Developing a base‐editing system to expand the carbon source utilization spectra of Shewanella oneidensis MR‐1 for enhanced pollutant degradation

Promoting bidirectional extracellular electron transfer of Shewanella oneidensis MR‐1 for hexavalent chromium reduction via elevating intracellular cAMP level

(2020) Zhou‐Hua Cheng et al.   BIOTECHNOLOGY AND BIOENGINEERING

Continuous evolution of SpCas9 variants compatible with non-G PAMs

(2020) Shannon M. Miller et al.   NATURE BIOTECHNOLOGY

Unconstrained genome targeting with near-PAMless engineered CRISPR-Cas9 variants

(2020) Russell T. Walton et al.   SCIENCE

Circularly permuted and PAM-modified Cas9 variants broaden the targeting scope of base editors

(2019) Tony P. Huang et al.   NATURE BIOTECHNOLOGY

Continuous evolution of base editors with expanded target compatibility and improved activity

(2019) Benjamin W. Thuronyi et al.   NATURE BIOTECHNOLOGY

Highly efficient DSB-free base editing for streptomycetes with CRISPR-BEST

(2019) Yaojun Tong et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Sensing and Approaching Toxic Arsenate by Shewanella putrefaciens CN-32

(2019) Lei Cheng et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Search-and-replace genome editing without double-strand breaks or donor DNA

(2019) Andrew V. Anzalone et al.   NATURE

MACBETH: Multiplex automated Corynebacterium glutamicum base editing method

(2018) Yu Wang et al.   METABOLIC ENGINEERING

Multiplexed CRISPR-Cpf1-Mediated Genome Editing in Clostridium difficile toward the Understanding of Pathogenesis of C. difficile Infection

(2018) Wei Hong et al.   ACS Synthetic Biology

Enhancing Extracellular Electron Transfer of Shewanella oneidensis MR-1 through Coupling Improved Flavin Synthesis and Metal-Reducing Conduit for Pollutant Degradation

(2017) Di Min et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Growth Trade-Offs Accompany the Emergence of Glycolytic Metabolism in Shewanella oneidensis MR-1

(2017) Lon M. Chubiz et al.   JOURNAL OF BACTERIOLOGY

Increasing the genome-targeting scope and precision of base editing with engineered Cas9-cytidine deaminase fusions

(2017) Y Bill Kim et al.   NATURE BIOTECHNOLOGY

Rapid Release of Arsenite from Roxarsone Bioreduction by Exoelectrogenic Bacteria

(2017) Jun-Cheng Han et al.   Environmental Science & Technology Letters

Activation of an Otherwise Silent Xylose Metabolic Pathway in Shewanella oneidensis

(2016) Ramanan Sekar et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

CRISPR technologies for bacterial systems: Current achievements and future directions

(2016) Kyeong Rok Choi et al.   BIOTECHNOLOGY ADVANCES

Anaerobic reduction of 2,6-dinitrotoluene byShewanella oneidensisMR-1: Roles of Mtr respiratory pathway and NfnB

(2016) Dong-Feng Liu et al.   BIOTECHNOLOGY AND BIOENGINEERING

PAM-Dependent Target DNA Recognition and Cleavage by C2c1 CRISPR-Cas Endonuclease

(2016) Hui Yang et al.   CELL

CRISPR/Cas9 advances engineering of microbial cell factories

(2016) Tadas Jakočiūnas et al.   METABOLIC ENGINEERING

New CRISPR–Cas systems from uncultivated microbes

(2016) David Burstein et al.   NATURE

Programmable editing of a target base in genomic DNA without double-stranded DNA cleavage

(2016) Alexis C. Komor et al.   NATURE

Applications of CRISPR technologies in research and beyond

(2016) Rodolphe Barrangou et al.   NATURE BIOTECHNOLOGY

Current and future prospects for CRISPR-based tools in bacteria

(2015) Michelle L. Luo et al.   BIOTECHNOLOGY AND BIOENGINEERING

Transforming exoelectrogens for biotechnology using synthetic biology

(2015) Michaela A. TerAvest et al.   BIOTECHNOLOGY AND BIOENGINEERING

Cpf1 Is a Single RNA-Guided Endonuclease of a Class 2 CRISPR-Cas System

(2015) Bernd Zetsche et al.   CELL

Engineering Electrode-Attached Microbial Consortia for High-Performance Xylose-Fed Microbial Fuel Cell

(2015) Yun Yang et al.   ACS Catalysis

Metabolically engineered glucose-utilizing Shewanella strains under anaerobic conditions

(2013) Donggeon Choi et al.   BIORESOURCE TECHNOLOGY

Towards sustainable wastewater treatment by using microbial fuel cells-centered technologies

(2013) Wen-Wei Li et al.   Energy & Environmental Science

Expression of blaA Underlies Unexpected Ampicillin-Induced Cell Lysis of Shewanella oneidensis

(2013) Jianhua Yin et al.   PLoS One

Anaerobic biodecolorization mechanism of methyl orange by Shewanella oneidensis MR-1

(2011) Pei-Jie Cai et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Degradation of the synthetic dye amaranth by the fungus Bjerkandera adusta Dec 1: inference of the degradation pathway from an analysis of decolorized products

(2011) Nichina Gomi et al.   BIODEGRADATION

High frequency of glucose-utilizing mutants in Shewanella oneidensis MR-1

(2011) Erinn C. Howard et al.   FEMS MICROBIOLOGY LETTERS

Genomic encyclopedia of sugar utilization pathways in the Shewanella genus

(2010) Dmitry A Rodionov et al.   BMC GENOMICS

Enabling Unbalanced Fermentations by Using Engineered Electrode-Interfaced Bacteria

(2010) J. M. Flynn et al.   mBio

Versatile Dual-Technology System for Markerless Allele Replacement in Burkholderia pseudomallei

(2009) C. M. Lopez et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Enzymatic assembly of DNA molecules up to several hundred kilobases

(2009) Daniel G Gibson et al.   NATURE METHODS

Exoelectrogenic bacteria that power microbial fuel cells

(2009) Bruce E. Logan   NATURE REVIEWS MICROBIOLOGY

Genomic reconstruction ofShewanella oneidensisMR-1 metabolism reveals a previously uncharacterized machinery for lactate utilization

(2009) Grigory E. Pinchuk et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Opportunities for renewable bioenergy using microorganisms

(2008) Bruce E. Rittmann   BIOTECHNOLOGY AND BIOENGINEERING

Towards environmental systems biology of Shewanella

(2008) James K. Fredrickson et al.   NATURE REVIEWS MICROBIOLOGY

A One Pot, One Step, Precision Cloning Method with High Throughput Capability

(2008) Carola Engler et al.   PLoS One