4.8 Article

High spatial resolution mass spectrometry imaging reveals the genetically programmed, developmental modification of the distribution of thylakoid membrane lipids among individual cells of maize leaf

Journal

PLANT JOURNAL
Volume 89, Issue 4, Pages 825-838

Publisher

WILEY
DOI: 10.1111/tpj.13422

Keywords

mass spectrometry imaging; Kranz anatomy; Zea mays L.; bundle sheath; mesophyll; B73; Mo17; single cell

Categories

Funding

  1. US Department of Energy (DOE), Office of Basic Energy Sciences, Division of Chemical Sciences, Geosciences, and Biosciences
  2. National Science Foundation [EEC-0813570, IOS-1354799]
  3. Iowa State University under DOE [DE-AC02-07CH11358]
  4. Division Of Integrative Organismal Systems
  5. Direct For Biological Sciences [1639618] Funding Source: National Science Foundation

Ask authors/readers for more resources

Metabolism in plants is compartmentalized among different tissues, cells and subcellular organelles. Mass spectrometry imaging (MSI) with matrix-assisted laser desorption ionization (MALDI) has recently advanced to allow for the visualization of metabolites at single-cell resolution. Here we applied 5- and 10m high spatial resolution MALDI-MSI to the asymmetric Kranz anatomy of Zea mays (maize) leaves to study the differential localization of two major anionic lipids in thylakoid membranes, sulfoquinovosyldiacylglycerols (SQDG) and phosphatidylglycerols (PG). The quantification and localization of SQDG and PG molecular species, among mesophyll (M) and bundle sheath (BS) cells, are compared across the leaf developmental gradient from four maize genotypes (the inbreds B73 and Mo17, and the reciprocal hybrids B73xMo17 and Mo17xB73). SQDG species are uniformly distributed in both photosynthetic cell types, regardless of leaf development or genotype; however, PG shows photosynthetic cell-specific differential localization depending on the genotype and the fatty acyl chain constituent. Overall, 16:1-containing PGs primarily contribute to the thylakoid membranes of M cells, whereas BS chloroplasts are mostly composed of 16:0-containing PGs. Furthermore, PG32:0 shows genotype-specific differences in cellular distribution, with preferential localization in BS cells for B73, but more uniform distribution between BS and M cells in Mo17. Maternal inheritance is exhibited within the hybrids, such that the localization of PG 32:0 in B73xMo17 is similar to the distribution in the B73 parental inbred, whereas that of Mo17xB73 resembles the Mo17 parent. This study demonstrates the power of MALDI-MSI to reveal unprecedented insights on metabolic outcomes in multicellular organisms at single-cell resolution.

Authors

I am an author on this paper
Click your name to claim this paper and add it to your profile.

Reviews

Primary Rating

4.8
Not enough ratings

Secondary Ratings

Novelty
-
Significance
-
Scientific rigor
-
Rate this paper

Recommended

Article Biochemistry & Molecular Biology

Complex Changes in Membrane Lipids Associated with the Modification of Autophagy in Arabidopsis

Yosia Mugume, Geng Ding, Maria Emilia Duenas, Meiling Liu, Young-Jin Lee, Basil J. Nikolau, Diane C. Bassham

Summary: This study investigated the impact of autophagy on plant lipid content and composition using Arabidopsis mutants. The results showed that autophagy affects plant lipid concentrations and properties such as chain length and unsaturation.

METABOLITES (2022)

Article Biochemical Research Methods

Rapid Antibiotic Susceptibility Testing by Deuterium Labeling of Bacterial Lipids in On-Target Microdroplet Cultures

Evan A. Larson, Josiah J. Rensner, Kristina R. Larsen, Bryan Bellaire, Young Jin Lee

Summary: A new antimicrobial susceptibility test utilizing deuterium labeling of membrane lipids to track bacterial growth has been developed and validated. This method can differentiate between resistant and susceptible strains of bacteria and has clinical relevance.

JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY (2022)

Article Chemistry, Analytical

Efficient Hydrogen-Deuterium Exchange in Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry Imaging for Confident Metabolite Identification

Josiah J. Rensner, Young Jin Lee

Summary: This study developed a highly efficient hydrogen-deuterium exchange technique for more accurate metabolite identification in MALDI-MS imaging, while retaining spatial information. By combining deuterium-labeled matrix and D2O vapor, an HDX efficiency of 73-85% was achieved. This method can systematically improve untargeted metabolite annotation through METASPACE annotation.

ANALYTICAL CHEMISTRY (2022)

Article Chemistry, Analytical

Rapid and Automatic Annotation of Multiple On-Tissue Chemical Modifications in Mass Spectrometry Imaging with Metaspace

Evan A. Larson, Trevor T. Forsman, Lachlan Stuart, Theodore Alexandrov, Young Jin Lee

Summary: In this study, a pipeline for rigorous annotation of on-tissue derivatized MSI data using Metaspace was presented and validated. The pipeline enabled fast and accurate annotations of metabolites, and a method to remove false derivatized annotations was developed. This pipeline facilitates broadly targeted spatial metabolomics using multiple derivatization reagents.

ANALYTICAL CHEMISTRY (2022)

Article Chemistry, Multidisciplinary

Novel Ambient Oxidation Trends in Fingerprint Aging Discovered by Kendrick Mass Defect Analysis

Andrew E. Paulson, Young Jin Lee

Summary: KMD plot analysis is an efficient method to visually display complex high-resolution mass spectral data and rapidly determine heteroatom content and unsaturation levels of different compound classes. Research shows that fingerprint lipid oxidation changes over time, leading to complex changes in mass spectral features that correlate with fingerprint age.

ACS CENTRAL SCIENCE (2022)

Correction Biochemistry & Molecular Biology

Complex Changes in Membrane Lipids Associated with the Modification of Autophagy in Arabidopsis (vol 12, 190, 2022)

Yosia Mugume, Geng Ding, Maria Emilia Duenas, Meiling Liu, Young-Jin Lee, Basil J. Nikolau, Diane C. Bassham

METABOLITES (2022)

Review Medicine, Research & Experimental

Advances in high-throughput mass spectrometry in drug discovery

Maria Emilia Duenas, Rachel E. Peltier-Heap, Melanie Leveridge, Roland S. Annan, Frank H. Buttner, Matthias Trost

Summary: High-throughput screening is a key method in early drug discovery. Recent developments in mass spectrometry and automation have revolutionized its application, allowing for label-free assays that are cheaper, faster, and more physiologically relevant than traditional methods. This review discusses the current techniques, advantages, and disadvantages of mass spectrometry in drug discovery, as well as its potential in multiplexed cellular assays.

EMBO MOLECULAR MEDICINE (2023)

Article Biochemical Research Methods

Use of Nanoparticle Decorated Surface-Enhanced Raman Scattering Active Sol-Gel Substrates for SALDI-MS Analysis

Andrew E. Paulson, W. Ranjith Premasiri, Lawrence D. Ziegler, Young Jin Lee

Summary: Spectroscopy and mass spectrometry techniques are combined in a workflow using metal nanoparticle doped sol-gel substrates, initially developed for surface enhanced Raman scattering (SERS) analysis, as surface-assisted laser desorption/ionization-mass spectrometry (SALDI-MS) substrates. This combined technique allows for the observation of heme-related spectral features and blood triacylglycerols, demonstrating the dual functionality of the techniques. The gold NP sol-gel substrate for SALDI-MS shows lower background compared to the silver substrate.

JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY (2023)

Article Biochemical Research Methods

A high-throughput MALDI-TOF MS biochemical screen for small molecule inhibitors of the antigen aminopeptidase ERAP1

Leonie Muller, Amy K. Burton, Chloe L. Tayler, James E. Rowedder, Jonathan P. Hutchinson, Simon Peace, Julie M. Quayle, Melanie Leveridge, Roland S. Annan, Matthias Trost, Rachel Peltier-Heap, Maria Emilia Duenas

Summary: This article describes the development of a novel, high-throughput screening method based on MALDI-TOF MS for fast and label-free drug discovery of ERAP1. The peptide YTAFTIPSI was trimmed into TAFTIPSI to improve ionization efficiency. The optimal conditions for the new assay were established on the MALDI-TOF MS platform and compared to the established RF MS setup, showing comparable performance with several advantages for the MALDI-TOF MS platform.

SLAS DISCOVERY (2023)

Article Biochemical Research Methods

On-tissue chemical derivatization of volatile metabolites for matrix-assisted laser desorption/ionization mass spectrometry imaging

Trevor T. Forsman, Andrew E. Paulson, Evan A. Larson, Torey Looft, Young Jin Lee

Summary: A derivatization method using N,N,N-trimethyl-2-(piperazin-1-yl)ethan-1-aminium iodide is proposed to chemically modify short-chain fatty acids in chicken cecum, ileum, and jejunum tissue sections before sample preparation for MSI visualization.

JOURNAL OF MASS SPECTROMETRY (2023)

Article Chemistry, Analytical

Predicting Fingerprint Age Based on Ozonolysis Kinetics of Unsaturated Triacylglycerol Degradation

Daphne R. Patten, Andrew E. Paulson, Trevor T. Forsman, Young Jin Lee

Summary: Determining the age of a fingerprint has been a challenge in forensic science, and this study proposes a method based on the chemical profile of fingerprint lipids to estimate the time since deposition (TSD). The degradation of unsaturated triacylglycerols (TGs) in fingerprints is found to be influenced by ozone concentration and ambient temperature. A kinetics model is developed to describe the decay of unsaturated TGs, and it is successfully applied to analyze the aging of fingerprints in an ambient environment.

ANALYTICAL CHEMISTRY (2023)

Article Biochemical Research Methods

Comparison of Quantitative Mass Spectrometric Methods for Drug Target Identification by Thermal Proteome Profiling

Amy L. George, Frances R. Sidgwick, Jessica E. Watt, Mathew P. Martin, Matthias Trost, Jose Luis Marin-Rubio, Maria Emilia Duenas

Summary: Thermal proteome profiling (TPP) is a powerful approach to studying the interactions of therapeutic molecules with proteins. Isobaric tandem mass tags (TMTs) are commonly used in TPP analysis, but data-independent acquisition (DIA) approaches offer higher sensitivity and protein coverage with reduced costs. In this study, different DIA-based label-free quantification approaches were compared to TMT-DDA for thermal shift quantitation, and it was found that DIA approaches are a cost-effective alternative.

JOURNAL OF PROTEOME RESEARCH (2023)

Article Chemistry, Medicinal

A Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Assay Identifies Nilotinib as an Inhibitor of Inflammation in Acute Myeloid Leukemia

Jose Luis Marin-Rubio, Rachel E. Peltier-Heap, Maria Emilia Duenas, Tiaan Heunis, Abeer Dannoura, Joseph Inns, Jonathan Scott, A. John Simpson, Helen J. Blair, Olaf Heidenreich, James M. Allan, Jessica E. Watt, Mathew P. Martin, Barbara Saxty, Matthias Trost

Summary: In this study, a label-free cellular phenotypic drug discovery assay was developed to identify anti-inflammatory drugs in acute myeloid leukemia cells. The results showed that nilotinib, but not imatinib, could block inflammatory responses. Further investigation revealed that nilotinib binds to p38α and inhibits the p38α-MK2/3 signaling axis, thereby suppressing pro-inflammatory cytokine expression, cell adhesion, and innate immunity markers in activated monocytes derived from AML.

JOURNAL OF MEDICINAL CHEMISTRY (2022)

No Data Available