Identification of Selection Signals on the X-Chromosome in East Adriatic Sheep: A New Complementary Approach

The genomic structure of isolation across breed, country and strain for important South African and Australian sheep populations

(2022) Cornelius Nel et al.   BMC GENOMICS

Unravelling the effect of environment on the genome of Sarda breed ewes using Runs of Homozygosity

(2022) Alberto Cesarani et al.   JOURNAL OF ANIMAL BREEDING AND GENETICS

Immune Dysfunction in Mendelian Disorders of POLA1 Deficiency

(2021) Petro Starokadomskyy et al.   JOURNAL OF CLINICAL IMMUNOLOGY

Deficient spermiogenesis in mice lacking Rlim

(2021) Feng Wang et al.   eLife

Oar-miR-16b and oar-miR-27a: negatively correlated with milk yield and milk protein in sheep

(2021) Esra Duman et al.   ANIMAL BIOTECHNOLOGY

Evolution of the sheep industry and genetic research in the United States: opportunities for convergence in the twenty‐first century

(2021) J. W. Thorne et al.   ANIMAL GENETICS

Identification of a variant in NDP associated with X-linked retinal dysplasia in the English cocker spaniel dog

(2021) Hannah Joyce et al.   PLoS One

Breeding Strategies for Weather Resilience in Small Ruminants in Atlantic and Mediterranean Climates

(2021) Manuel Ramón et al.   Frontiers in Genetics

Whole-Genome Resequencing of Worldwide Wild and Domestic Sheep Elucidates Genetic Diversity, Introgression, and Agronomically Important Loci

(2021) Feng-Hua Lv et al.   MOLECULAR BIOLOGY AND EVOLUTION

Genomic scan of selective sweeps in Djallonké (West African Dwarf) sheep shed light on adaptation to harsh environments

(2020) Isabel Álvarez et al.   Scientific Reports

Footprints of adaptive evolution revealed by whole Z chromosomes haplotypes in flycatchers

(2019) Krystyna Nadachowska-Brzyska et al.   MOLECULAR ECOLOGY

Detecting selection signatures in three Iranian sheep breeds

(2019) Z. Manzari et al.   ANIMAL GENETICS

Mutations in MAGT1 lead to a glycosylation disorder with a variable phenotype

(2019) Eline Blommaert et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Detection of copy number variation and selection signatures on the X chromosome of Chinese indigenous sheep with different tail types

(2019) Caiye Zhu et al.   ASIAN-AUSTRALASIAN JOURNAL OF ANIMAL SCIENCES

Convergent evolution in human and domesticate adaptation to high-altitude environments

(2019) Kelsey E. Witt et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Cyclin B3 is dispensable for mouse spermatogenesis

(2019) Mehmet E. Karasu et al.   CHROMOSOMA

Contrasting Patterns of Genomic Diversity Reveal Accelerated Genetic Drift but Reduced Directional Selection on X-Chromosome in Wild and Domestic Sheep Species

(2018) Ze-Hui Chen et al.   Genome Biology and Evolution

Distribution of the pig gastrin-releasing peptide receptor and the effect of GRP on porcine Leydig cells

(2018) Zhiyu Ma et al.   PEPTIDES

Comparison of phasing strategies for whole human genomes

(2018) Yongwook Choi et al.   PLoS Genetics

Inferring Individual Inbreeding and Demographic History from Segments of Identity by Descent in Ficedula Flycatcher Genome Sequences

(2017) Marty Kardos et al.   GENETICS

DnaSP 6: DNA Sequence Polymorphism Analysis of Large Data Sets

(2017) Julio Rozas et al.   MOLECULAR BIOLOGY AND EVOLUTION

A model-based approach to characterize individual inbreeding at both global and local genomic scales

(2017) T. Druet et al.   MOLECULAR ECOLOGY

Inferring Individual Inbreeding and Demographic History from Segments of Identity by Descent in Ficedula Flycatcher Genome Sequences

(2017) Marty Kardos et al.   GENETICS

Genome-wide analysis reveals signatures of selection for important traits in domestic sheep from different ecoregions

(2016) Zhaohua Liu et al.   BMC GENOMICS

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Identifying molecular signatures of hypoxia adaptation from sex chromosomes: A case for Tibetan Mastiff based on analyses of X chromosome

(2016) Hong Wu et al.   Scientific Reports

Detection of Selection Signatures on the X Chromosome in Three Sheep Breeds

(2015) Caiye Zhu et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Mitogenomic Meta-Analysis Identifies Two Phases of Migration in the History of Eastern Eurasian Sheep

(2015) Feng-Hua Lv et al.   MOLECULAR BIOLOGY AND EVOLUTION

Whole-genome resequencing uncovers molecular signatures of natural and sexual selection in wild bighorn sheep

(2015) Marty Kardos et al.   MOLECULAR ECOLOGY

popart: full-feature software for haplotype network construction

(2015) Jessica W. Leigh et al.   Methods in Ecology and Evolution

Second-generation PLINK: rising to the challenge of larger and richer datasets

(2015) Christopher C Chang et al.   GigaScience

Genomic data as the “hitchhiker's guide” to cattle adaptation: tracking the milestones of past selection in the bovine genome

(2015) Yuri T. Utsunomiya et al.   Frontiers in Genetics

Inbreeding and runs of homozygosity: A possible solution to an old problem

(2014) Ino Curik et al.   Livestock Science

Mapping signatures of positive selection in the genome of livestock

(2014) Saber Qanbari et al.   Livestock Science

On Detecting Incomplete Soft or Hard Selective Sweeps Using Haplotype Structure

(2014) Anna Ferrer-Admetlla et al.   MOLECULAR BIOLOGY AND EVOLUTION

selscan: An Efficient Multithreaded Program to Perform EHH-Based Scans for Positive Selection

(2014) Z. A. Szpiech et al.   MOLECULAR BIOLOGY AND EVOLUTION

Allelic Richness following Population Founding Events – A Stochastic Modeling Framework Incorporating Gene Flow and Genetic Drift

(2014) Gili Greenbaum et al.   PLoS One

The sheep genome illuminates biology of the rumen and lipid metabolism

(2014) Y. Jiang et al.   SCIENCE

Integrating sequence and array data to create an improved 1000 Genomes Project haplotype reference panel

(2014) Olivier Delaneau et al.   Nature Communications

Effect of Artificial Selection on Runs of Homozygosity in U.S. Holstein Cattle

(2013) Eui-Soo Kim et al.   PLoS One

rehh: an R package to detect footprints of selection in genome-wide SNP data from haplotype structure

(2012) Mathieu Gautier et al.   BIOINFORMATICS

Genomic scan of selective sweeps in thin and fat tail sheep breeds for identifying of candidate regions associated with fat deposition

(2012) Mohammad Hossein Moradi et al.   BMC GENETICS

Identification of Selection Signatures in Cattle Breeds Selected for Dairy Production

(2010) A. Stella et al.   GENETICS

Genomic and geographic distribution of SNP-defined runs of homozygosity in Europeans

(2010) Michael Nothnagel et al.   HUMAN MOLECULAR GENETICS

Comparison of steroid hormone concentrations and mRNA levels of steroid receptor genes in longissimus dorsi muscle and subcutaneous fat between bulls and steers and association with carcass traits in Korean cattle

(2010) B. Choi et al.   Livestock Science

Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows

(2010) LAURENT EXCOFFIER et al.   Molecular Ecology Resources

Genetics and breeding of sheep in Brazil

(2010) Concepta McManus et al.   REVISTA BRASILEIRA DE ZOOTECNIA-BRAZILIAN JOURNAL OF ANIMAL SCIENCE

A Simple Genetic Architecture Underlies Morphological Variation in Dogs

(2010) Adam R. Boyko et al.   PLOS BIOLOGY

Preliminary evidence of association between EFHC2, a gene implicated in fear recognition, and harm avoidance

(2009) Carolina Blaya et al.   NEUROSCIENCE LETTERS

A multiple testing correction method for genetic association studies using correlated single nucleotide polymorphisms

(2008) Xiaoyi Gao et al.   GENETIC EPIDEMIOLOGY

Domestication and early agriculture in the Mediterranean Basin: Origins, diffusion, and impact

(2008) M. A. Zeder   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA