptation to environmental pollution

(2019) Alessandra Loria et al.   Evolutionary Applications

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

(2019) Evan Bolyen et al.   NATURE BIOTECHNOLOGY

Microbiomes as sources of emergent host phenotypes

(2019) J. B. Lynch et al.   SCIENCE

The Mercury-Tolerant Microbiota of the Zooplankton Daphnia Aids in Host Survival and Maintains Fecundity under Mercury Stress

(2019) Jiunn C. Fong et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Changes in the life history traits of Daphnia magna are associated with the gut microbiota composition shaped by diet and antibiotics

(2019) Siddiq Akbar et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Microbial Degradation of Organophosphate Pesticides: A Review

(2018) Shardendu KUMAR et al.   PEDOSPHERE

Whole metagenome sequencing reveals links between mosquito microbiota and insecticide resistance in malaria vectors

(2018) Nsa Dada et al.   Scientific Reports

Microbiota inoculum composition affects holobiont assembly and host growth in Daphnia

(2018) Martijn Callens et al.   Microbiome

Simple statistical identification and removal of contaminant sequences in marker-gene and metagenomics data

(2018) Nicole M. Davis et al.   Microbiome

Laboratory selection of chlorpyrifos resistance in an Invasive Pest, Phenacoccus solenopsis (Homoptera: Pseudococcidae): Cross-resistance, stability and fitness cost

(2017) Masood Ejaz et al.   PESTICIDE BIOCHEMISTRY AND PHYSIOLOGY

An alternative approach to risk rank chemicals on the threat they pose to the aquatic environment

(2017) Andrew C. Johnson et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Host-genotype dependent gut microbiota drives zooplankton tolerance to toxic cyanobacteria

(2017) Emilie Macke et al.   Nature Communications

The gut microbiota of insecticide-resistant insects houses insecticide-degrading bacteria: A potential source for biotechnological exploitation

(2017) Luis Gustavo de Almeida et al.   PLoS One

Detection of carboxylesterase and esterase activity in culturable gut bacterial flora isolated from diamondback moth, Plutella xylostella (Linnaeus), from India and its possible role in indoxacarb degradation

(2016) Shanivarsanthe Leelesh Ramya et al.   BRAZILIAN JOURNAL OF MICROBIOLOGY

Isolation, characterization and fingerprinting of some chlorpyrifos- degrading bacterial strains isolated from Egyptian pesticides-polluted soils

(2016) S Awad Nabil et al.   African Journal of Microbiology Research

The Gut Microbiota of Termites: Digesting the Diversity in the Light of Ecology and Evolution

(2015) Andreas Brune et al.   Annual Review of Microbiology

Gut Microbiota Orchestrates Energy Homeostasis during Cold

(2015) Claire Chevalier et al.   CELL

Bacteria-Mediated Effects of Antibiotics on Daphnia Nutrition

(2015) Elena Gorokhova et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Pesticide authorization in the EU—environment unprotected?

(2015) Sebastian Stehle et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Food availability affects the strength of mutualistic host–microbiota interactions in Daphnia magna

(2015) Martijn Callens et al.   ISME Journal

Fitting Linear Mixed-Effects Models Usinglme4

(2015) Douglas Bates et al.   Journal of Statistical Software

Gut microbiota mediate caffeine detoxification in the primary insect pest of coffee

(2015) Javier A. Ceja-Navarro et al.   Nature Communications

Enhanced degradation of five organophosphorus pesticides in skimmed milk by lactic acid bacteria and its potential relationship with phosphatase production

(2014) Ying-Hua Zhang et al.   FOOD CHEMISTRY

Bacterial epibionts of Daphnia: a potential route for the transfer of dissolved organic carbon in freshwater food webs

(2014) Ester M Eckert et al.   ISME Journal

Water fleas require microbiota for survival, growth and reproduction

(2014) Marilou P Sison-Mangus et al.   ISME Journal

Bacterial community analysis in chlorpyrifos enrichment cultures via DGGE and use of bacterial consortium for CP biodegradation

(2014) Shamsa Akbar et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

Proximity to agriculture is correlated with pesticide tolerance: evidence for the evolution of amphibian resistance to modern pesticides

(2013) Rickey D. Cothran et al.   Evolutionary Applications

The protective role of endogenous bacterial communities in chironomid egg masses and larvae

(2013) Yigal Senderovich et al.   ISME Journal

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

Biodegradation of acephate using a developed bacterial consortium and toxicological analysis using earthworms (Lumbricus terrestris) as a model animal

(2012) Swapnil S. Phugare et al.   INTERNATIONAL BIODETERIORATION & BIODEGRADATION

Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies

(2012) Anna Klindworth et al.   NUCLEIC ACIDS RESEARCH

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Symbiont-mediated insecticide resistance

(2012) Y. Kikuchi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Linking genes to communities and ecosystems: Daphnia as an ecogenomic model

(2012) B. E. Miner et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Experimental evolution

(2012) Tadeusz J. Kawecki et al.   TRENDS IN ECOLOGY & EVOLUTION

COLLATERAL DAMAGE: RAPID EXPOSURE-INDUCED EVOLUTION OF PESTICIDE RESISTANCE LEADS TO INCREASED SUSCEPTIBILITY TO PARASITES

(2011) Mieke Jansen et al.   EVOLUTION

The evolution of new enzyme function: lessons from xenobiotic metabolizing bacteria versus insecticide-resistant insects

(2011) Robyn J. Russell et al.   Evolutionary Applications

Reductive Evolution of Bacterial Genome in Insect Gut Environment

(2011) Naruo Nikoh et al.   Genome Biology and Evolution

Isolation of soil bacteria able to hydrolyze both organophosphate and carbamate pesticides

(2010) Eleni Chanika et al.   BIORESOURCE TECHNOLOGY

Long-term Hg pollution-induced structural shifts of bacterial community in the terrestrial isopod (Porcellio scaber) gut

(2010) Ales Lapanje et al.   ENVIRONMENTAL POLLUTION

Land use, genetic diversity and toxicant tolerance in natural populations of Daphnia magna

(2009) Anja Coors et al.   AQUATIC TOXICOLOGY

Comparative metagenomics of Daphnia symbionts

(2009) Weihong Qi et al.   BMC GENOMICS

POPULATION DYNAMICS DETERMINE GENETIC ADAPTATION TO TEMPERATURE INDAPHNIA

(2009) Wendy Van Doorslaer et al.   EVOLUTION

Resistance Gene Replacement in the Mosquito Culex pipiens: Fitness Estimation From Long-Term Cline Series

(2009) P. Labbe et al.   GENETICS

Diversity of chlorpyrifos-degrading bacteria isolated from chlorpyrifos-contaminated samples

(2008) Xiaohui Li et al.   INTERNATIONAL BIODETERIORATION & BIODEGRADATION

Biodegradation of chlorpyrifos and 3,5,6-trichloro-2-pyridinol by a newly isolated Paracoccus sp. strain TRP

(2008) Gangming Xu et al.   INTERNATIONAL BIODETERIORATION & BIODEGRADATION

Genetic and Phenotypic Diversity of Fenitrothion-Degrading Bacteria Isolated from Soils

(2008) Jong-Ok Ka   JOURNAL OF MICROBIOLOGY AND BIOTECHNOLOGY