The Whole Set of Constitutive Promoters Recognized by RNA Polymerase RpoD Holoenzyme of Escherichia coli

Structural Insights into the Regulation of Foreign Genes inSalmonellaby the Hha/H-NS Complex

(2013) Sabrina S. Ali et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Screening of promoter-specific transcription factors: multiple regulators for the sdiA gene involved in cell division control and quorum sensing

(2013) K. Shimada et al.   MICROBIOLOGY-SGM

Cooperativity and interaction energy threshold effects in recognition of the −10 promoter element by bacterial RNA polymerase

(2013) Vladimir Mekler et al.   NUCLEIC ACIDS RESEARCH

Promoters of Escherichia coli versus Promoter Islands: Function and Structure Comparison

(2013) Valeriy V. Panyukov et al.   PLoS One

RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more

(2012) Heladia Salgado et al.   NUCLEIC ACIDS RESEARCH

Genome-Wide Identification of Transcription Start Sites Yields a Novel Thermosensing RNA and New Cyclic AMP Receptor Protein-Regulated Genes in Escherichia coli

(2011) R. Raghavan et al.   JOURNAL OF BACTERIOLOGY

Mechanism of Bacterial Transcription Initiation: RNA Polymerase - Promoter Binding, Isomerization to Initiation-Competent Open Complexes, and Initiation of RNA Synthesis

(2011) Ruth M. Saecker et al.   JOURNAL OF MOLECULAR BIOLOGY

Novel roles of LeuO in transcription regulation of E. coli genome: antagonistic interplay with the universal silencer H-NS

(2011) Tomohiro Shimada et al.   MOLECULAR MICROBIOLOGY

Escherichia coli σ 70 senses sequence and conformation of the promoter spacer region

(2011) Shivani S. Singh et al.   NUCLEIC ACIDS RESEARCH

Novel Roles of cAMP Receptor Protein (CRP) in Regulation of Transport and Metabolism of Carbon Sources

(2011) Tomohiro Shimada et al.   PLoS One

Structural basis for recognition of AT-rich DNA by unrelated xenogeneic silencing proteins

(2011) B. R. G. Gordon et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Regulation of the Escherichia coli csgD promoter: interplay between five transcription factors

(2010) H. Ogasawara et al.   MICROBIOLOGY-SGM

A novel nucleoid protein of Escherichia coli induced under anaerobiotic growth conditions

(2010) Jun Teramoto et al.   NUCLEIC ACIDS RESEARCH

EcoCyc: a comprehensive database of Escherichia coli biology

(2010) I. M. Keseler et al.   NUCLEIC ACIDS RESEARCH

Bacterial Small RNA Regulators: Versatile Roles and Rapidly Evolving Variations

(2010) S. Gottesman et al.   Cold Spring Harbor Perspectives in Biology

Regulator Trafficking on Bacterial Transcription Units In Vivo

(2009) Rachel A. Mooney et al.   MOLECULAR CELL

The transcription unit architecture of the Escherichia coli genome

(2009) Byung-Kwan Cho et al.   NATURE BIOTECHNOLOGY

Gains and unexpected lessons from genome-scale promoter mapping

(2009) K. S. Shavkunov et al.   NUCLEIC ACIDS RESEARCH

The Escherichia coli RutR transcription factor binds at targets within genes as well as intergenic regions

(2008) Tomohiro Shimada et al.   NUCLEIC ACIDS RESEARCH