Placenta and fetal brain share a neurodevelopmental disorder DNA methylation profile in a mouse model of prenatal PCB exposure

Down-regulation of LncRNA 2900052N01Rik inhibits LPS-induced B cell function in vitro

(2021) Faming Wang et al.   CELLULAR IMMUNOLOGY

Annotation of chromatin states in 66 complete mouse epigenomes during development

(2021) Arjan van der Velde et al.   Communications Biology

Sex and Genotype Modulate the Dendritic Effects of Developmental Exposure to a Human-Relevant Polychlorinated Biphenyls Mixture in the Juvenile Mouse

(2021) Kimberly P. Keil Stietz et al.   Frontiers in Neuroscience

Developmental Exposure to a Human-Relevant Polychlorinated Biphenyl Mixture Causes Behavioral Phenotypes That Vary by Sex and Genotype in Juvenile Mice Expressing Human Mutations That Modulate Neuronal Calcium

(2021) Sunjay Sethi et al.   Frontiers in Neuroscience

Evidence Implicating Non-Dioxin-Like Congeners as the Key Mediators of Polychlorinated Biphenyl (PCB) Developmental Neurotoxicity

(2020) Carolyn Klocke et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Chromatin interaction analyses elucidate the roles of PRC2-bound silencers in mouse development

(2020) Chew Yee Ngan et al.   NATURE GENETICS

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(2020) Masa-aki Nakaya et al.   PLoS One

Human CYP2E1-activated mutagenicity of dioxin-like PCBs 105 and 118—Experimental data consistent with molecular docking results

(2020) Keqi Hu et al.   TOXICOLOGY

Placenta Disrupted: Endocrine Disrupting Chemicals and Pregnancy

(2020) Jeremy Gingrich et al.   TRENDS IN ENDOCRINOLOGY AND METABOLISM

Epigenome environment interactions accelerate epigenomic aging and unlock metabolically restricted epigenetic reprogramming in adulthood

(2020) Lindsey S. Treviño et al.   Nature Communications

dream: Powerful differential expression analysis for repeated measures designs

(2020) Gabriel E Hoffman et al.   BIOINFORMATICS

Genome-wide DNA methylation differences and polychlorinated biphenyl (PCB) exposure in a US population

(2020) Sarah W. Curtis et al.   Epigenetics

Concentrations of persistent organic pollutants in maternal plasma and epigenome-wide placental DNA methylation

(2020) Marion Ouidir et al.   Clinical Epigenetics

Polychlorinated Biphenyls (PCBs): Risk Factors for Autism Spectrum Disorder?

(2020) Harmanpreet Kaur Panesar et al.   Toxics

Comparative Analyses of the 12 Most Abundant PCB Congeners Detected in Human Maternal Serum for Activity at the Thyroid Hormone Receptor and Ryanodine Receptor

(2019) Sunjay Sethi et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Placental DNA methylation levels at CYP2E1 and IRS2 are associated with child outcome in a prospective autism study

(2019) Yihui Zhu et al.   HUMAN MOLECULAR GENETICS

Epigenomic Convergence of Neural-Immune Risk Factors in Neurodevelopmental Disorder Cortex

(2019) A Vogel Ciernia et al.   CEREBRAL CORTEX

An Altered DNA Methylation Status in the Human Umbilical Cord Is Correlated with Maternal Exposure to Polychlorinated Biphenyls

(2019) Akifumi Eguchi et al.   International Journal of Environmental Research and Public Health

The developmental neurotoxicity of legacy vs. contemporary polychlorinated biphenyls (PCBs): similarities and differences

(2019) Carolyn Klocke et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Polychlorinated biphenyl exposure and DNA methylation in the Anniston Community Health Survey

(2019) Gary S. Pittman et al.   Epigenetics

Detection and accurate false discovery rate control of differentially methylated regions from whole genome bisulfite sequencing

(2018) Keegan Korthauer et al.   BIOSTATISTICS

Featured structure-activity relationships for some tri- and tetrachlorobiphenyls in human CYP2E1-activated mutagenicity — Impact of the extent of ortho- chlorination

(2018) Yuting Chen et al.   CHEMOSPHERE

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(2018) Zachary Steinhart et al.   DEVELOPMENT

The distribution and trends of persistent organic pollutants and mercury in marine mammals from Canada's Eastern Arctic

(2018) Tanya M. Brown et al.   SCIENCE OF THE TOTAL ENVIRONMENT

PCB 95 promotes dendritic growth in primary rat hippocampal neurons via mTOR-dependent mechanisms

(2018) Kimberly P. Keil et al.   ARCHIVES OF TOXICOLOGY

3,3ʹ-Dichlorobiphenyl (PCB 11) promotes dendritic arborization in primary rat cortical neurons via a CREB-dependent mechanism

(2018) Sunjay Sethi et al.   ARCHIVES OF TOXICOLOGY

HUMAN CYP2A6, CYP2B6 AND CYP2E1 ATROPSELECTIVELY METABOLIZE POLYCHLORINATED BIPHENYLS TO HYDROXYLATED METABOLITES

(2018) Eric Uwimana et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Sex-Dependent Effects of 2,2′,3,5′,6-Pentachlorobiphenyl on Dendritic Arborization of Primary Mouse Neurons

(2018) Kimberly P Keil et al.   TOXICOLOGICAL SCIENCES

Polychlorinated Biphenyls and Polychlorinated Dioxins–Furans in Lake Trout and Whitefish Composite Samples from Commercial Fisheries in Lakes Erie, Huron, and Superior

(2017) Dorothea F. K. Rawn et al.   JOURNAL OF FOOD PROTECTION

Genetic differences in the aryl hydrocarbon receptor and CYP1A2 affect sensitivity to developmental polychlorinated biphenyl exposure in mice: relevance to studies of human neurological disorders

(2017) Kelsey Klinefelter et al.   MAMMALIAN GENOME

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(2017) Seung-Hyeon Seok et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

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(2017) Yimeng Yin et al.   SCIENCE

Detection of 3,3′-Dichlorobiphenyl in Human Maternal Plasma and Its Effects on Axonal and Dendritic Growth in Primary Rat Neurons

(2017) Sunjay Sethi et al.   TOXICOLOGICAL SCIENCES

Polychlorinated biphenyls target Notch/Dll and VEGF R2 in the mouse placenta and human trophoblast cell lines for their anti-angiogenic effects

(2017) Satyan Kalkunte et al.   Scientific Reports

Quantification of Polychlorinated Biphenyls and Polybrominated Diphenyl Ethers in Commercial Cows’ Milk from California by Gas Chromatography–Triple Quadruple Mass Spectrometry

(2017) Xiaopeng Chen et al.   PLoS One

Potent mutagenicity of some non-planar tri- and tetrachlorinated biphenyls in mammalian cells, human CYP2E1 being a major activating enzyme

(2016) Yungang Liu et al.   ARCHIVES OF TOXICOLOGY

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(2016) Philip Ewels et al.   BIOINFORMATICS

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(2016) Zuguang Gu et al.   BIOINFORMATICS

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(2016) Heike Blockus et al.   DEVELOPMENT

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(2016) Maxim V. Kuleshov et al.   NUCLEIC ACIDS RESEARCH

Distinct and shared functions of ALS-associated proteins TDP-43, FUS and TAF15 revealed by multisystem analyses

(2016) Katannya Kapeli et al.   Nature Communications

Untangling the brain’s neuroinflammatory and neurodegenerative transcriptional responses

(2016) Karpagam Srinivasan et al.   Nature Communications

Human placental multipotent mesenchymal stromal cells modulate placenta angiogenesis through Slit2-Robo signaling

(2016) Cheng-Yi Chen et al.   Cell Adhesion & Migration

Cumulative Impact of Polychlorinated Biphenyl and Large Chromosomal Duplications on DNA Methylation, Chromatin, and Expression of Autism Candidate Genes

(2016) Keith W. Dunaway et al.   Cell Reports

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(2015) Nathan C. Sheffield et al.   BIOINFORMATICS

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(2015) Guangchuang Yu et al.   BIOINFORMATICS

Dose- and time-dependent expression of aryl hydrocarbon receptor (AhR) and aryl hydrocarbon receptor nuclear translocator (ARNT) in PCB-, B[a]P-, and TBT-exposed intertidal copepod Tigriopus japonicus

(2015) Bo-Mi Kim et al.   CHEMOSPHERE

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(2015) Fabian A. Grimm et al.   CRITICAL REVIEWS IN TOXICOLOGY

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(2015) Harrison W. Gabel et al.   NATURE

Tet3 regulates synaptic transmission and homeostatic plasticity via DNA oxidation and repair

(2015) Huimei Yu et al.   NATURE NEUROSCIENCE

MeCP2 binds to non-CG methylated DNA as neurons mature, influencing transcription and the timing of onset for Rett syndrome

(2015) Lin Chen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Early Developmental and Evolutionary Origins of Gene Body DNA Methylation Patterns in Mammalian Placentas

(2015) Diane I. Schroeder et al.   PLoS Genetics

Gene Body Methylation Can Alter Gene Expression and Is a Therapeutic Target in Cancer

(2014) Xiaojing Yang et al.   CANCER CELL

Role of AHR, AHRR and ARNT in response to dioxin-like PCBs in Spaurus aurata

(2014) Margherita Calò et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

UpSet: Visualization of Intersecting Sets

(2014) Alexander Lex et al.   IEEE TRANSACTIONS ON VISUALIZATION AND COMPUTER GRAPHICS

The Environmental Neurotoxicant PCB 95 Promotes Synaptogenesis via Ryanodine Receptor-Dependent miR132 Upregulation

(2014) Adam Lesiak et al.   JOURNAL OF NEUROSCIENCE

PCB 136 Atropselectively Alters Morphometric and Functional Parameters of Neuronal Connectivity in Cultured Rat Hippocampal Neurons via Ryanodine Receptor-Dependent Mechanisms

(2014) Dongren Yang et al.   TOXICOLOGICAL SCIENCES

voom: precision weights unlock linear model analysis tools for RNA-seq read counts

(2014) Charity W Law et al.   GENOME BIOLOGY

GAT: a simulation framework for testing the association of genomic intervals

(2013) A. Heger et al.   BIOINFORMATICS

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(2013) Edward Y Chen et al.   BMC BIOINFORMATICS

Wnk kinases are positive regulators of canonical Wnt/β-catenin signalling

(2013) Ekatherina Serysheva et al.   EMBO REPORTS

Nonlegacy PCBs: Pigment Manufacturing By-Products Get a Second Look

(2013) Elizabeth Grossman   ENVIRONMENTAL HEALTH PERSPECTIVES

Polybrominated Diphenyl Ethers, Polychlorinated Biphenyls, and Persistent Pesticides in Serum from the National Health and Nutrition Examination Survey: 2003–2008

(2013) Andreas Sjödin et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Topoisomerases facilitate transcription of long genes linked to autism

(2013) Ian F. King et al.   NATURE

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(2013) D. I. Schroeder et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

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(2013) Janine M. LaSalle et al.   TRENDS IN NEUROSCIENCES

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(2012) Alexander Dobin et al.   BIOINFORMATICS

Human Placental Expression of SLIT/ROBO Signaling Cues: Effects of Preeclampsia and Hypoxia1

(2012) Wu-Xiang Liao et al.   BIOLOGY OF REPRODUCTION

Daam2 Is Required for Dorsal Patterning via Modulation of Canonical Wnt Signaling in the Developing Spinal Cord

(2012) Hyun Kyoung Lee et al.   DEVELOPMENTAL CELL

Levels of select PCB and PBDE congeners in human postmortem brain reveal possible environmental involvement in 15q11-q13 duplication autism spectrum disorder

(2012) Michelle M. Mitchell et al.   ENVIRONMENTAL AND MOLECULAR MUTAGENESIS

PCB-95 Modulates the Calcium-Dependent Signaling Pathway Responsible for Activity-Dependent Dendritic Growth

(2012) Gary A. Wayman et al.   ENVIRONMENTAL HEALTH PERSPECTIVES

PCB-95 Promotes Dendritic Growth via Ryanodine Receptor–Dependent Mechanisms

(2012) Gary A. Wayman et al.   ENVIRONMENTAL HEALTH PERSPECTIVES

Indigenous Peoples of North America: Environmental Exposures and Reproductive Justice

(2012) Elizabeth Hoover et al.   ENVIRONMENTAL HEALTH PERSPECTIVES

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(2012) Ben Langmead et al.   NATURE METHODS

BSmooth: from whole genome bisulfite sequencing reads to differentially methylated regions

(2012) Kasper D Hansen et al.   GENOME BIOLOGY

Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications

(2011) Felix Krueger et al.   BIOINFORMATICS

Individual Polychlorinated Biphenyl (PCB) Congeners Produce Tissue- and Gene-Specific Effects on Thyroid Hormone Signaling during Development

(2011) Stefanie Giera et al.   ENDOCRINOLOGY

Spatial distribution of chlordanes and PCB congeners in soil in Cedar Rapids, Iowa, USA

(2011) Andres Martinez et al.   ENVIRONMENTAL POLLUTION

Large-scale methylation domains mark a functional subset of neuronally expressed genes

(2011) D. I. Schroeder et al.   GENOME RESEARCH

Studying placental transfer of highly purified non-dioxin-like PCBs in two models of the placental barrier

(2011) S. Correia Carreira et al.   PLACENTA

Motif Enrichment Analysis: a unified framework and an evaluation on ChIP data

(2010) Robert C McLeay et al.   BMC BIOINFORMATICS

Polychlorinated Biphenyls PCB 52, PCB 180, and PCB 138 Impair the Glutamate−Nitric Oxide−cGMP Pathway in Cerebellar Neurons in Culture by Different Mechanisms

(2010) Marta Llansola et al.   CHEMICAL RESEARCH IN TOXICOLOGY

Simple Combinations of Lineage-Determining Transcription Factors Prime cis-Regulatory Elements Required for Macrophage and B Cell Identities

(2010) Sven Heinz et al.   MOLECULAR CELL

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Inadvertent Polychlorinated Biphenyls in Commercial Paint Pigments†

(2009) Dingfei Hu et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Midline governs axon pathfinding by coordinating expression of two major guidance systems

(2009) Q.-X. Liu et al.   GENES & DEVELOPMENT

Polychlorinated Biphenyls PCB 153 and PCB 126 Impair the Glutamate–Nitric Oxide–cGMP Pathway in Cerebellar Neurons in Culture by Different Mechanisms

(2009) Marta Llansola et al.   NEUROTOXICITY RESEARCH

MEME SUITE: tools for motif discovery and searching

(2009) T. L. Bailey et al.   NUCLEIC ACIDS RESEARCH

Minding the calcium store: Ryanodine receptor activation as a convergent mechanism of PCB toxicity

(2009) Isaac N. Pessah et al.   PHARMACOLOGY & THERAPEUTICS

Discovery of Non-Aroclor PCB (3,3′-Dichlorobiphenyl) in Chicago Air

(2008) Dingfei Hu et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY