Kinetics of spontaneous filament nucleation via oligomers: Insights from theory and simulation
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Title
Kinetics of spontaneous filament nucleation via oligomers: Insights from theory and simulation
Authors
Keywords
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Journal
JOURNAL OF CHEMICAL PHYSICS
Volume 145, Issue 21, Pages 211926
Publisher
AIP Publishing
Online
2016-11-23
DOI
10.1063/1.4965040
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- (2010) Christian Bleiholder et al. Nature Chemistry
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