Genome-wide association and genotype by environment interactions for growth traits in U.S. Red Angus cattle

GWAS revealed effect of genotype × environment interactions for grain yield of Nebraska winter wheat

(2021) Shamseldeen Eltaher et al.   BMC GENOMICS

Genome-wide association analyses identify genotype-by-environment interactions of growth traits in Simmental cattle

(2021) Camila U. Braz et al.   Scientific Reports

Powerful detection of polygenic selection and evidence of environmental adaptation in US beef cattle

(2021) Troy N. Rowan et al.   PLoS Genetics

Genetic architecture of quantitative traits in beef cattle revealed by genome wide association studies of imputed whole genome sequence variants: I: feed efficiency and component traits

(2020) Feng Zhang et al.   BMC GENOMICS

Genetic architecture of quantitative traits in beef cattle revealed by genome wide association studies of imputed whole genome sequence variants: II: carcass merit traits

(2020) Yining Wang et al.   BMC GENOMICS

De novo assembly of the cattle reference genome with single-molecule sequencing

(2020) Benjamin D Rosen et al.   GigaScience

HIGD-Driven Regulation of Cytochrome c Oxidase Biogenesis and Function

(2020) Alba Timón-Gómez et al.   Cells

Increased Expression of DNAJC12 is Associated with Aggressive Phenotype of Gastric Cancer

(2019) Yasuo Uno et al.   ANNALS OF SURGICAL ONCOLOGY

Deletion of both centrin 2 (CETN2) and CETN3 destabilizes the distal connecting cilium of mouse photoreceptors

(2019) Guoxin Ying et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Genome-Wide Association Study for Milk Protein Composition Traits in a Chinese Holstein Population Using a Single-Step Approach

(2019) Chenghao Zhou et al.   Frontiers in Genetics

Multi-population GWAS and enrichment analyses reveal novel genomic regions and promising candidate genes underlying bovine milk fatty acid composition

(2019) G. Gebreyesus et al.   BMC GENOMICS

High-density genotyping reveals signatures of selection related to acclimation and economically important traits in 15 local sheep breeds from Russia

(2019) Andrey A. Yurchenko et al.   BMC GENOMICS

A Large-Scale Genome-Wide Association Study in U.S. Holstein Cattle

(2019) Jicai Jiang et al.   Frontiers in Genetics

Genome‐wide association study reveals candidate genes associated with body measurement traits in Chinese Wagyu beef cattle

(2019) B. An et al.   ANIMAL GENETICS

Quick assessment for systematic test statistic inflation/deflation due to null model misspecifications in genome-wide environment interaction studies

(2019) Masao Ueki et al.   PLoS One

Validation of 46 loci associated with female fertility traits in cattle

(2019) Jennifer N. Kiser et al.   BMC GENOMICS

Combining multi-population datasets for joint genome-wide association and meta-analyses: The case of bovine milk fat composition traits

(2019) G. Gebreyesus et al.   JOURNAL OF DAIRY SCIENCE

Identification of whole‐genome significant single nucleotide polymorphisms in candidate genes associated with body conformation traits in Chinese Holstein cattle

(2019) Zhengui Yan et al.   ANIMAL GENETICS

Genome-wide association and genotype by environment interactions for growth traits in U.S. Gelbvieh cattle

(2019) Johanna L. Smith et al.   BMC GENOMICS

Cardiolipin is essential for early embryonic viability and mitochondrial integrity of neurons in mammals

(2019) Takaoki Kasahara et al.   FASEB JOURNAL

PARD3 dysfunction in conjunction with dynamic HIPPO signaling drives cortical enlargement with massive heterotopia

(2018) Wenying Angela Liu et al.   GENES & DEVELOPMENT

Meta-analysis of genome-wide association studies for cattle stature identifies common genes that regulate body size in mammals

(2018) Aniek C. Bouwman et al.   NATURE GENETICS

Genetic parameters for fertility and production traits in Red Angus cattle

(2018) Ryan J Boldt et al.   JOURNAL OF ANIMAL SCIENCE

Genomic study and Medical Subject Headings enrichment analysis of early pregnancy rate and antral follicle numbers in Nelore heifers1,2

(2017) G. A. Oliveira Júnior et al.   JOURNAL OF ANIMAL SCIENCE

Human mitochondrial cytochromecoxidase assembly factor COX18 acts transiently as a membrane insertase within the subunit 2 maturation module

(2017) Myriam Bourens et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Genome-wide association analysis and pathways enrichment for lactation persistency in Canadian Holstein cattle

(2017) D.N. Do et al.   JOURNAL OF DAIRY SCIENCE

The genetic and biological basis of feed efficiency in mid-lactation Holstein dairy cows

(2017) L.C. Hardie et al.   JOURNAL OF DAIRY SCIENCE

Genomic analysis of stayability in Nellore cattle

(2017) Daniela Barreto Amaral Teixeira et al.   PLoS One

Essential but partially redundant roles for POU4F1/Brn-3a and POU4F2/Brn-3b transcription factors in the developing heart

(2017) Lauren J Maskell et al.   Cell Death & Disease

Several microRNAs could predict survival in patients with hepatitis B-related liver cancer

(2017) Ye Zhen et al.   Scientific Reports

Candidate genes for male and female reproductive traits in Canchim beef cattle

(2017) Marcos Eli Buzanskas et al.   Journal of Animal Science and Biotechnology

Network Analysis Reveals Putative Genes Affecting Meat Quality in Angus Cattle

(2017) Raluca G. Mateescu et al.   Frontiers in Genetics

Ror2 signaling regulates Golgi structure and transport through IFT20 for tumor invasiveness

(2017) Michiru Nishita et al.   Scientific Reports

Genome-wide association between single nucleotide polymorphisms with beef fatty acid profile in Nellore cattle using the single step procedure

(2016) Marcos V. A. Lemos et al.   BMC GENOMICS

The primary cilium as a cellular receiver: organizing ciliary GPCR signaling

(2016) Keren I Hilgendorf et al.   CURRENT OPINION IN CELL BIOLOGY

Genome-wide prediction models that incorporate de novo GWAS are a powerful new tool for tropical rice improvement

(2016) J E Spindel et al.   HEREDITY

Reference-based phasing using the Haplotype Reference Consortium panel

(2016) Po-Ru Loh et al.   NATURE GENETICS

High density genome wide genotyping-by-sequencing and association identifies common and low frequency SNPs, and novel candidate genes influencing cow milk traits

(2016) Eveline M. Ibeagha-Awemu et al.   Scientific Reports

Genome-Assisted Prediction of Quantitative Traits Using the R Package sommer

(2016) Giovanny Covarrubias-Pazaran   PLoS One

Genome-Wide Association Study of Meat Quality Traits in Nellore Cattle

(2016) Ana F. B. Magalhães et al.   PLoS One

Kcnip1 a Ca2+-dependent transcriptional repressor regulates the size of the neural plate in Xenopus

(2015) Isabelle Néant et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH

Polymorphism in microRNA-binding site in HNF1B influences the susceptibility of type 2 diabetes mellitus: a population based case–control study

(2015) Naoki Goda et al.   BMC Medical Genetics

Maximal Expression of the Evolutionarily Conserved Slit2 Gene Promoter Requires Sp1

(2015) Jacquelyn Saunders et al.   CELLULAR AND MOLECULAR NEUROBIOLOGY

NCAPG is differentially expressed during longissimus muscle development and is associated with growth traits in Chinese Qinchuan beef cattle

(2015) Yu Liu et al.   GENETICS AND MOLECULAR BIOLOGY

A genome-wide association study identifies variants in KCNIP4 associated with ACE inhibitor-induced cough

(2015) J D Mosley et al.   PHARMACOGENOMICS JOURNAL

Multi-Trait GWAS and New Candidate Genes Annotation for Growth Curve Parameters in Brahman Cattle

(2015) Aline Camporez Crispim et al.   PLoS One

A Multivariate Genome-Wide Association Analysis of 10 LDL Subfractions, and Their Response to Statin Treatment, in 1868 Caucasians

(2015) Heejung Shim et al.   PLoS One

Agricultural Genomics: Commercial Applications Bring Increased Basic Research Power

(2015) Jared E. Decker   PLoS Genetics

Genomic Heritability of Bovine Growth Using a Mixed Model

(2014) Jihye Ryu et al.   ASIAN-AUSTRALASIAN JOURNAL OF ANIMAL SCIENCES

Validation of associations for female fertility traits in Nordic Holstein, Nordic Red and Jersey dairy cattle

(2014) Johanna K Höglund et al.   BMC GENETICS

Large-effect pleiotropic or closely linked QTL segregate within and across ten US cattle breeds

(2014) Mahdi Saatchi et al.   BMC GENOMICS

Genome-wide interaction of genotype by erythrocyte n-3 fatty acids contributes to phenotypic variance of diabetes-related traits

(2014) Ju-Sheng Zheng et al.   BMC GENOMICS

Multibreed genome wide association can improve precision of mapping causative variants underlying milk production in dairy cattle

(2014) Lesley-Ann Raven et al.   BMC GENOMICS

Molecular characterization, expression profiles, and analysis of Qinchuan cattle SIRT1 gene association with meat quality and body measurement traits (Bos taurus)

(2014) Linsheng Gui et al.   MOLECULAR BIOLOGY REPORTS

Efficient multivariate linear mixed model algorithms for genome-wide association studies

(2014) Xiang Zhou et al.   NATURE METHODS

Genome-Wide Association for Growth Traits in Canchim Beef Cattle

(2014) Marcos E. Buzanskas et al.   PLoS One

An evolutionary approach uncovers a diverse response of tRNA 2-thiolation to elevated temperatures in yeast

(2014) Fiona Alings et al.   RNA

A Multi-Trait, Meta-analysis for Detecting Pleiotropic Polymorphisms for Stature, Fatness and Reproduction in Beef Cattle

(2014) Sunduimijid Bolormaa et al.   PLoS Genetics

FAM190A Deficiency Creates a Cell Division Defect

(2013) Kalpesh Patel et al.   AMERICAN JOURNAL OF PATHOLOGY

Genome-wide association study for birth weight in Nellore cattle points to previously described orthologous genes affecting human and bovine height

(2013) Yuri T Utsunomiya et al.   BMC GENETICS

Genome-wide association and prediction of direct genomic breeding values for composition of fatty acids in Angus beef cattlea

(2013) Mahdi Saatchi et al.   BMC GENOMICS

Genome-wide association analyses for growth and feed efficiency traits in beef cattle1

(2013) D. Lu et al.   JOURNAL OF ANIMAL SCIENCE

Adipose and Muscle Tissue Gene Expression of Two Genes (NCAPG and LCORL) Located in a Chromosomal Region Associated with Cattle Feed Intake and Gain

(2013) Amanda K. Lindholm-Perry et al.   PLoS One

All SNPs Are Not Created Equal: Genome-Wide Association Studies Reveal a Consistent Pattern of Enrichment among Functionally Annotated SNPs

(2013) Andrew J. Schork et al.   PLoS Genetics

Genome-wide associations for milk production and somatic cell score in Holstein-Friesian cattle in Ireland

(2012) Brian K Meredith et al.   BMC GENETICS

Functional Genomic Analysis of Variation on Beef Tenderness Induced by Acute Stress in Angus Cattle

(2012) Chunping Zhao et al.   COMPARATIVE AND FUNCTIONAL GENOMICS

Genomic imputation and evaluation using high-density Holstein genotypes

(2012) P.M. VanRaden et al.   JOURNAL OF DAIRY SCIENCE

Fast and accurate genotype imputation in genome-wide association studies through pre-phasing

(2012) Bryan Howie et al.   NATURE GENETICS

Genome-wide efficient mixed-model analysis for association studies

(2012) Xiang Zhou et al.   NATURE GENETICS

Genome-wide association analysis for feed efficiency in Angus cattle

(2011) M. M. Rolf et al.   ANIMAL GENETICS

Genome-wide association of milk fatty acids in Dutch dairy cattle

(2011) Aniek C Bouwman et al.   BMC GENETICS

Genome-wide association analysis of thirty one production, health, reproduction and body conformation traits in contemporary U.S. Holstein cows

(2011) John B Cole et al.   BMC GENOMICS

Genomic inflation factors under polygenic inheritance

(2011) Jian Yang et al.   EUROPEAN JOURNAL OF HUMAN GENETICS

Polymorphic Regions Affecting Human Height Also Control Stature in Cattle

(2011) J. E. Pryce et al.   GENETICS

Hot topic: Performance of bovine high-density genotyping platforms in Holsteins and Jerseys

(2011) G. Rincon et al.   JOURNAL OF DAIRY SCIENCE

The genomic evaluation system in the United States: Past, present, future

(2011) G.R. Wiggans et al.   JOURNAL OF DAIRY SCIENCE

Disruption of the Podosome Adaptor Protein TKS4 (SH3PXD2B) Causes the Skeletal Dysplasia, Eye, and Cardiac Abnormalities of Frank-Ter Haar Syndrome

(2010) Zafar Iqbal et al.   AMERICAN JOURNAL OF HUMAN GENETICS

A genome scan for quantitative trait loci influencing carcass, post-natal growth and reproductive traits in commercial Angus cattle

(2010) M. C. McClure et al.   ANIMAL GENETICS

Cardiolipin Remodeling by ALCAT1 Links Oxidative Stress and Mitochondrial Dysfunction to Obesity

(2010) Jia Li et al.   Cell Metabolism

Genome-Wide Association Study Identifies Two Major Loci Affecting Calving Ease and Growth-Related Traits in Cattle

(2010) H. Pausch et al.   GENETICS

A validated genome-wide association study in 2 dairy cattle breeds for milk production and fertility traits using variable length haplotypes

(2010) J.E. Pryce et al.   JOURNAL OF DAIRY SCIENCE

Nek10 Mediates G2/M Cell Cycle Arrest and MEK Autoactivation in Response to UV Irradiation

(2010) L. S. Moniz et al.   MOLECULAR AND CELLULAR BIOLOGY

A genome wide association study for QTL affecting direct and maternal effects of stillbirth and dystocia in cattle

(2009) H. G. Olsen et al.   ANIMAL GENETICS

Cross-breed comparisons identified a critical 591-kb region for bovine carcass weight QTL (CW-2) on chromosome 6 and the Ile-442-Met substitution in NCAPG as a positional candidate

(2009) Kouji Setoguchi et al.   BMC GENETICS

A whole genome Bayesian scan for adaptive genetic divergence in West African cattle

(2009) Mathieu Gautier et al.   BMC GENOMICS

Glioblastoma Proto-oncogene SEC61  Is Required for Tumor Cell Survival and Response to Endoplasmic Reticulum Stress

(2009) Z. Lu et al.   CANCER RESEARCH

Dissection of Genetic Factors Modulating Fetal Growth in Cattle Indicates a Substantial Role of the Non-SMC Condensin I Complex, Subunit G (NCAPG) Gene

(2009) A. Eberlein et al.   GENETICS

Estimation of genetic parameters for body weights, scrotal circumference, and testicular volume measured at different ages in Nellore cattle1

(2009) A. A. Boligon et al.   JOURNAL OF ANIMAL SCIENCE

Development and Characterization of a High Density SNP Genotyping Assay for Cattle

(2009) Lakshmi K. Matukumalli et al.   PLoS One

Whole-genome scan for quantitative trait loci associated with birth weight, gestation length and passive immune transfer in a Holstein × Jersey crossbred population

(2008) C. Maltecca et al.   ANIMAL GENETICS

A Whole-Genome Scan to Map Quantitative Trait Loci for Conformation and Functional Traits in Canadian Holstein Bulls

(2008) D. Kolbehdari et al.   JOURNAL OF DAIRY SCIENCE

Genome-wide association analysis identifies 20 loci that influence adult height

(2008) Michael N Weedon et al.   NATURE GENETICS

Many sequence variants affecting diversity of adult human height

(2008) Daniel F Gudbjartsson et al.   NATURE GENETICS

Adaptations to Climate in Candidate Genes for Common Metabolic Disorders

(2008) Angela M. Hancock et al.   PLoS Genetics

Spatio-Temporal Expression Patterns of Aurora Kinases A, B, and C and Cytoplasmic Polyadenylation-Element-Binding Protein in Bovine Oocytes During Meiotic Maturation1

(2007) Svetlana Uzbekova et al.   BIOLOGY OF REPRODUCTION