Rhizosphere Microbiome: The Emerging Barrier in Plant-Pathogen Interactions

Spatially Restricted Immune Responses Are Required for Maintaining Root Meristematic Activity upon Detection of Bacteria

(2021) Aurélia Emonet et al.   CURRENT BIOLOGY

Discriminating symbiosis and immunity signals by receptor competition in rice

(2021) Chi Zhang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Rhizosphere community selection reveals bacteria associated with reduced root disease

(2021) Chuntao Yin et al.   Microbiome

Holo-omics for deciphering plant-microbiome interactions

(2021) Ling Xu et al.   Microbiome

Co-incidence of Damage and Microbial Patterns Controls Localized Immune Responses in Roots

(2020) Feng Zhou et al.   CELL

How mycorrhizal associations drive plant population and community biology

(2020) Leho Tedersoo et al.   SCIENCE

The Plant Microbiome: From Ecology to Reductionism and Beyond

(2020) Connor R. Fitzpatrick et al.   Annual Review of Microbiology

Holo-Omics: Integrated Host-Microbiota Multi-omics for Basic and Applied Biological Research

(2020) Lasse Nyholm et al.   iScience

Achieving similar root microbiota composition in neighbouring plants through airborne signalling

(2020) Hyun Gi Kong et al.   ISME Journal

Plant Immune Mechanisms: From Reductionistic to Holistic Points of View

(2020) Jie Zhang et al.   Molecular Plant

Ligand-recognizing motifs in plant LysM receptors are major determinants of specificity

(2020) Zoltan Bozsoki et al.   SCIENCE

Enrichment of beneficial cucumber rhizosphere microbes mediated by organic acid secretion

(2020) Tao Wen et al.   Horticulture Research

Plant roots employ cell-layer-specific programs to respond to pathogenic and beneficial microbes

(2020) Christian Fröschel et al.   Cell Host & Microbe

Phyllosphere microbiota: Community dynamics and its interaction with plant hosts

(2020) Tianyu Gong et al.   Journal of Integrative Plant Biology

A review on the plant microbiome: Ecology, functions, and emerging trends in microbial application

(2019) Stéphane Compant et al.   Journal of Advanced Research

A specialized metabolic network selectively modulates Arabidopsis root microbiota

(2019) Ancheng C. Huang et al.   SCIENCE

Beneficial microbes going underground of root immunity

(2019) Ke Yu et al.   PLANT CELL AND ENVIRONMENT

Initial soil microbiome composition and functioning predetermine future plant health

(2019) Zhong Wei et al.   Science Advances

Rhizosphere-Associated Pseudomonas Suppress Local Root Immune Responses by Gluconic Acid-Mediated Lowering of Environmental pH

(2019) Ke Yu et al.   CURRENT BIOLOGY

Barcoded Pyrosequencing Reveals a Shift in the Bacterial Community in the Rhizosphere and Rhizoplane of Rehmannia glutinosa under Consecutive Monoculture

(2018) Linkun Wu et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Disease-induced assemblage of a plant-beneficial bacterial consortium

(2018) Roeland L. Berendsen et al.   ISME Journal

Plant pathogen effector proteins as manipulators of host microbiomes?

(2018) Nick C. Snelders et al.   MOLECULAR PLANT PATHOLOGY

Feed Your Friends: Do Plant Exudates Shape the Root Microbiome?

(2018) Joelle Sasse et al.   TRENDS IN PLANT SCIENCE

Root exudate metabolites drive plant-soil feedbacks on growth and defense by shaping the rhizosphere microbiota

(2018) Lingfei Hu et al.   Nature Communications

Root exudates drive the soil-borne legacy of aboveground pathogen infection

(2018) Jun Yuan et al.   Microbiome

Legacy of land use history determines reprogramming of plant physiology by soil microbiome

(2018) Xiaogang Li et al.   ISME Journal

Rhizosphere microbiome structure alters to enable wilt resistance in tomato

(2018) Min-Jung Kwak et al.   NATURE BIOTECHNOLOGY

Biological relevance of volatile organic compounds emitted during the pathogenic interactions between apple plants and Erwinia amylovora

(2017) Antonio Cellini et al.   MOLECULAR PLANT PATHOLOGY

Characterization of an antimicrobial and phytotoxic ribonuclease secreted by the fungal wheat pathogen Zymoseptoria tritici

(2017) Graeme J. Kettles et al.   NEW PHYTOLOGIST

The Role of Soil Microorganisms in Plant Mineral Nutrition—Current Knowledge and Future Directions

(2017) Richard Jacoby et al.   Frontiers in Plant Science

Systemic enrichment of antifungal traits in the rhizosphere microbiome after pathogen attack

(2016) Jan-Hendrik Dudenhöffer et al.   JOURNAL OF ECOLOGY

Microbiome Networks: A Systems Framework for Identifying Candidate Microbial Assemblages for Disease Management

(2016) R. Poudel et al.   PHYTOPATHOLOGY

Structure and Function of the Bacterial Root Microbiota in Wild and Domesticated Barley

(2015) Davide Bulgarelli et al.   Cell Host & Microbe

Stability and succession of the rhizosphere microbiota depends upon plant type and soil composition

(2015) Andrzej Tkacz et al.   ISME Journal

Linking Jasmonic Acid Signaling, Root Exudates, and Rhizosphere Microbiomes

(2015) Lilia C. Carvalhais et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Native root-associated bacteria rescue a plant from a sudden-wilt disease that emerged during continuous cropping

(2015) Rakesh Santhanam et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Salicylic acid modulates colonization of the root microbiome by specific bacterial taxa

(2015) S. L. Lebeis et al.   SCIENCE

Engineering Microbiomes to Improve Plant and Animal Health

(2015) U.G. Mueller et al.   TRENDS IN MICROBIOLOGY

Root inoculation with Pseudomonas putida KT2440 induces transcriptional and metabolic changes and systemic resistance in maize plants

(2015) Chantal Planchamp et al.   Frontiers in Plant Science

Associations with rhizosphere bacteria can confer an adaptive advantage to plants

(2015) Cara H. Haney et al.   Nature Plants

Filamentous pathogen effector functions: of pathogens, hosts and microbiomes

(2014) Hanna Rovenich et al.   CURRENT OPINION IN PLANT BIOLOGY

Improved plant resistance to drought is promoted by the root-associated microbiome as a water stress-dependent trait

(2014) Eleonora Rolli et al.   ENVIRONMENTAL MICROBIOLOGY

Expression patterns of FLAGELLIN SENSING 2 map to bacterial entry sites in plant shoots and roots

(2014) Martina Beck et al.   JOURNAL OF EXPERIMENTAL BOTANY

Structure and Functions of the Bacterial Microbiota of Plants

(2013) Davide Bulgarelli et al.   Annual Review of Plant Biology

Rhizosphere microbiome assemblage is affected by plant development

(2013) Jacqueline M Chaparro et al.   ISME Journal

Plants and pathogens: putting infection strategies and defence mechanisms on the map

(2012) Christine Faulkner et al.   CURRENT OPINION IN PLANT BIOLOGY

Increasing antagonistic interactions cause bacterial communities to collapse at high diversity

(2012) Joachim Becker et al.   ECOLOGY LETTERS

The role of flavonoids in root-rhizosphere signalling: opportunities and challenges for improving plant-microbe interactions

(2012) S. Hassan et al.   JOURNAL OF EXPERIMENTAL BOTANY

Defining the core Arabidopsis thaliana root microbiome

(2012) Derek S. Lundberg et al.   NATURE

Pyrolytic and Kinetic Characteristics of the Thermal Decomposition of Perilla frutescens Polysaccharide

(2012) Quancheng Zhou et al.   PLoS One

The rhizosphere microbiome and plant health

(2012) Roeland L. Berendsen et al.   TRENDS IN PLANT SCIENCE

The effects of commensal microbiota on immune cell subsets and inflammatory responses

(2011) Takatoshi Chinen et al.   IMMUNOLOGICAL REVIEWS

Peripheral education of the immune system by colonic commensal microbiota

(2011) Stephanie K. Lathrop et al.   NATURE

Interplant Communication of Tomato Plants through Underground Common Mycorrhizal Networks

(2010) Yuan Yuan Song et al.   PLoS One

Plant-Growth-Promoting Rhizobacteria

(2009) Ben Lugtenberg et al.   Annual Review of Microbiology

Jasmonate signaling in plant interactions with resistance-inducing beneficial microbes

(2009) Sjoerd Van der Ent et al.   PHYTOCHEMISTRY

An ABC Transporter Mutation Alters Root Exudation of Phytochemicals That Provoke an Overhaul of Natural Soil Microbiota

(2009) D. V. Badri et al.   PLANT PHYSIOLOGY

Pattern-recognition receptors in plant innate immunity

(2008) Cyril Zipfel   CURRENT OPINION IN IMMUNOLOGY

The rhizosphere: a playground and battlefield for soilborne pathogens and beneficial microorganisms

(2008) Jos M. Raaijmakers et al.   PLANT AND SOIL

Root-Secreted Malic Acid Recruits Beneficial Soil Bacteria

(2008) T. Rudrappa et al.   PLANT PHYSIOLOGY

Long-distance signalling in plant defence

(2008) Martin Heil et al.   TRENDS IN PLANT SCIENCE