Microbial co-occurrence network topological properties link with reactor parameters and reveal importance of low-abundance genera

Progressive Microbial Community Networks with Incremental Organic Loading Rates Underlie Higher Anaerobic Digestion Performance

(2020) Linwei Wu et al.   mSystems

Biomethane recovery from source-diverted household blackwater: Impacts from feed sulfate

(2020) Mengjiao Gao et al.   PROCESS SAFETY AND ENVIRONMENTAL PROTECTION

Impacts of Conductive Materials on Microbial Community during Syntrophic Propionate Oxidization for Biomethane Recovery

(2020) Bing Guo et al.   WATER ENVIRONMENT RESEARCH

Uncovering microbial responses to sharp geochemical gradients in a terrace contaminated by acid mine drainage

(2020) Rui Xu et al.   ENVIRONMENTAL POLLUTION

Ecological insights into assembly processes and network structures of bacterial biofilms in full-scale biologically active carbon filters under ozone implementation

(2020) Lei Li et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Superior resolution characterisation of microbial diversity in anaerobic digesters using full-length 16S rRNA gene amplicon sequencing

(2020) Theo Y.C. Lam et al.   WATER RESEARCH

Transformation of bacterial community structure in rumen liquid anaerobic digestion of rice straw

(2020) Jinsong Liang et al.   ENVIRONMENTAL POLLUTION

Characterizing the microbial community involved in anaerobic digestion of lipid-rich wastewater to produce methane gas

(2019) Kiyohiko Nakasaki et al.   ANAEROBE

Microbiome network analysis of co-occurrence patterns in anaerobic co-digestion of sewage sludge and food waste

(2019) Esteban Orellana et al.   WATER SCIENCE AND TECHNOLOGY

Microbial community dynamics in anaerobic digesters treating conventional and vacuum toilet flushed blackwater

(2019) Mengjiao Gao et al.   WATER RESEARCH

Enhancing biomethane recovery from source-diverted blackwater through hydrogenotrophic methanogenesis dominant pathway

(2019) Mengjiao Gao et al.   CHEMICAL ENGINEERING JOURNAL

Biodegradability of wastewater determines microbial assembly mechanisms in full-scale wastewater treatment plants

(2019) Bing Zhang et al.   WATER RESEARCH

Organic loading rate and hydraulic retention time shape distinct ecological networks of anaerobic digestion related microbiome

(2018) Rui Xu et al.   BIORESOURCE TECHNOLOGY

Heterogeneity of interactions of microbial communities in regions of Taihu Lake with different nutrient loadings: A network analysis

(2018) Xinyi Cao et al.   Scientific Reports

Microbial rRNA gene expression and co-occurrence profiles associate with biokinetics and elemental composition in full-scale anaerobic digesters

(2018) Ryan M. Ziels et al.   Microbial Biotechnology

Co-occurrence network analysis reveals thermodynamics-driven microbial interactions in methanogenic bioreactors

(2018) Takashi Narihiro et al.   Environmental Microbiology Reports

Soil bacterial networks are less stable under drought than fungal networks

(2018) Franciska T. de Vries et al.   Nature Communications

Performance of anaerobic treatment of blackwater collected from different toilet flushing systems: Can we achieve both energy recovery and water conservation?

(2018) Mengjiao Gao et al.   JOURNAL OF HAZARDOUS MATERIALS

Temperature regulates deterministic processes and the succession of microbial interactions in anaerobic digestion process

(2017) Qiang Lin et al.   WATER RESEARCH

Temperature regulates methane production through the function centralization of microbial community in anaerobic digestion

(2016) Qiang Lin et al.   BIORESOURCE TECHNOLOGY

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

The core populations and co-occurrence patterns of prokaryotic communities in household biogas digesters

(2015) Junpeng Rui et al.   Biotechnology for Biofuels

The ecology of the microbiome: Networks, competition, and stability

(2015) K. Z. Coyte et al.   SCIENCE

Ammonia and temperature determine potential clustering in the anaerobic digestion microbiome

(2015) Jo De Vrieze et al.   WATER RESEARCH

Fluvial network organization imprints on microbial co-occurrence networks

(2014) S. Widder et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

454 pyrosequencing analyses of bacterial and archaeal richness in 21 full-scale biogas digesters

(2013) Carina Sundberg et al.   FEMS MICROBIOLOGY ECOLOGY

Molecular ecological network analyses

(2012) Ye Deng et al.   BMC BIOINFORMATICS

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Syntrophic butyrate and propionate oxidation processes: from genomes to reaction mechanisms

(2010) Nicolai Müller et al.   Environmental Microbiology Reports

Anaerobic Treatment of Concentrated Black Water in a UASB Reactor at a Short HRT

(2010) Marthe S. De Graaff et al.   Water