High-density genotyping reveals signatures of selection related to acclimation and economically important traits in 15 local sheep breeds from Russia

Revealing the selection history of adaptive loci using genome-wide scans for selection: an example from domestic sheep

(2018) Christina Marie Rochus et al.   BMC GENOMICS

Development and validation of a small SNP panel for feed efficiency in beef cattle

(2018) M K Abo-Ismail et al.   JOURNAL OF ANIMAL SCIENCE

Genome-wide association studies to identify quantitative trait loci affecting milk production traits in water buffalo

(2018) J.J. Liu et al.   JOURNAL OF DAIRY SCIENCE

Comparative proteomic analyses using iTRAQ-labeling provides insights into fiber diversity in sheep and goats

(2018) Yan Li et al.   Journal of Proteomics

Functional role of ADAMTS5 in adiposity and metabolic health

(2018) Dries Bauters et al.   PLoS One

Sheep genome functional annotation reveals proximal regulatory elements contributed to the evolution of modern breeds

(2018) Marina Naval-Sanchez et al.   Nature Communications

Whole-genome sequences of 89 Chinese sheep suggest role of RXFP2 in the development of unique horn phenotype as response to semi-feralization

(2018) Zhangyuan Pan et al.   GigaScience

Scans for signatures of selection in Russian cattle breed genomes reveal new candidate genes for environmental adaptation and acclimation

(2018) Andrey A. Yurchenko et al.   Scientific Reports

Characterisation of gene expression related to milk fat synthesis in the mammary tissue of lactating yaks

(2017) Jung Nam Lee et al.   JOURNAL OF DAIRY RESEARCH

Genomic Analysis Suggests KITLG is Responsible for a Roan Pattern in two Pakistani Goat Breeds

(2017) Andrea Talenti et al.   JOURNAL OF HEREDITY

Genomic Reconstruction of the History of Native Sheep Reveals the Peopling Patterns of Nomads and the Expansion of Early Pastoralism in East Asia

(2017) Yong-Xin Zhao et al.   MOLECULAR BIOLOGY AND EVOLUTION

Genome-Wide Identification of the Mutation Underlying Fleece Variation and Discriminating Ancestral Hairy Species from Modern Woolly Sheep

(2017) Julie Demars et al.   MOLECULAR BIOLOGY AND EVOLUTION

Comparative transcriptome analysis reveals potentially novel roles of Homeobox genes in adipose deposition in fat-tailed sheep

(2017) Danju Kang et al.   Scientific Reports

Loss of ADAMTS5 enhances brown adipose tissue mass and promotes browning of white adipose tissue via CREB signaling

(2017) Dries Bauters et al.   Molecular Metabolism

Biallelic Variants in UBA5 Link Dysfunctional UFM1 Ubiquitin-like Modifier Pathway to Severe Infantile-Onset Encephalopathy

(2016) Mikko Muona et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Temporal variation in coat colour (genotypes) supports major changes in the Nordic cattle population after Iron Age

(2016) M. Niemi et al.   ANIMAL GENETICS

Molecular Cloning, mRNA Expression, and Localization of the G-protein Subunit Galphaq in Sheep Testis and Epididymis

(2016) Zhen Li et al.   ASIAN-AUSTRALASIAN JOURNAL OF ANIMAL SCIENCES

pong: fast analysis and visualization of latent clusters in population genetic data

(2016) Aaron A. Behr et al.   BIOINFORMATICS

Genome-wide analysis reveals signatures of selection for important traits in domestic sheep from different ecoregions

(2016) Zhaohua Liu et al.   BMC GENOMICS

TECPR2 mutations cause a new subtype of familial dysautonomia like hereditary sensory autonomic neuropathy with intellectual disability

(2016) Gali Heimer et al.   EUROPEAN JOURNAL OF PAEDIATRIC NEUROLOGY

Conditional restoration and inactivation ofRbm47reveal its tissue-context requirement for viability and growth

(2016) Nicolas Fossat et al.   GENESIS

Uncovering Adaptation from Sequence Data: Lessons from Genome Resequencing of Four Cattle Breeds

(2016) Simon Boitard et al.   GENETICS

Desmoglein 4 diversity and correlation analysis with coat color in goat

(2016) G.X. E et al.   GENETICS AND MOLECULAR RESEARCH

Transcriptome expression analysis of candidate milk genes affecting cheese-related traits in 2 sheep breeds

(2016) A. Suárez-Vega et al.   JOURNAL OF DAIRY SCIENCE

Isolation of RNA from milk somatic cells as an alternative to biopsies of mammary tissue for nutrigenomic studies in dairy ewes

(2016) P.G. Toral et al.   JOURNAL OF DAIRY SCIENCE

Emerging roles of the myocardin family of proteins in lipid and glucose metabolism

(2016) Karl Swärd et al.   JOURNAL OF PHYSIOLOGY-LONDON

minotaur: A platform for the analysis and visualization of multivariate results from genome scans with R Shiny

(2016) Robert Verity et al.   Molecular Ecology Resources

Regional Fluctuation in the Functional Consequence of LINE-1 Insertion in the Mitf Gene: The Black Spotting Phenotype Arisen from the Mitfmi-bw Mouse Lacking Melanocytes

(2016) Kazuhisa Takeda et al.   PLoS One

Genome-wide analysis reveals adaptation to high altitudes in Tibetan sheep

(2016) Caihong Wei et al.   Scientific Reports

A genome scan of recent positive selection signatures in three sheep populations

(2016) Fu-ping ZHAO et al.   Journal of Integrative Agriculture

Uncovering Adaptation from Sequence Data: Lessons from Genome Resequencing of Four Cattle Breeds

(2016) Simon Boitard et al.   GENETICS

Nuclear Localization of the Autism Candidate Gene Neurobeachin and Functional Interaction with the NOTCH1 Intracellular Domain Indicate a Role in Regulating Transcription

(2016) Krizia Tuand et al.   PLoS One

Genomic analysis identified a potential novel molecular mechanism for high-altitude adaptation in sheep at the Himalayas

(2016) Neena Amatya Gorkhali et al.   Scientific Reports

Reverse genetic screen for loss-of-function mutations uncovers a frameshifting deletion in the melanophilin gene accountable for a distinctive coat color in Belgian Blue cattle

(2015) Wanbo Li et al.   ANIMAL GENETICS

Key pathways regulated by HoxA9,10,11/HoxD9,10,11 during limb development

(2015) Anna M. Raines et al.   BMC DEVELOPMENTAL BIOLOGY

Genome-wide analysis reveals population structure and selection in Chinese indigenous sheep breeds

(2015) Caihong Wei et al.   BMC GENOMICS

Loss of function mutations inHARScause a spectrum of inherited peripheral neuropathies

(2015) Dana Safka Brozkova et al.   BRAIN

Cellular origins of cold-induced brown adipocytes in adult mice

(2015) Yun-Hee Lee et al.   FASEB JOURNAL

Multiple genomic signatures of selection in goats and sheep indigenous to a hot arid environment

(2015) E-S Kim et al.   HEREDITY

Properties of different selection signature statistics and a new strategy for combining them

(2015) Y Ma et al.   HEREDITY

Mitogenomic Meta-Analysis Identifies Two Phases of Migration in the History of Eastern Eurasian Sheep

(2015) Feng-Hua Lv et al.   MOLECULAR BIOLOGY AND EVOLUTION

Intraflagellar transport is essential for mammalian spermiogenesis but is absent in mature sperm

(2015) Jovenal T. San Agustin et al.   MOLECULAR BIOLOGY OF THE CELL

Genome-Wide Analysis of Positively Selected Genes in Seasonal and Non-Seasonal Breeding Species

(2015) Yuhuan Meng et al.   PLoS One

Recent Selective Sweeps in North American Drosophila melanogaster Show Signatures of Soft Sweeps

(2015) Nandita R. Garud et al.   PLoS Genetics

Differential Genes Expression between Fertile and Infertile Spermatozoa Revealed by Transcriptome Analysis

(2015) Sandeep Kumar Bansal et al.   PLoS One

Signatures of selection in sheep bred for resistance or susceptibility to gastrointestinal nematodes

(2014) Kathryn M McRae et al.   BMC GENOMICS

Identification of complete linkage disequilibrium in the DSG4 gene and its association with wool length and crimp in Chinese indigenous sheep

(2014) Y.H. Ling et al.   GENETICS AND MOLECULAR RESEARCH

Adaptations to Climate-Mediated Selective Pressures in Sheep

(2014) Feng-Hua Lv et al.   MOLECULAR BIOLOGY AND EVOLUTION

Genome-Wide Association Study for Wool Production Traits in a Chinese Merino Sheep Population

(2014) Zhipeng Wang et al.   PLoS One

A Simple Repeat Polymorphism in the MITF-M Promoter Is a Key Regulator of White Spotting in Dogs

(2014) Izabella Baranowska Körberg et al.   PLoS One

Selection Signatures in Worldwide Sheep Populations

(2014) Maria-Ines Fariello et al.   PLoS One

The sheep genome illuminates biology of the rumen and lipid metabolism

(2014) Y. Jiang et al.   SCIENCE

Phenotypic Dissection of Bone Mineral Density Reveals Skeletal Site Specificity and Facilitates the Identification of Novel Loci in the Genetic Regulation of Bone Mass Attainment

(2014) John P. Kemp et al.   PLoS Genetics

A candidate multimodal functional genetic network for thermal adaptation

(2014) Katharina C. Wollenberg Valero et al.   PeerJ

A genome-wide association study indicatesLCORL/NCAPGas a candidate locus for withers height in German Warmblood horses

(2013) J. Tetens et al.   ANIMAL GENETICS

Signatures of selection identify loci associated with milk yield in sheep

(2013) Bianca Moioli et al.   BMC GENETICS

Detecting Signatures of Selection Through Haplotype Differentiation Among Hierarchically Structured Populations

(2013) M. I. Fariello et al.   GENETICS

Inherited neuropathies: Clinical overview and update

(2013) Christopher J. Klein et al.   MUSCLE & NERVE

Novel Insights into the Bovine Polled Phenotype and Horn Ontogenesis in Bovidae

(2013) Aurélie Allais-Bonnet et al.   PLoS One

Transcriptome Profile at Different Physiological Stages Reveals Potential Mode for Curly Fleece in Chinese Tan Sheep

(2013) Xiaolong Kang et al.   PLoS One

The Highly Prolific Phenotype of Lacaune Sheep Is Associated with an Ectopic Expression of the B4GALNT2 Gene within the Ovary

(2013) Laurence Drouilhet et al.   PLoS Genetics

Association of the polymorphism g.8514C>T in the osteopontin gene (SPP1) with milk yield in the dairy cattle breed Girolando

(2012) F. Mello et al.   ANIMAL GENETICS

A high-performance computing toolset for relatedness and principal component analysis of SNP data

(2012) X. Zheng et al.   BIOINFORMATICS

Genomic scan of selective sweeps in thin and fat tail sheep breeds for identifying of candidate regions associated with fat deposition

(2012) Mohammad Hossein Moradi et al.   BMC GENETICS

Identification of the e allele at the Extension locus (MC1R) in Brazilian Creole sheep and its role in wool color variation

(2012) D. Hepp et al.   GENETICS AND MOLECULAR RESEARCH

Identification of Sheep Ovary Genes Potentially Associated with Off-season Reproduction

(2012) Lei Chen et al.   Journal of Genetics and Genomics

Improved whole-chromosome phasing for disease and population genetic studies

(2012) Olivier Delaneau et al.   NATURE METHODS

Genome-Wide Analysis of the World's Sheep Breeds Reveals High Levels of Historic Mixture and Strong Recent Selection

(2012) James W. Kijas et al.   PLOS BIOLOGY

The SNP c.1326T>G in the non-SMC condensin I complex, subunit G (NCAPG) gene encoding a p.Ile442Met variant is associated with an increase in body frame size at puberty in cattle

(2011) K. Setoguchi et al.   ANIMAL GENETICS

Association, effects and validation of polymorphisms within the NCAPG - LCORL locus located on BTA6 with feed intake, gain, meat and carcass traits in beef cattle

(2011) Amanda K Lindholm-Perry et al.   BMC GENETICS

Genome-Wide Association Study Identifies Loci for Body Composition and Structural Soundness Traits in Pigs

(2011) Bin Fan et al.   PLoS One

Using Regulatory and Epistatic Networks to Extend the Findings of a Genome Scan: Identifying the Gene Drivers of Pigmentation in Merino Sheep

(2011) Elsa García-Gámez et al.   PLoS One

Two novel mutations of SCN9A (Nav1.7) are associated with partial congenital insensitivity to pain

(2010) Roland Staudl et al.   EUROPEAN JOURNAL OF PAIN

UBQLN1 interacts with SPEM1 and participates in spermiogenesis

(2010) Jianqiang Bao et al.   MOLECULAR AND CELLULAR ENDOCRINOLOGY

Seven novelKITmutations in horses with white coat colour phenotypes

(2009) B. Haase et al.   ANIMAL GENETICS

ADD1/SREBP1c activates the PGC1-α promoter in brown adipocytes

(2009) Qin Hao et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR AND CELL BIOLOGY OF LIPIDS

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Kcne2 deletion uncovers its crucial role in thyroid hormone biosynthesis

(2009) Torsten K Roepke et al.   NATURE MEDICINE

Effect of DLK1 and RTL1 but Not MEG3 or MEG8 on Muscle Gene Expression in Callipyge Lambs

(2009) Jolena N. Fleming-Waddell et al.   PLoS One

Proteomic Analysis of Bovine Sperm YWHA Binding Partners Identify Proteins Involved in Signaling and Metabolism1

(2008) Pawan Puri et al.   BIOLOGY OF REPRODUCTION

Gene networks driving bovine milk fat synthesis during the lactation cycle

(2008) Massimo Bionaz et al.   BMC GENOMICS

Adaptations to Climate in Candidate Genes for Common Metabolic Disorders

(2008) Angela M. Hancock et al.   PLoS Genetics

Domestication and early agriculture in the Mediterranean Basin: Origins, diffusion, and impact

(2008) M. A. Zeder   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA