CRISPR/dCas9-RpoD-Mediated Simultaneous Transcriptional Activation and Repression in Shewanella oneidensis MR-1

Enhanced Bioreduction of Radionuclides by Driving Microbial Extracellular Electron Pumping with an Engineered CRISPR Platform

(2021) Yang-Yang Fan et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Regulatory function of sigma factors RpoS/RpoN in adaptation and spoilage potential of Shewanella baltica

(2021) Lifang Feng et al.   FOOD MICROBIOLOGY

Electromicrobiology: the ecophysiology of phylogenetically diverse electroactive microorganisms

(2021) Derek R. Lovley et al.   NATURE REVIEWS MICROBIOLOGY

Engineering Wired Life: Synthetic Biology for Electroactive Bacteria

(2021) Lina J. Bird et al.   ACS Synthetic Biology

Temperature-Dependent Influence of FliA Overexpression on PHL628 E. coli Biofilm Growth and Composition

(2021) Luke D. Buck et al.   Frontiers in Cellular and Infection Microbiology

Promoting bidirectional extracellular electron transfer of Shewanella oneidensis MR‐1 for hexavalent chromium reduction via elevating intracellular cAMP level

(2020) Zhou‐Hua Cheng et al.   BIOTECHNOLOGY AND BIOENGINEERING

Developing a base‐editing system to expand the carbon source utilization spectra of Shewanella oneidensis MR‐1 for enhanced pollutant degradation

(2020) Lei Cheng et al.   BIOTECHNOLOGY AND BIOENGINEERING

Effective CRISPRa-mediated control of gene expression in bacteria must overcome strict target site requirements

(2020) Jason Fontana et al.   Nature Communications

Programmable CRISPR‐Cas transcriptional activation in bacteria

(2020) Hsing‐I Ho et al.   Molecular Systems Biology

Developing a population-state decision system for intelligently reprogramming extracellular electron transfer in Shewanella oneidensis

(2020) Feng-He Li et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Expanded roles of pyruvate-sensing PdhR in transcription regulation of the Escherichia coli K-12 genome: fatty acid catabolism and cell motility

(2020) Takumi Anzai et al.   Microbial Genomics

Shewanella biofilm development and engineering for environmental and bioenergy applications

(2020) Manisha Mukherjee et al.   CURRENT OPINION IN CHEMICAL BIOLOGY

Rapid and highly efficient genomic engineering with a novel iEditing device for programming versatile extracellular electron transfer of electroactive bacteria

(2020) Yang‐Yang Fan et al.   ENVIRONMENTAL MICROBIOLOGY

Engineering Microbial Consortia for High-Performance Cellulosic Hydrolyzates-Fed Microbial Fuel Cells

(2019) Feng Li et al.   Frontiers in Microbiology

Electroactive microorganisms in bioelectrochemical systems

(2019) Bruce E. Logan et al.   NATURE REVIEWS MICROBIOLOGY

Inorganic polyphosphate accumulation in Escherichia coli is regulated by DksA but not by (p)ppGpp

(2019) Michael J. Gray   JOURNAL OF BACTERIOLOGY

Differential modulation of energy landscapes of cyclic AMP receptor protein (CRP) as a regulatory mechanism for class II CRP-dependent promoters

(2019) Wilfredo Evangelista et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Engineered CRISPRa enables programmable eukaryote-like gene activation in bacteria

(2019) Yang Liu et al.   Nature Communications

OxyR-controlled surface polysaccharide production and biofilm formation in Acinetobacter oleivorans DR1

(2019) Bora Shin et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Bacterial Vesicles Mediate Extracellular Electron Transfer

(2019) Xing Liu et al.   Environmental Science & Technology Letters

Shewanella putrefaciens CN32 outer membrane cytochromes MtrC and UndA reduce electron shuttles to produce electricity in microbial fuel cells

(2018) Xian Wu et al.   ENZYME AND MICROBIAL TECHNOLOGY

Perturbation of the metabolic network in Salmonella enterica reveals cross-talk between coenzyme A and thiamine pathways

(2018) Dustin C. Ernst et al.   PLoS One

Synthetic CRISPR-Cas gene activators for transcriptional reprogramming in bacteria

(2018) Chen Dong et al.   Nature Communications

CRISPR-Cas guides the future of genetic engineering

(2018) Gavin J. Knott et al.   SCIENCE

On-going applications of Shewanella species in microbial electrochemical system for bioenergy, bioremediation and biosensing

(2018) Long Zou et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

Enhancing Extracellular Electron Transfer of Shewanella oneidensis MR-1 through Coupling Improved Flavin Synthesis and Metal-Reducing Conduit for Pollutant Degradation

(2017) Di Min et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Regulation of antimicrobial resistance by extracytoplasmic function (ECF) sigma factors

(2017) Emily C. Woods et al.   MICROBES AND INFECTION

Inducible and multiplex gene regulation using CRISPR–Cpf1-based transcription factors

(2017) Y Esther Tak et al.   NATURE METHODS

CRISPRi–sRNA: Transcriptional–Translational Regulation of Extracellular Electron Transfer in Shewanella oneidensis

(2017) Yingxiu Cao et al.   ACS Synthetic Biology

Characterization of C-terminal structure of MinC and its implication in evolution of bacterial cell division

(2017) Shaoyuan Yang et al.   Scientific Reports

Extracellular electron transfer mechanisms between microorganisms and minerals

(2016) Liang Shi et al.   NATURE REVIEWS MICROBIOLOGY

CymA and Exogenous Flavins Improve Extracellular Electron Transfer and Couple It to Cell Growth in Mtr-Expressing Escherichia coli

(2016) Heather M. Jensen et al.   ACS Synthetic Biology

Programming the quorum sensing-based AND gate in Shewanella oneidensis for logic gated-microbial fuel cells

(2015) Yidan Hu et al.   CHEMICAL COMMUNICATIONS

Enhancing Bidirectional Electron Transfer of Shewanella oneidensis by a Synthetic Flavin Pathway

(2015) Yun Yang et al.   ACS Synthetic Biology

Identification and characterization of a HEPN-MNT family type II toxin-antitoxin inShewanella oneidensis

(2015) Jianyun Yao et al.   Microbial Biotechnology

The Whole Set of Constitutive Promoters Recognized by RNA Polymerase RpoD Holoenzyme of Escherichia coli

(2014) Tomohiro Shimada et al.   PLoS One

Disruption of Putrescine Biosynthesis in Shewanella oneidensis Enhances Biofilm Cohesiveness and Performance in Cr(VI) Immobilization

(2013) Yuanzhao Ding et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Chromosome segregation by the Escherichia coli Min system

(2013) B. Di Ventura et al.   Molecular Systems Biology

Design and use of synthetic regulatory small RNAs to control gene expression in Escherichia coli

(2013) Seung Min Yoo et al.   Nature Protocols

CRISPR interference (CRISPRi) for sequence-specific control of gene expression

(2013) Matthew H Larson et al.   Nature Protocols

Programmable repression and activation of bacterial gene expression using an engineered CRISPR-Cas system

(2013) David Bikard et al.   NUCLEIC ACIDS RESEARCH

Effect of overexpressing nhaA and nhaR on sodium tolerance and lactate production in Escherichia coli

(2013) Xianghao Wu et al.   Journal of Biological Engineering

Control of Proteobacterial Central Carbon Metabolism by the HexR Transcriptional Regulator

(2011) Semen A. Leyn et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Disruption of the Putative Cell Surface Polysaccharide Biosynthesis Gene SO3177 in Shewanella oneidensis MR-1 Enhances Adhesion to Electrodes and Current Generation in Microbial Fuel Cells

(2010) A. Kouzuma et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Identification of an Extracellular Polysaccharide Network Essential for Cytochrome Anchoring and Biofilm Formation in Geobacter sulfurreducens

(2010) J. B. Rollefson et al.   JOURNAL OF BACTERIOLOGY

Involvement of Shewanella oneidensis MR-1 LuxS in Biofilm Development and Sulfur Metabolism

(2009) D. R. Learman et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Periplasmic Electron Transfer via the c-Type Cytochromes MtrA and FccA of Shewanella oneidensis MR-1

(2009) B. Schuetz et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The third pillar of bacterial signal transduction: classification of the extracytoplasmic function (ECF) σ factor protein family

(2009) Anna Staroń et al.   MOLECULAR MICROBIOLOGY

Direct MinE-membrane interaction contributes to the proper localization of MinDE inE. coli

(2009) Cheng-Wei Hsieh et al.   MOLECULAR MICROBIOLOGY

Exoelectrogenic bacteria that power microbial fuel cells

(2009) Bruce E. Logan   NATURE REVIEWS MICROBIOLOGY

Modelling of processes governing subcellular localisation of MinD in Escherichia coli

(2008) X. Xu et al.   IET Systems Biology

A One Pot, One Step, Precision Cloning Method with High Throughput Capability

(2008) Carola Engler et al.   PLoS One