Complex Changes in Membrane Lipids Associated with the Modification of Autophagy in Arabidopsis

Transmembrane phospholipid translocation mediated by Atg9 is involved in autophagosome formation

(2021) Minami Orii et al.   JOURNAL OF CELL BIOLOGY

An Arabidopsis lipid map reveals differences between tissues and dynamic changes throughout development

(2021) Cheka Kehelpannala et al.   PLANT JOURNAL

Autophagy mediates temporary reprogramming and dedifferentiation in plant somatic cells

(2020) Eleazar Rodriguez et al.   EMBO JOURNAL

A PI3K-WIPI2 positive feedback loop allosterically activates LC3 lipidation in autophagy

(2020) Dorotea Fracchiolla et al.   JOURNAL OF CELL BIOLOGY

Autophagy Plays Prominent Roles in Amino Acid, Nucleotide, and Carbohydrate Metabolism During Fixed-carbon Starvation in MaizeE

(2020) Fionn McLoughlin et al.   PLANT CELL

TOR mediates the autophagy response to altered nucleotide homeostasis in an RNase mutant

(2020) Zakayo Kazibwe et al.   JOURNAL OF EXPERIMENTAL BOTANY

Lipid profiles of autophagic structures isolated from wild type and Atg2 mutant Drosophila

(2020) Hajnalka Laczkó-Dobos et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR AND CELL BIOLOGY OF LIPIDS

Atg2 mediates direct lipid transfer between membranes for autophagosome formation

(2019) Takuo Osawa et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

ATG2 transports lipids to promote autophagosome biogenesis

(2019) Diana P. Valverde et al.   JOURNAL OF CELL BIOLOGY

Proteomic and lipidomic analyses of the Arabidopsis atg5 autophagy mutant reveal major changes in ER and peroxisome metabolisms and in lipid composition

(2019) Marien Havé et al.   NEW PHYTOLOGIST

Dual Role for Autophagy in Lipid Metabolism in Arabidopsis

(2019) Jilian Fan et al.   PLANT CELL

Autophagy-Independent Functions of the Autophagy Machinery

(2019) Lorenzo Galluzzi et al.   CELL

De novo phosphatidylcholine synthesis is required for autophagosome membrane formation and maintenance during autophagy

(2019) Gabriela Andrejeva et al.   Autophagy

Arabidopsis CTP:phosphocholine cytidylyltransferase 1 is phosphorylated and inhibited by sucrose nonfermenting 1–related protein kinase 1 (SnRK1)

(2019) Kristian Mark P. Caldo et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Local Fatty Acid Channeling into Phospholipid Synthesis Drives Phagophore Expansion during Autophagy

(2019) Maximilian Schütter et al.   CELL

Autophagy: The Master of Bulk and Selective Recycling

(2018) Richard S. Marshall et al.   Annual Review of Plant Biology

High-mass-resolution MALDI mass spectrometry imaging reveals detailed spatial distribution of metabolites and lipids in roots of barley seedlings in response to salinity stress

(2018) Lenin D. Sarabia et al.   Metabolomics

RAPTOR Controls Developmental Growth Transitions by Altering the Hormonal and Metabolic Balance

(2018) Mohamed A. Salem et al.   PLANT PHYSIOLOGY

New advances in autophagy in plants: Regulation, selectivity and function

(2018) Ping Wang et al.   SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY

Autophagic flux is required for the synthesis of triacylglycerols and ribosomal protein turnover in Chlamydomonas

(2017) Inmaculada Couso et al.   JOURNAL OF EXPERIMENTAL BOTANY

Lipids in membrane dynamics during autophagy in plants

(2017) Rodrigo Enrique Gomez et al.   JOURNAL OF EXPERIMENTAL BOTANY

Autophagy in turnover of lipid stores: trans-kingdom comparison

(2017) Pernilla H Elander et al.   JOURNAL OF EXPERIMENTAL BOTANY

High spatial resolution mass spectrometry imaging reveals the genetically programmed, developmental modification of the distribution of thylakoid membrane lipids among individual cells of maize leaf

(2017) Maria Emilia Dueñas et al.   PLANT JOURNAL

ATG9 regulates autophagosome progression from the endoplasmic reticulum inArabidopsis

(2017) Xiaohong Zhuang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

TOR-Dependent and -Independent Pathways Regulate Autophagy in Arabidopsis thaliana

(2017) Yunting Pu et al.   Frontiers in Plant Science

SnRK1 activates autophagy via the TOR signaling pathway in Arabidopsis thaliana

(2017) Junmarie Soto-Burgos et al.   PLoS One

Ribosomal protein S6 kinase1 coordinates with TOR-Raptor2 to regulate thylakoid membrane biosynthesis in rice

(2016) Linxiao Sun et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR AND CELL BIOLOGY OF LIPIDS

Matrix assisted laser desorption/ionization-mass spectrometry imaging (MALDI-MSI) for direct visualization of plant metabolites in situ

(2016) Drew Sturtevant et al.   CURRENT OPINION IN BIOTECHNOLOGY

Wheat leaf lipids during heat stress: I. High day and night temperatures result in major lipid alterations

(2016) Sruthi Narayanan et al.   PLANT CELL AND ENVIRONMENT

How Very-Long-Chain Fatty Acids Could Signal Stressful Conditions in Plants?

(2016) Antoine De Bigault Du Granrut et al.   Frontiers in Plant Science

Subcellular-level resolution MALDI-MS imaging of maize leaf metabolites by MALDI-linear ion trap-Orbitrap mass spectrometer

(2015) Andrew R. Korte et al.   ANALYTICAL AND BIOANALYTICAL CHEMISTRY

Investigation of the Chemical Interface in the Soybean–Aphid and Rice–Bacteria Interactions Using MALDI-Mass Spectrometry Imaging

(2015) Adam T. Klein et al.   ANALYTICAL CHEMISTRY

Evidence for autophagy-dependent pathways of rRNA turnover inArabidopsis

(2015) Brice E Floyd et al.   Autophagy

Global Analysis of the Role of Autophagy in Cellular Metabolism and Energy Homeostasis in Arabidopsis Seedlings under Carbon Starvation

(2015) Tamar Avin-Wittenberg et al.   PLANT CELL

An enhanced plant lipidomics method based on multiplexed liquid chromatography-mass spectrometry reveals additional insights into cold- and drought-induced membrane remodeling

(2015) Pablo Tarazona et al.   PLANT JOURNAL

OsATG7 is required for autophagy-dependent lipid metabolism in rice postmeiotic anther development

(2014) Takamitsu Kurusu et al.   Autophagy

Stearoyl-CoA Desaturase 1 Activity Is Required for Autophagosome Formation

(2014) Yuta Ogasawara et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Autophagy, plant senescence, and nutrient recycling

(2014) L. Avila-Ospina et al.   JOURNAL OF EXPERIMENTAL BOTANY

A Revised Assay for Monitoring Autophagic Flux in Arabidopsis thaliana Reveals Involvement of AUTOPHAGY-RELATED9 in Autophagy

(2014) Kwang Deok Shin et al.   MOLECULES AND CELLS

Lipid changes after leaf wounding inArabidopsis thaliana: expanded lipidomic data form the basis for lipid co-occurrence analysis

(2014) Hieu Sy Vu et al.   PLANT JOURNAL

Metabolomic Response of Calotropis procera Growing in the Desert to Changes in Water Availability

(2014) Ahmed Ramadan et al.   PLoS One

ATG5 defines a phagophore domain connected to the endoplasmic reticulum during autophagosome formation in plants

(2014) Romain Le Bars et al.   Nature Communications

Glucose–TOR signalling reprograms the transcriptome and activates meristems

(2013) Yan Xiong et al.   NATURE

The role of lipid metabolism in the acquisition of desiccation tolerance inCraterostigma plantagineum: a comparative approach

(2013) Francisco Gasulla et al.   PLANT JOURNAL

The maize leaf lipidome shows multilevel genetic control and high predictive value for agronomic traits

(2013) Christian Riedelsheimer et al.   Scientific Reports

NBR1-Mediated Selective Autophagy Targets Insoluble Ubiquitinated Protein Aggregates in Plant Stress Responses

(2013) Jie Zhou et al.   PLoS Genetics

Autophagy: Pathways for Self-Eating in Plant Cells

(2012) Yimo Liu et al.   Annual Review of Plant Biology

Matrix-Assisted Laser Desorption Ionization Imaging Mass Spectrometry: In Situ Molecular Mapping

(2012) Peggi M. Angel et al.   BIOCHEMISTRY

Emerging technologies in mass spectrometry imaging

(2012) Julia H. Jungmann et al.   Journal of Proteomics

Use of mass spectrometry for imaging metabolites in plants

(2012) Young Jin Lee et al.   PLANT JOURNAL

Procedures for large-scale metabolic profiling of serum and plasma using gas chromatography and liquid chromatography coupled to mass spectrometry

(2011) Warwick B Dunn et al.   Nature Protocols

The ATG1/ATG13 Protein Kinase Complex Is Both a Regulator and a Target of Autophagic Recycling in Arabidopsis

(2011) A. Suttangkakul et al.   PLANT CELL

Autophagy differentially controls plant basal immunity to biotrophic and necrotrophic pathogens

(2011) Heike D. Lenz et al.   PLANT JOURNAL

RNS2, a conserved member of the RNase T2 family, is necessary for ribosomal RNA decay in plants

(2011) M. S. Hillwig et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Autophagic pathways and metabolic stress

(2010) S. Kaushik et al.   DIABETES OBESITY & METABOLISM

Matrix-Assisted Laser Desorption/Ionization Imaging Mass Spectrometry

(2010) Nobuhiro Zaima et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

A concise review of mass spectrometry imaging

(2010) Erika R. Amstalden van Hove et al.   JOURNAL OF CHROMATOGRAPHY A

The Rab GTPase RabG3b functions in autophagy and contributes to tracheary element differentiation in Arabidopsis

(2010) Soon Il Kwon et al.   PLANT JOURNAL

ATG8 lipidation and ATG8-mediated autophagy in Arabidopsis require ATG12 expressed from the differentially controlled ATG12A AND ATG12B loci

(2010) Taijoon Chung et al.   PLANT JOURNAL

Inhibition of Target of Rapamycin Signaling and Stress Activate Autophagy in Chlamydomonas reinhardtii

(2010) M. E. Perez-Perez et al.   PLANT PHYSIOLOGY

TOR Is a Negative Regulator of Autophagy in Arabidopsis thaliana

(2010) Yimo Liu et al.   PLoS One

Mass spectrometric imaging of small molecules

(2010) Aleš Svatoš   TRENDS IN BIOTECHNOLOGY

A combined proteomic and genetic analysis identifies a role for the lipid desaturase Desat1 in starvation-induced autophagy in Drosophila

(2009) Katja Köhler et al.   Autophagy

Atg14 and UVRAG: Mutually exclusive subunits of mammalian Beclin 1-PI3K complexes

(2009) Eisuke Itakura et al.   Autophagy

Phospholipase Dε and phosphatidic acid enhance Arabidopsis nitrogen signaling and growth

(2009) Yueyun Hong et al.   PLANT JOURNAL

SnRK1 Isoforms AKIN10 and AKIN11 Are Differentially Regulated in Arabidopsis Plants under Phosphate Starvation

(2009) S. Fragoso et al.   PLANT PHYSIOLOGY