Biofilm formation by Non-O157 Shiga toxin-producing Escherichia coli in monocultures and co-cultures with meat processing surface bacteria

Facultative Anaerobes Shape the Multispecies Biofilms Composed of Meat Processing Surface Bacteria and Escherichia coli O157:H7 or Salmonella Typhimurium

(2019) Jeyachchandran Visvalingam et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Mixed-species biofilms in the food industry: Current knowledge and novel control strategies

(2019) Lei Yuan et al.   CRITICAL REVIEWS IN FOOD SCIENCE AND NUTRITION

Dynamics of microflora on conveyor belts in a beef fabrication facility during sanitation

(2018) Hui Wang et al.   FOOD CONTROL

Dynamics of Biofilm Formation by Salmonella Typhimurium and Beef Processing Plant Bacteria in Mono- and Dual-Species Cultures

(2018) Jeyachchandran Visvalingam et al.   MICROBIAL ECOLOGY

Mapping sources of contamination of Escherichia coli on beef in the fabrication facility of a commercial beef packing plant

(2017) Xianqin Yang et al.   FOOD CONTROL

Microbial efficacy and impact on the population of Escherichia coli of a routine sanitation process for the fabrication facility of a beef packing plant

(2017) Xianqin Yang et al.   FOOD CONTROL

Impact of persistent and nonpersistent generic Escherichia coli and Salmonella sp. recovered from a beef packing plant on biofilm formation by E. coli O157

(2017) J. Visvalingam et al.   JOURNAL OF APPLIED MICROBIOLOGY

Genome-Based Comparison of Cyclic Di-GMP Signaling in Pathogenic and Commensal Escherichia coli Strains

(2015) Tatyana L. Povolotsky et al.   JOURNAL OF BACTERIOLOGY

Expression and Genetic Activation of Cyclic Di-GMP-Specific Phosphodiesterases in Escherichia coli

(2015) Alberto Reinders et al.   JOURNAL OF BACTERIOLOGY

Determination of Sources of Escherichia coli on Beef by Multiple-Locus Variable-Number Tandem Repeat Analysis

(2015) XIANQIN YANG et al.   JOURNAL OF FOOD PROTECTION

Microbial biofilms: biosurfactants as antibiofilm agents

(2014) Ibrahim M. Banat et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Growth media and temperature effects on biofilm formation by serotype O157:H7 and non-O157 Shiga toxin-producingEscherichia coli

(2014) Gaylen A. Uhlich et al.   FEMS MICROBIOLOGY LETTERS

A new biofilm-associated colicin with increased efficiency against biofilm bacteria

(2014) Olaya Rendueles et al.   ISME Journal

High prevalence of biofilm synergy among bacterial soil isolates in cocultures indicates bacterial interspecific cooperation

(2014) Dawei Ren et al.   ISME Journal

Biofilm Formation and Sanitizer Resistance of Escherichia coli O157:H7 Strains Isolated from “High Event Period” Meat Contamination

(2014) RONG WANG et al.   JOURNAL OF FOOD PROTECTION

Interactions in multispecies biofilms: do they actually matter?

(2014) Mette Burmølle et al.   TRENDS IN MICROBIOLOGY

Kinetics of biofilm formation and desiccation survival ofListeria monocytogenesin single and dual species biofilms withPseudomonas fluorescens,Serratia proteamaculansorShewanella balticaon food-grade stainless steel surfaces

(2013) Hessam Edin Daneshvar Alavi et al.   BIOFOULING

QUAST: quality assessment tool for genome assemblies

(2013) Alexey Gurevich et al.   BIOINFORMATICS

Cellulose as an Architectural Element in Spatially Structured Escherichia coli Biofilms

(2013) D. O. Serra et al.   JOURNAL OF BACTERIOLOGY

Mixed Biofilm Formation by Shiga Toxin–Producing Escherichia coli and Salmonella enterica Serovar Typhimurium Enhanced Bacterial Resistance to Sanitization due to Extracellular Polymeric Substances

(2013) RONG WANG et al.   JOURNAL OF FOOD PROTECTION

Phage insertion in mlrA and variations in rpoS limit curli expression and biofilm formation in Escherichia coli serotype O157 : H7

(2013) G. A. Uhlich et al.   MICROBIOLOGY-SGM

Microanatomy at Cellular Resolution and Spatial Order of Physiological Differentiation in a Bacterial Biofilm

(2013) D. O. Serra et al.   mBio

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

(2012) Anton Bankevich et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Biofilm Formation by Shiga Toxin–Producing Escherichia coli O157:H7 and Non-O157 Strains and Their Tolerance to Sanitizers Commonly Used in the Food Processing Environment

(2012) RONG WANG et al.   JOURNAL OF FOOD PROTECTION

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Curli Functional Amyloid Systems Are Phylogenetically Widespread and Display Large Diversity in Operon and Protein Structure

(2012) Morten S. Dueholm et al.   PLoS One

Determination of Adhesin Gene Sequences in, and Biofilm Formation by, O157 and Non-O157 Shiga Toxin-ProducingEscherichia coliStrains Isolated from Different Sources

(2011) Franciele Tafarello Biscola et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Ten-Year Trends and Risk Factors for Non-O157 Shiga Toxin-Producing Escherichia coli Found Through Shiga Toxin Testing, Connecticut, 2000-2009

(2011) J. L. Hadler et al.   CLINICAL INFECTIOUS DISEASES

Attachment and biofilm formation by Escherichia coli O157:H7 at different temperatures, on various food-contact surfaces encountered in beef processing

(2011) Dimitra Dourou et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Enhanced Surface Colonization by Escherichia coli O157:H7 in Biofilms Formed by an Acinetobacter calcoaceticus Isolate from Meat-Processing Environments

(2010) O. Habimana et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Inhibition of the Early Stage of Salmonella enterica Serovar Enteritidis Biofilm Development on Stainless Steel by Cell-Free Supernatant of a Hafnia alvei Culture

(2010) N. G. Chorianopoulos et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Prodigal: prokaryotic gene recognition and translation initiation site identification

(2010) Doug Hyatt et al.   BMC BIOINFORMATICS

Escherichia coli K-12 possesses multiple cryptic but functional chaperone-usher fimbriae with distinct surface specificities

(2010) Charalampia-Georgia Korea et al.   ENVIRONMENTAL MICROBIOLOGY

EhaA is a novel autotransporter protein of enterohemorrhagic Escherichia coli O157:H7 that contributes to adhesion and biofilm formation

(2008) Timothy J. Wells et al.   ENVIRONMENTAL MICROBIOLOGY