Detection and population genomics of sea turtle species via noninvasive environmental DNA analysis of nesting beach sand tracks and oceanic water

Improving the reliability of eDNA data interpretation

(2021) Alfred Burian et al.   Molecular Ecology Resources

The Concurrent Detection of Chelonid Alphaherpesvirus 5 and Chelonia mydas Papillomavirus 1 in Tumoured and Non-Tumoured Green Turtles

(2021) Narges Mashkour et al.   Animals

The Effect of Activity, Energy Use, and Species Identity on Environmental DNA Shedding of Freshwater Fish

(2021) Bettina Thalinger et al.   Frontiers in Ecology and Evolution

Molecular characterization of a marine turtle tumor epizootic, profiling external, internal and postsurgical regrowth tumors

(2021) Kelsey Yetsko et al.   Communications Biology

The Promise and Pitfalls of Environmental DNA and RNA Approaches for the Monitoring of Human and Animal Pathogens from Aquatic Sources

(2021) Jessica A Farrell et al.   BIOSCIENCE

Environmental DNA monitoring of oncogenic viral shedding and genomic profiling of sea turtle fibropapillomatosis reveals unusual viral dynamics

(2021) Jessica A. Farrell et al.   Communications Biology

Individual haplotyping of whale sharks from seawater environmental DNA

(2021) Laurence Dugal et al.   Molecular Ecology Resources

Environmental DNA and environmental RNA: Current and prospective applications for biological monitoring

(2021) Heather D. Veilleux et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Evolutionary Comparisons of Chelonid Alphaherpesvirus 5 (ChHV5) Genomes from Fibropapillomatosis-Afflicted Green (Chelonia mydas), Olive Ridley (Lepidochelys olivacea) and Kemp’s Ridley (Lepidochelys kempii) Sea Turtles

(2021) Liam Whitmore et al.   Animals

Pathogens and disease vectors/hosts monitoring in aquatic environments: Potential of using eDNA/eRNA based approach

(2021) Mohan Amarasiri et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Estimates of marine turtle nesting populations in the south-west Indian Ocean indicate the importance of the Chagos Archipelago

(2020) Jeanne A. Mortimer et al.   ORYX

Molecular evidence for horizontal transmission of chelonid alphaherpesvirus 5 at green turtle (Chelonia mydas) foraging grounds in Queensland, Australia

(2020) K. Jones et al.   PLoS One

Enhancing tropical conservation and ecology research with aquatic environmental DNA methods: an introduction for non-environmental DNA specialists

(2020) R. Huerlimann et al.   ANIMAL CONSERVATION

Applications of environmental DNA (eDNA) in ecology and conservation: opportunities, challenges and prospects

(2020) Kingsly C. Beng et al.   BIODIVERSITY AND CONSERVATION

Mercury and Organochlorine Pesticides in Tissues of Loggerhead Sea Turtles (Caretta caretta) Stranded Along the Southwestern Mediterranean Coastline (Andalusia, Spain)

(2020) Pilar Gómez-Ramírez et al.   BULLETIN OF ENVIRONMENTAL CONTAMINATION AND TOXICOLOGY

Fishing for mammals: Landscape‐level monitoring of terrestrial and semi‐aquatic communities using eDNA from riverine systems

(2020) Naiara Guimarães Sales et al.   JOURNAL OF APPLIED ECOLOGY

Green turtle herbivory and its effects on the warm, temperate seagrass meadows of St. Joseph Bay, Florida (USA)

(2020) AR Rodriguez et al.   MARINE ECOLOGY PROGRESS SERIES

Identifying patterns in foraging-area origins in breeding aggregations of migratory species: Loggerhead turtles in the Northwest Atlantic

(2020) Joseph B. Pfaller et al.   PLoS One

Determining critical inter-nesting, migratory, and foraging habitats for the conservation of East Atlantic green turtles (Chelonia mydas)

(2020) Emily K. Mettler et al.   MARINE BIOLOGY

Use of unmanned aerial vehicles (UAVs) for mark-resight nesting population estimation of adult female green sea turtles at Raine Island

(2020) Andrew Dunstan et al.   PLoS One

First confirmed detection of SARS-CoV-2 in untreated wastewater in Australia: A proof of concept for the wastewater surveillance of COVID-19 in the community

(2020) Warish Ahmed et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Riders on the storm: loggerhead sea turtles detect and respond to a major hurricane in the Northwest Atlantic Ocean

(2020) Leah M. Crowe et al.   Movement Ecology

Satellite Tracking Can Inform Population-Level Dispersal to Foraging Grounds of Post-nesting Kemp’s Ridley Sea Turtles

(2020) Christian Gredzens et al.   Frontiers in Marine Science

Natal Origin Identification of Green Turtles in the North Pacific by Genome-Wide Population Analysis With Limited DNA Samples

(2020) Tomoko Hamabata et al.   Frontiers in Marine Science

Meiofauna Life on Loggerhead Sea Turtles-Diversely Structured Abundance and Biodiversity Hotspots That Challenge the Meiofauna Paradox

(2020) Jeroen Ingels et al.   Diversity-Basel

Using environmental DNA and occupancy modeling to estimate rangewide metapopulation dynamics

(2020) Chad Martel et al.   MOLECULAR ECOLOGY

Disease risk analysis in sea turtles: A baseline study to inform conservation efforts

(2020) Narges Mashkour et al.   PLoS One

Plastic Ingestion in Post-hatchling Sea Turtles: Assessing a Major Threat in Florida Near Shore Waters

(2020) Catherine B. Eastman et al.   Frontiers in Marine Science

Beyond Biodiversity: Can Environmental DNA (eDNA) Cut It as a Population Genetics Tool?

(2019) Clare I.M. Adams et al.   Genes

Evaluating monitoring options for conservation: comparing traditional and environmental DNA tools for a critically endangered mammal

(2019) Chanjuan Qu et al.   NATURWISSENSCHAFTEN

The evolutionary history and global phylogeography of the green turtle ( Chelonia mydas )

(2019) Michael P. Jensen et al.   JOURNAL OF BIOGEOGRAPHY

Environmental DNA for improved detection and environmental surveillance of schistosomiasis

(2019) Mita E. Sengupta et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

eDNA Increases the Detectability of Ranavirus Infection in an Alpine Amphibian Population

(2019) Claude Miaud et al.   Viruses-Basel

Conservation importance of previously undescribed abundance trends: increase in loggerhead turtle numbers nesting on an Atlantic island

(2019) Jacques-Olivier Laloë et al.   ORYX

Differences in antibody responses against Chelonid alphaherpesvirus 5 suggest differences in virus biology between green turtles from Hawaii and Florida

(2019) Thierry M. Work et al.   JOURNAL OF VIROLOGY

Sampling nesting sea turtles: impact of survey error on trend detection

(2019) AU Whiting et al.   MARINE ECOLOGY PROGRESS SERIES

Sea turtle populations are overestimated worldwide from remigration intervals: correction for bias

(2019) P Casale et al.   Endangered Species Research

Detection of the European pond turtle (Emys orbicularis) by environmental DNA: is eDNA adequate for reptiles?

(2018) Matthieu Raemy et al.   AMPHIBIA-REPTILIA

A novel method for photo-identification of sea turtles using scale patterns on the front flippers

(2018) Christopher R. Gatto et al.   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

I3S Pattern as a mark-recapture tool to identify captured and free-swimming sea turtles: an assessment

(2018) B Calmanovici et al.   MARINE ECOLOGY PROGRESS SERIES

eDNA metabarcoding as a new surveillance approach for coastal Arctic biodiversity

(2018) Anaïs Lacoursière-Roussel et al.   Ecology and Evolution

I3S Pattern as a mark-recapture tool to identify captured and free-swimming sea turtles: an assessment

(2018) B Calmanovici et al.   MARINE ECOLOGY PROGRESS SERIES

Utility of eDNA and occupancy models for monitoring an endangered fish across diverse riverine habitats

(2018) Garret J. Strickland et al.   HYDROBIOLOGIA

Characterizing a Sea Turtle Developmental Habitat Using Landsat Observations of Surface-Pelagic Drift Communities in the Eastern Gulf of Mexico

(2018) Robert F. Hardy et al.   IEEE Journal of Selected Topics in Applied Earth Observations and Remote Sensing

A Versatile Rapture (RAD-Capture) Platform for Genotyping Marine Turtles

(2018) Lisa Komoroske et al.   Molecular Ecology Resources

Potential Noncutaneous Sites of Chelonid Herpesvirus 5 Persistence and Shedding in Green Sea Turtles Chelonia mydas

(2017) Annie Page-Karjian et al.   JOURNAL OF AQUATIC ANIMAL HEALTH

Is the detection of aquatic environmental DNA influenced by substrate type?

(2017) Andrew S. Buxton et al.   PLoS One

Biomonitoring of marine vertebrates in Monterey Bay using eDNA metabarcoding

(2017) Elizabeth A. Andruszkiewicz et al.   PLoS One

Controls on eDNA movement in streams: Transport, Retention, and Resuspension

(2017) Arial J. Shogren et al.   Scientific Reports

Precision wildlife medicine: applications of the human-centred precision medicine revolution to species conservation

(2016) Jenny Whilde et al.   GLOBAL CHANGE BIOLOGY

Next-generation monitoring of aquatic biodiversity using environmental DNA metabarcoding

(2016) Alice Valentini et al.   MOLECULAR ECOLOGY

Using occupancy modelling to compare environmental DNA to traditional field methods for regional-scale monitoring of an endangered aquatic species

(2016) Molly C. Schmelzle et al.   Molecular Ecology Resources

Estimating fish abundance and biomass from eDNA concentrations: variability among capture methods and environmental conditions

(2016) Anaïs Lacoursière-Roussel et al.   Molecular Ecology Resources

A review of fibropapillomatosis in Green turtles (Chelonia mydas)

(2016) K. Jones et al.   VETERINARY JOURNAL

Critical considerations for the application of environmental DNA methods to detect aquatic species

(2016) Caren S. Goldberg et al.   Methods in Ecology and Evolution

The ecology of environmental DNA and implications for conservation genetics

(2015) Matthew A. Barnes et al.   CONSERVATION GENETICS

Development and application of an eDNA method to detect and quantify a pathogenic parasite in aquatic ecosystems

(2015) J. R. Huver et al.   ECOLOGICAL APPLICATIONS

Quantifying chelonid herpesvirus 5 in symptomatic and asymptomatic rehabilitating green sea turtles

(2015) A Page-Karjian et al.   Endangered Species Research

Development and Validation of Environmental DNA (eDNA) Markers for Detection of Freshwater Turtles

(2015) Christina M. Davy et al.   PLoS One

History, applications, methodological issues and perspectives for the use environmental DNA (eDNA) in marine and freshwater environments

(2015) Edgardo E. Díaz-Ferguson et al.   REVISTA DE BIOLOGIA TROPICAL

Genetic structure of Florida green turtle rookeries as indicated by mitochondrial DNA control region sequences

(2014) Brian M. Shamblin et al.   CONSERVATION GENETICS

Environmental Conditions Influence eDNA Persistence in Aquatic Systems

(2014) Matthew A. Barnes et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

REVIEW: The detection of aquatic animal species using environmental DNA - a review of eDNA as a survey tool in ecology

(2014) Helen C. Rees et al.   JOURNAL OF APPLIED ECOLOGY

Validation of a sensitive PCR assay for the detection of Chelonid fibropapilloma-associated herpesvirus in latent turtle infections

(2014) Alonzo Alfaro-Núñez et al.   JOURNAL OF VIROLOGICAL METHODS

Geographic Patterns of Genetic Variation in a Broadly Distributed Marine Vertebrate: New Insights into Loggerhead Turtle Stock Structure from Expanded Mitochondrial DNA Sequences

(2014) Brian M. Shamblin et al.   PLoS One

Using Environmental DNA to Census Marine Fishes in a Large Mesocosm

(2014) Ryan P. Kelly et al.   PLoS One

Dynamics of Virus Shedding and In Situ Confirmation of Chelonid Herpesvirus 5 in Hawaiian Green Turtles With Fibropapillomatosis

(2014) T. M. Work et al.   VETERINARY PATHOLOGY

The draft genomes of soft-shell turtle and green sea turtle yield insights into the development and evolution of the turtle-specific body plan

(2013) Zhuo Wang et al.   NATURE GENETICS

Global phylogeography and evolution of chelonid fibropapilloma-associated herpesvirus

(2012) A. R. Patricio et al.   JOURNAL OF GENERAL VIROLOGY

Expanded mitochondrial control region sequences increase resolution of stock structure among North Atlantic loggerhead turtle rookeries

(2012) BM Shamblin et al.   MARINE ECOLOGY PROGRESS SERIES

Mitogenomic sequences better resolve stock structure of southern Greater Caribbean green turtle rookeries

(2012) BRIAN M. SHAMBLIN et al.   MOLECULAR ECOLOGY

Marine turtle mitogenome phylogenetics and evolution

(2012) Sebastián Duchene et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

“Sight-unseen” detection of rare aquatic species using environmental DNA

(2011) Christopher L. Jerde et al.   Conservation Letters

Loggerhead turtle eggshells as a source of maternal nuclear genomic DNA for population genetic studies

(2010) BRIAN M. SHAMBLIN et al.   Molecular Ecology Resources

Global research priorities for sea turtles: informing management and conservation in the 21st century

(2010) M Hamann et al.   Endangered Species Research

Relationship between fibropapillomatosis and environmental quality: a case study with Chelonia mydas off Brazil

(2009) RG dos Santos et al.   DISEASES OF AQUATIC ORGANISMS

Species detection using environmental DNA from water samples

(2008) G. F. Ficetola et al.   Biology Letters

Evolutionary relationships of marine turtles: A molecular phylogeny based on nuclear and mitochondrial genes

(2008) Eugenia Naro-Maciel et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION