Advances in nucleic acid amplification techniques (NAATs): COVID-19 point-of-care diagnostics as an example

Defining the role of asymptomatic and pre-symptomatic SARS-CoV-2 transmission – a living systematic review

(2021) Xueting Qiu et al.   CLINICAL MICROBIOLOGY AND INFECTION

Development of a reverse transcription recombinase polymerase amplification assay for rapid and direct visual detection of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2)

(2021) Yee Ling Lau et al.   PLoS One

Evaluation of Abbott BinaxNOW Rapid Antigen Test for SARS-CoV-2 Infection at Two Community-Based Testing Sites — Pima County, Arizona, November 3–17, 2020

(2021) Jessica L. Prince-Guerra et al.   MMWR-MORBIDITY AND MORTALITY WEEKLY REPORT

Rapid electrochemical detection of coronavirus SARS-CoV-2

(2021) Thanyarat Chaibun et al.   Nature Communications

Advances in Clustered, Regularly Interspaced Short Palindromic Repeats (CRISPR)-Based Diagnostic Assays Assisted by Micro/Nanotechnologies

(2021) Huahua Yue et al.   ACS Nano

A novel One-pot rapid diagnostic technology for COVID-19

(2021) Junmin Li et al.   ANALYTICA CHIMICA ACTA

Evaluation of Immuno-Rolling Circle Amplification for Multiplex Detection and Profiling of Antigen-Specific Antibody Isotypes

(2021) Sara Horta et al.   ANALYTICAL CHEMISTRY

Diagnosis of SARS-CoV-2 Infection with LamPORE, a High-Throughput Platform Combining Loop-Mediated Isothermal Amplification and Nanopore Sequencing

(2021) Leon Peto et al.   JOURNAL OF CLINICAL MICROBIOLOGY

COVID-19 Pandemic: Review of Contemporary and Forthcoming Detection Tools

(2021) Mumtarin Jannat Oishee et al.   Infection and Drug Resistance

Point-of-Care PCR Assays for COVID-19 Detection

(2021) Niharika Gupta et al.   Biosensors-Basel

The tracrRNA in CRISPR Biology and Technologies

(2021) Chunyu Liao et al.   Annual Review of Genetics

A smartphone-based visual biosensor for CRISPR-Cas powered SARS-CoV-2 diagnostics

(2021) Long Ma et al.   BIOSENSORS & BIOELECTRONICS

A systematic review comparing at-home diagnostic tests for SARS-CoV-2: Key points for pharmacy practice, including regulatory information

(2021) Casey M. Kepczynski et al.   JOURNAL OF THE AMERICAN PHARMACISTS ASSOCIATION

CRISPR-based diagnostics

(2021) Michael M. Kaminski et al.   Nature Biomedical Engineering

Sensitive and Easy-Read CRISPR Strip for COVID-19 Rapid Point-of-Care Testing

(2021) Hao Li et al.   CRISPR Journal

CRISPR-Cas based virus detection: Recent advances and perspectives

(2021) Lijuan Yin et al.   BIOSENSORS & BIOELECTRONICS

Development and Clinical Application of A Rapid IgM‐IgG Combined Antibody Test for SARS‐CoV‐2 Infection Diagnosis

(2020) Zhengtu Li et al.   JOURNAL OF MEDICAL VIROLOGY

CRISPR-Cas12a based internal negative control for nonspecific products of exponential rolling circle amplification

(2020) Bo Tian et al.   NUCLEIC ACIDS RESEARCH

Ultra-sensitive and high-throughput CRISPR-Powered COVID-19 diagnosis

(2020) Zhen Huang et al.   BIOSENSORS & BIOELECTRONICS

Profiling Early Humoral Response to Diagnose Novel Coronavirus Disease (COVID-19)

(2020) Li Guo et al.   CLINICAL INFECTIOUS DISEASES

Performance of Abbott ID NOW COVID-19 rapid nucleic acid amplification test in nasopharyngeal swabs transported in viral media and dry nasal swabs, in a New York City academic institution

(2020) Atreyee Basu et al.   JOURNAL OF CLINICAL MICROBIOLOGY

CRISPR–Cas12-based detection of SARS-CoV-2

(2020) James P. Broughton et al.   NATURE BIOTECHNOLOGY

ddPCR: a more accurate tool for SARS-CoV-2 detection in low viral load specimens

(2020) Tao Suo et al.   Emerging Microbes & Infections

Point-of-Care RNA-Based Diagnostic Device for COVID-19

(2020) Ting Yang et al.   Diagnostics

CRISPR Mediated Biosensing Toward Understanding Cellular Biology and Point‐of‐Care Diagnosis

(2020) Yifan Dai et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Loop mediated isothermal amplification (LAMP) assays as a rapid diagnostic for COVID-19

(2020) Junaid Kashir et al.   MEDICAL HYPOTHESES

Rapid Direct Nucleic Acid Amplification Test without RNA Extraction for SARS-CoV-2 Using a Portable PCR Thermocycler

(2020) Soon Keong Wee et al.   Genes

Loop-Mediated Isothermal Amplification (LAMP): A Rapid, Sensitive, Specific, and Cost-Effective Point-of-Care Test for Coronaviruses in the Context of COVID-19 Pandemic

(2020) Robin Augustine et al.   Biology-Basel

Rapid point-of-care detection of SARS-CoV-2 using reverse transcription loop-mediated isothermal amplification (RT-LAMP)

(2020) Lena Mautner et al.   Virology Journal

iSCAN: An RT-LAMP-coupled CRISPR-Cas12 module for rapid, sensitive detection of SARS-CoV-2

(2020) Zahir Ali et al.   VIRUS RESEARCH

Direct detection of methicillin-resistant in Staphylococcus spp. in positive blood culture by isothermal recombinase polymerase amplification combined with lateral flow dipstick assay

(2020) Arpasiri Srisrattakarn et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

Ultrasensitive and visual detection of SARS-CoV-2 using all-in-one dual CRISPR-Cas12a assay

(2020) Xiong Ding et al.   Nature Communications

The SARS-COV-2 Spike Protein Binds Sialic Acids and Enables Rapid Detection in a Lateral Flow Point of Care Diagnostic Device

(2020) Alexander N. Baker et al.   ACS Central Science

Rapid and accurate detection of African swine fever virus by DNA endonuclease-targeted CRISPR trans reporter assay

(2020) Zongjie Li et al.   ACTA BIOCHIMICA ET BIOPHYSICA SINICA

Contamination-free visual detection of SARS-CoV-2 with CRISPR/Cas12a: A promising method in the point-of-care detection

(2020) Yanju Chen et al.   BIOSENSORS & BIOELECTRONICS

A highly effective reverse-transcription loop-mediated isothermal amplification (RT-LAMP) assay for the rapid detection of SARS-CoV-2 infection

(2020) Veronica L. Fowler et al.   JOURNAL OF INFECTION

Analysis and validation of a highly sensitive one-step nested quantitative real-time polymerase chain reaction assay for specific detection of severe acute respiratory syndrome coronavirus 2

(2020) Yang Zhang et al.   Virology Journal

CRISPR/Cas Systems towards Next-Generation Biosensing

(2019) Yi Li et al.   TRENDS IN BIOTECHNOLOGY

An RNA-Guided Cas9 Nickase-Based Method for Universal Isothermal DNA Amplification

(2019) Ting Wang et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

FLASH: a next-generation CRISPR diagnostic for multiplexed detection of antimicrobial resistance sequences

(2019) Jenai Quan et al.   NUCLEIC ACIDS RESEARCH

CRISPR/Cas Multiplexed Biosensing: A Challenge or an Insurmountable Obstacle?

(2019) Yi Li et al.   TRENDS IN BIOTECHNOLOGY

Signal amplification strategies for paper-based analytical devices

(2019) Linyang Liu et al.   BIOSENSORS & BIOELECTRONICS

SHERLOCK: nucleic acid detection with CRISPR nucleases

(2019) Max J. Kellner et al.   Nature Protocols

Exponential isothermal amplification of nucleic acids and amplified assays for proteins, cells, and enzyme activities

(2018) Michael S Reid et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Bidirectional Degradation of DNA Cleavage Products Catalyzed by CRISPR/Cas9

(2018) Anthony A. Stephenson et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Recombinase polymerase amplification: Basics, applications and recent advances

(2018) Ivan Magriñá Lobato et al.   TRAC-TRENDS IN ANALYTICAL CHEMISTRY

CRISPR-Cas12a-assisted nucleic acid detection

(2018) Shi-Yuan Li et al.   Cell Discovery

Isothermal DNA amplification combined with lateral flow dipsticks for detection of biothreat agents

(2018) Aleksandra A. Zasada et al.   ANALYTICAL BIOCHEMISTRY

PrimedRPA: primer design for recombinase polymerase amplification assays

(2018) Matthew Higgins et al.   BIOINFORMATICS

A CRISPR–Cas9-triggered strand displacement amplification method for ultrasensitive DNA detection

(2018) Wenhua Zhou et al.   Nature Communications

Rapid and visual detection of Mycobacterium tuberculosis complex using recombinase polymerase amplification combined with lateral flow strips

(2017) Qinglin Ma et al.   MOLECULAR AND CELLULAR PROBES

RNA targeting with CRISPR–Cas13

(2017) Omar O. Abudayyeh et al.   NATURE

CUT-PCR: CRISPR-mediated, ultrasensitive detection of target DNA using PCR

(2017) S H Lee et al.   ONCOGENE

Specific and Sensitive Isothermal Electrochemical Biosensor for Plant Pathogen DNA Detection with Colloidal Gold Nanoparticles as Probes

(2017) Han Yih Lau et al.   Scientific Reports

Recombinase Polymerase Amplification for Diagnostic Applications

(2016) R. K. Daher et al.   CLINICAL CHEMISTRY

Factors influencing Recombinase polymerase amplification (RPA) assay outcomes at point of care

(2016) Lorraine Lillis et al.   MOLECULAR AND CELLULAR PROBES

Two distinct RNase activities of CRISPR-C2c2 enable guide-RNA processing and RNA detection

(2016) Alexandra East-Seletsky et al.   NATURE

Rapid, Single-Cell Electrochemical Detection of Mycobacterium tuberculosis Using Colloidal Gold Nanoparticles

(2015) Benjamin Y. C. Ng et al.   ANALYTICAL CHEMISTRY

Advances in isothermal amplification: novel strategies inspired by biological processes

(2015) Jia Li et al.   BIOSENSORS & BIOELECTRONICS

Recombinase polymerase amplification: Emergence as a critical molecular technology for rapid, low-resource diagnostics

(2015) Ameh James et al.   EXPERT REVIEW OF MOLECULAR DIAGNOSTICS

Loop-mediated isothermal amplification (LAMP): principle, features, and future prospects

(2015) Tsugunori Notomi et al.   JOURNAL OF MICROBIOLOGY

A simple bridging flocculation assay for rapid, sensitive and stringent detection of gene specific DNA methylation

(2015) Eugene J. H. Wee et al.   Scientific Reports

Crystal Structure of Cas9 in Complex with Guide RNA and Target DNA

(2014) Hiroshi Nishimasu et al.   CELL

Rolling circle amplification: a versatile tool for chemical biology, materials science and medicine

(2014) M. Monsur Ali et al.   CHEMICAL SOCIETY REVIEWS

Nanopore-based sensing devices and applications to genome sequencing: a brief history and the missing pieces

(2014) Shuo Huang   CHINESE SCIENCE BULLETIN

Equipment-Free Incubation of Recombinase Polymerase Amplification Reactions Using Body Heat

(2014) Zachary Austin Crannell et al.   PLoS One

Polymerase Chain Reaction

(2013) Lilit Garibyan et al.   JOURNAL OF INVESTIGATIVE DERMATOLOGY

Primer-BLAST: A tool to design target-specific primers for polymerase chain reaction

(2012) Jian Ye et al.   BMC BIOINFORMATICS

Rolling Circle Amplification Combined with Gold Nanoparticle Aggregates for Highly Sensitive Identification of Single-Nucleotide Polymorphisms

(2010) Jishan Li et al.   ANALYTICAL CHEMISTRY

Rolling Circle Amplification: Applications in Nanotechnology and Biodetection with Functional Nucleic Acids

(2008) Weian Zhao et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Enhancing helicase-dependent amplification by fusing the helicase with the DNA polymerase

(2008) Aurélie Motré et al.   GENE

Loop-mediated isothermal amplification (LAMP) of gene sequences and simple visual detection of products

(2008) Norihiro Tomita et al.   Nature Protocols