Nanopore-based sensing devices and applications to genome sequencing: a brief history and the missing pieces

Single molecule analysis by biological nanopore sensors

(2014) Yi-Lun Ying et al.   ANALYST

Decoding long nanopore sequencing reads of natural DNA

(2014) Andrew H Laszlo et al.   NATURE BIOTECHNOLOGY

Functional truncated membrane pores

(2014) D. Stoddart et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Slow DNA Transport through Nanopores in Hafnium Oxide Membranes

(2013) Joseph Larkin et al.   ACS Nano

Single-molecule DNA detection using a novel SP1 protein nanopore

(2013) Hai-Yan Wang et al.   CHEMICAL COMMUNICATIONS

Nanopore-Based Identification of Individual Nucleotides for Direct RNA Sequencing

(2013) Mariam Ayub et al.   NANO LETTERS

Self-Assembled DNA Nanopores That Span Lipid Bilayers

(2013) Jonathan R. Burns et al.   NANO LETTERS

Solid-state and biological nanopore for real-time sensing of single chemical and sequencing of DNA

(2013) Farzin Haque et al.   Nano Today

Stochastic detection of Pim protein kinases reveals electrostatically enhanced association of a peptide substrate

(2013) L. Harrington et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

An engineered dimeric protein pore that spans adjacent lipid bilayers

(2013) Shiksha Mantri et al.   Nature Communications

Quantification of Membrane Protein Inhibition by Optical Ion Flux in a Droplet Interface Bilayer Array

(2012) Oliver K. Castell et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

DNA Origami Gatekeepers for Solid-State Nanopores

(2012) Ruoshan Wei et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

A tale of three next generation sequencing platforms: comparison of Ion torrent, pacific biosciences and illumina MiSeq sequencers

(2012) Michael Quail et al.   BMC GENOMICS

Engineering a Rigid Protein Tunnel for Biomolecular Detection

(2012) Mohammad M. Mohammad et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Individual RNA Base Recognition in Immobilized Oligonucleotides Using a Protein Nanopore

(2012) Mariam Ayub et al.   NANO LETTERS

Reading DNA at single-nucleotide resolution with a mutant MspA nanopore and phi29 DNA polymerase

(2012) Elizabeth A Manrao et al.   NATURE BIOTECHNOLOGY

Automated forward and reverse ratcheting of DNA in a nanopore at 5-Å precision

(2012) Gerald M Cherf et al.   NATURE BIOTECHNOLOGY

Nanopores: A journey towards DNA sequencing

(2012) Meni Wanunu   Physics of Life Reviews

Synthetic Lipid Membrane Channels Formed by Designed DNA Nanostructures

(2012) M. Langecker et al.   SCIENCE

Stacked Graphene-Al2O3 Nanopore Sensors for Sensitive Detection of DNA and DNA–Protein Complexes

(2011) Bala Murali Venkatesan et al.   ACS Nano

DNA Origami Nanopores

(2011) Nicholas A. W. Bell et al.   NANO LETTERS

Controlled Translocation of Individual DNA Molecules through Protein Nanopores with Engineered Molecular Brakes

(2011) Marcela Rincon-Restrepo et al.   NANO LETTERS

DNA Base-Specific Modulation of Microampere Transverse Edge Currents through a Metallic Graphene Nanoribbon with a Nanopore

(2011) Kamal K. Saha et al.   NANO LETTERS

Nanopore sensors for nucleic acid analysis

(2011) Bala Murali Venkatesan et al.   Nature Nanotechnology

Controlling protein translocation through nanopores with bio-inspired fluid walls

(2011) Erik C. Yusko et al.   Nature Nanotechnology

Local electrical potential detection of DNA by nanowire–nanopore sensors

(2011) Ping Xie et al.   Nature Nanotechnology

Challenges and opportunities for structural DNA nanotechnology

(2011) Andre V. Pinheiro et al.   Nature Nanotechnology

Nucleotide Discrimination with DNA Immobilized in the MspA Nanopore

(2011) Elizabeth A. Manrao et al.   PLoS One

DNA Sensing Using Nanocrystalline Surface-Enhanced Al2O3Nanopore Sensors

(2010) Bala Murali Venkatesan et al.   ADVANCED FUNCTIONAL MATERIALS

Urea Facilitates the Translocation of Single-Stranded DNA and RNA Through the α-Hemolysin Nanopore

(2010) Deanpen Japrung et al.   BIOPHYSICAL JOURNAL

Recognition Tunneling Measurement of the Conductance of DNA Bases Embedded in Self-Assembled Monolayers

(2010) Shuo Huang et al.   Journal of Physical Chemistry C

Nucleobase Recognition in ssDNA at the Central Constriction of the α-Hemolysin Pore

(2010) David Stoddart et al.   NANO LETTERS

Electronic Signatures of all Four DNA Nucleosides in a Tunneling Gap

(2010) Shuai Chang et al.   NANO LETTERS

DNA Translocation through Graphene Nanopores

(2010) Christopher A. Merchant et al.   NANO LETTERS

DNA Translocation through Graphene Nanopores

(2010) Grégory F. Schneider et al.   NANO LETTERS

Recognition tunneling

(2010) Stuart Lindsay et al.   NANOTECHNOLOGY

Graphene as a subnanometre trans-electrode membrane

(2010) S. Garaj et al.   NATURE

Identifying single bases in a DNA oligomer with electron tunnelling

(2010) Shuo Huang et al.   Nature Nanotechnology

Hybrid pore formation by directed insertion of α-haemolysin into solid-state nanopores

(2010) Adam R. Hall et al.   Nature Nanotechnology

Identifying single nucleotides by tunnelling current

(2010) Makusu Tsutsui et al.   Nature Nanotechnology

Rapid electronic detection of probe-specific microRNAs using thin nanopore sensors

(2010) Meni Wanunu et al.   Nature Nanotechnology

Replication of individual DNA molecules under electronic control using a protein nanopore

(2010) Felix Olasagasti et al.   Nature Nanotechnology

Nanopore DNA sequencing with MspA

(2010) I. M. Derrington et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Translocation of Single-Stranded DNA Through Single-Walled Carbon Nanotubes

(2010) H. Liu et al.   SCIENCE

Multiple Base-Recognition Sites in a Biological Nanopore: Two Heads are Better than One

(2009) David Stoddart et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

DNA Strands from Denatured Duplexes are Translocated through Engineered Protein Nanopores at Alkaline pH

(2009) Giovanni Maglia et al.   NANO LETTERS

The structure of a cytolytic α-helical toxin pore reveals its assembly mechanism

(2009) Marcus Mueller et al.   NATURE

Translocation of double-stranded DNA through membrane-adapted phi29 motor protein nanopores

(2009) David Wendell et al.   Nature Nanotechnology

Partial sequencing of a single DNA molecule with a scanning tunnelling microscope

(2009) Hiroyuki Tanaka et al.   Nature Nanotechnology

Continuous base identification for single-molecule nanopore DNA sequencing

(2009) James Clarke et al.   Nature Nanotechnology

Single-nucleotide discrimination in immobilized DNA oligonucleotides with a biological nanopore

(2009) D. Stoddart et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Electron beam nanosculpting of suspended graphene sheets

(2008) Michael D. Fischbein et al.   APPLIED PHYSICS LETTERS

The potential and challenges of nanopore sequencing

(2008) Daniel Branton et al.   NATURE BIOTECHNOLOGY

Single-molecule DNA detection with an engineered MspA protein nanopore

(2008) T. Z. Butler et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Single-molecule biophysics: at the interface of biology, physics and chemistry

(2007) A. A Deniz et al.   Journal of the Royal Society Interface