Disparate effects of antibiotic-induced microbiome change and enhanced fitness in Daphnia magna

Host genotype-specific microbiota do not influence the susceptibility of D. magna to a bacterial pathogen

(2018) Marilou P. Sison-Mangus et al.   Scientific Reports

Microbiota inoculum composition affects holobiont assembly and host growth in Daphnia

(2018) Martijn Callens et al.   Microbiome

Is “Preparation for Oxidative Stress” a Case of Physiological Conditioning Hormesis?

(2018) Marcus F. Oliveira et al.   Frontiers in Physiology

Association between oxidative status and the composition of intestinal microbiota along the gastrointestinal tract

(2017) Marianna Gyuraszova et al.   MEDICAL HYPOTHESES

Gut Dysbiosis in Animals Due to Environmental Chemical Exposures

(2017) Cheryl S. Rosenfeld   Frontiers in Cellular and Infection Microbiology

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

Comparative Activity of Ciprofloxacin, Levofloxacin and Moxifloxacin against Klebsiella pneumoniae, Pseudomonas aeruginosa and Stenotrophomonas maltophilia Assessed by Minimum Inhibitory Concentrations and Time-Kill Studies

(2016) Antoine Grillon et al.   PLoS One

Effects of enrofloxacin, ciprofloxacin, and trimethoprim on two generations of Daphnia magna

(2015) Mirco Dalla Bona et al.   ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY

Betaproteobacteria L imnohabitans strains increase fecundity in the crustacean D aphnia magna : symbiotic relationship between major bacterioplankton and zooplankton in freshwater ecosystem

(2015) Saranya Peerakietkhajorn et al.   ENVIRONMENTAL MICROBIOLOGY

Bacteria-Mediated Effects of Antibiotics on Daphnia Nutrition

(2015) Elena Gorokhova et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Symbiotic bacteria contribute to increasing the population size of a freshwater crustacean,Daphnia magna

(2015) Saranya Peerakietkhajorn et al.   Environmental Microbiology Reports

Thermophilic and alkaliphilic Actinobacteria: biology and potential applications

(2015) L. Shivlata et al.   Frontiers in Microbiology

Feeding Activity and Xenobiotics Modulate Oxidative Status in Daphnia magna: Implications for Ecotoxicological Testing

(2014) Sara Furuhagen et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Toxicity of the veterinary sulfonamide antibiotic sulfamonomethoxine to five aquatic organisms

(2014) Da-Ji Huang et al.   ENVIRONMENTAL TOXICOLOGY AND PHARMACOLOGY

Bacterial epibionts of Daphnia: a potential route for the transfer of dissolved organic carbon in freshwater food webs

(2014) Ester M Eckert et al.   ISME Journal

Water fleas require microbiota for survival, growth and reproduction

(2014) Marilou P Sison-Mangus et al.   ISME Journal

Gut microbiota–generated metabolites in animal health and disease

(2014) Won-Jae Lee et al.   Nature Chemical Biology

Control of pathogens and pathobionts by the gut microbiota

(2013) Nobuhiko Kamada et al.   NATURE IMMUNOLOGY

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

Animals in a bacterial world, a new imperative for the life sciences

(2013) Margaret McFall-Ngai et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Coverage-based rarefaction and extrapolation: standardizing samples by completeness rather than size

(2012) Anne Chao et al.   ECOLOGY

The influence of bacteria-dominated diets on Daphnia magna somatic growth, reproduction, and lipid composition

(2012) Sami J. Taipale et al.   FEMS MICROBIOLOGY ECOLOGY

Contrasting trends in distribution of four major planktonic betaproteobacterial groups along a pH gradient of epilimnia of 72 freshwater habitats

(2012) Jan Jezbera et al.   FEMS MICROBIOLOGY ECOLOGY

Differential expression analysis of multifactor RNA-Seq experiments with respect to biological variation

(2012) Davis J. McCarthy et al.   NUCLEIC ACIDS RESEARCH

Antibiotic-Induced Change of Bacterial Communities Associated with the Copepod Nitocra spinipes

(2012) Anna Edlund et al.   PLoS One

Composition and Stability of the Microbial Community inside the Digestive Tract of the Aquatic Crustacean Daphnia magna

(2011) Heike M. Freese et al.   MICROBIAL ECOLOGY

Shifting the balance: antibiotic effects on host–microbiota mutualism

(2011) Benjamin P. Willing et al.   NATURE REVIEWS MICROBIOLOGY

Dietary Essential Amino Acids Affect the Reproduction of the Keystone Herbivore Daphnia pulex

(2011) Patrick Fink et al.   PLoS One

Single and combined toxicity of pharmaceuticals at environmentally relevant concentrations in Daphnia magna – A multigenerational study

(2010) Sabine Dietrich et al.   CHEMOSPHERE

Limnohabitans planktonicus sp. nov. and Limnohabitans parvus sp. nov., planktonic betaproteobacteria isolated from a freshwater reservoir, and emended description of the genus Limnohabitans

(2010) V. Kasalicky et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Comparative metagenomics of Daphnia symbionts

(2009) Weihong Qi et al.   BMC GENOMICS

The toxicity of sulfamethazine to Daphnia magna and its additivity to other veterinary sulfonamides and trimethoprim

(2009) Marco De Liguoro et al.   CHEMOSPHERE